mRNA_M-pyrifera_M_contig125769.5209.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A6I6AAP4_9PLAN (Carbamoyl-phosphate synthase small chain n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AAP4_9PLAN) HSP 1 Score: 338 bits (868), Expect = 1.470e-114 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTRVSS 480
GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMND+TVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTRVSS
Sbjct: 233 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDNTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTRVSS 392
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A6CAK2_9PLAN (Carbamoyl-phosphate synthase small chain n=11 Tax=Planctomycetaceae TaxID=126 RepID=A6CAK2_9PLAN) HSP 1 Score: 305 bits (780), Expect = 3.270e-101 Identity = 141/160 (88.12%), Postives = 150/160 (93.75%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTRVSS 480
GNCTA +V+ LNPDGVFLSNGPGDPEPLTYAI+TIR LLG+VPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPV+NH T QVEITSQNHGFAIDPET PDDVE+TH NMND+TVAGLRHKTH AFSVQYHPEASAGPHDSHYLF+QFF+SI Q RVSS
Sbjct: 233 GNCTAAEVMELNPDGVFLSNGPGDPEPLTYAIDTIRELLGQVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVINHATGQVEITSQNHGFAIDPETKPDDVEITHINMNDNTVAGLRHKTHPAFSVQYHPEASAGPHDSHYLFQQFFESISQARVSS 392
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A518I8K1_9PLAN (Carbamoyl-phosphate synthase small chain n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I8K1_9PLAN) HSP 1 Score: 304 bits (778), Expect = 6.580e-101 Identity = 142/160 (88.75%), Postives = 152/160 (95.00%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTRVSS 480
GNCTA+DVL LNPDGVFLSNGPGDPEPLTYAIETIR LLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPV+N DT QVEITSQNHGFAIDP++MPD+VEVTH NMND+TVAGLRHKT+ AFSVQYHPEASAGPHDSHYLF+QFF+SI Q +VSS
Sbjct: 233 GNCTAQDVLDLNPDGVFLSNGPGDPEPLTYAIETIRGLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVVNQDTGQVEITSQNHGFAIDPDSMPDEVEVTHINMNDNTVAGLRHKTYPAFSVQYHPEASAGPHDSHYLFQQFFESIKQAQVSS 392
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A517W0W9_9PLAN (Carbamoyl-phosphate synthase small chain n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W0W9_9PLAN) HSP 1 Score: 299 bits (765), Expect = 6.330e-99 Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQ-TRVSS 480
G+CTA+DVL LNPDGVFLSNGPGDPEPLTYAIETIR+LL K+PIFGICLGHQLLGLACGCKTFKLKFGHRGANQPV+NHDT QVEITSQNHGFAIDPE+MP DVE+TH NMNDDTVAGLRHKT+ AFSVQYHPEASAGPHDSHYLF+QF++ I TRVSS
Sbjct: 233 GDCTAQDVLELNPDGVFLSNGPGDPEPLTYAIETIRSLLDKIPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVVNHDTGQVEITSQNHGFAIDPESMPADVEITHVNMNDDTVAGLRHKTYPAFSVQYHPEASAGPHDSHYLFRQFYNCISSNTRVSS 393
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A3C0WLX3_9PLAN (Carbamoyl-phosphate synthase small chain n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A3C0WLX3_9PLAN) HSP 1 Score: 263 bits (673), Expect = 3.180e-85 Identity = 116/153 (75.82%), Postives = 141/153 (92.16%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSI 459
G T+++V+ALNPDGVFLSNGPGDPEP+ YAI+TI L+GKVPIFGICLGHQLL LACG KTFKLKFGHRGANQPV+N D+++VEIT+QNHGFA++ ET+PDD+E+TH N+ND+T+AG+RHKTH AFSVQYHPEAS+GPHDS YLF+QF+DS+
Sbjct: 219 GTATSDEVMALNPDGVFLSNGPGDPEPVEYAIKTISELVGKVPIFGICLGHQLLSLACGAKTFKLKFGHRGANQPVMNLDSERVEITAQNHGFAVEEETIPDDLEITHRNLNDNTIAGVRHKTHPAFSVQYHPEASSGPHDSRYLFQQFYDSM 371
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A7C7WZX7_9PLAN (Carbamoyl-phosphate synthase small chain n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7WZX7_9PLAN) HSP 1 Score: 261 bits (667), Expect = 2.990e-84 Identity = 121/157 (77.07%), Postives = 133/157 (84.71%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTR 471
GN ED+LAL PDG+FLSNGPGDPEP+ Y IETIR LLGKVPIFGICLGHQLL LAC KTFKLKFGHRGANQPVL D VEITSQNHGFA+D +T+PDD+EVTH N+NDDTVAG+RHK H AFSVQYHPEASAGPHDSHYLF +F + I + R
Sbjct: 222 GNTPPEDLLALKPDGIFLSNGPGDPEPVEYGIETIRALLGKVPIFGICLGHQLLSLACNAKTFKLKFGHRGANQPVLKLDDGTVEITSQNHGFAVDRDTLPDDLEVTHVNLNDDTVAGIRHKVHNAFSVQYHPEASAGPHDSHYLFDEFIERIVEHR 378
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A517R6D1_9BACT (Carbamoyl-phosphate synthase small chain n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517R6D1_9BACT) HSP 1 Score: 259 bits (663), Expect = 1.010e-83 Identity = 118/149 (79.19%), Postives = 132/149 (88.59%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQF 447
GN +AED+L LNPDGVFLSNGPGDP PL YA+ETIR LLG+ P+FGICLGHQLLGLACG FKLKFGHRGANQPVLN ++ QVEITSQNHGFA+ ++MP+DVEVTH N+NDDTVAG+RH+ H AFSVQYHPEASAGPHDSHYLF QF
Sbjct: 221 GNSSAEDILKLNPDGVFLSNGPGDPRPLNYAVETIRGLLGQTPVFGICLGHQLLGLACGADIFKLKFGHRGANQPVLNRESGQVEITSQNHGFALVADSMPEDVEVTHLNLNDDTVAGIRHRKHNAFSVQYHPEASAGPHDSHYLFHQF 369
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A517TCW6_9PLAN (Carbamoyl-phosphate synthase small chain n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517TCW6_9PLAN) HSP 1 Score: 258 bits (659), Expect = 4.300e-83 Identity = 117/158 (74.05%), Postives = 138/158 (87.34%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTRV 474
GN +A+D+LA PDGVFLSNGPGDP PL YA+ TI+ LLG+VPIFGICLGHQLLGLACG + FKLKFGHRGANQPV NH T+QVEITSQNHGFA+D +++P DVE+THTN+ND+TVAG+RHKTH AFSVQYHPE+SAGPHDS YLF+QF + + +V
Sbjct: 220 GNSSAQDILAAKPDGVFLSNGPGDPRPLEYAVGTIQELLGEVPIFGICLGHQLLGLACGMEIFKLKFGHRGANQPVKNHLTQQVEITSQNHGFALDADSVPADVEITHTNLNDNTVAGIRHKTHPAFSVQYHPESSAGPHDSRYLFQQFREMLSPAKV 377
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A5C6EGN2_9BACT (Carbamoyl-phosphate synthase small chain n=1 Tax=Rubripirellula reticaptiva TaxID=2528013 RepID=A0A5C6EGN2_9BACT) HSP 1 Score: 257 bits (657), Expect = 8.620e-83 Identity = 117/159 (73.58%), Postives = 136/159 (85.53%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFFDSICQTRVS 477
GN +A D++ LNPDGVFLSNGPGDPEPL YAI+TI LLGK PIFGICLGHQLL LACG KTFKLKFGHRGANQPV + TK+VEIT+QNHGFA+D ++MPDD+E+TH N+ND+TVAG+RHK H AFSVQYHPEA+AGPHDSHYLF++F D + S
Sbjct: 219 GNTSAADIMKLNPDGVFLSNGPGDPEPLDYAIKTIAELLGKTPIFGICLGHQLLSLACGAKTFKLKFGHRGANQPVQDLTTKKVEITTQNHGFAVDADSMPDDLEITHLNLNDNTVAGVRHKKHPAFSVQYHPEAAAGPHDSHYLFERFQDLLSAAATS 377
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Match: A0A3B1DPT0_9ZZZZ (Carbamoyl-phosphate synthase small chain n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DPT0_9ZZZZ) HSP 1 Score: 257 bits (656), Expect = 1.260e-82 Identity = 120/150 (80.00%), Postives = 129/150 (86.00%), Query Frame = 1
Query: 1 GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGHQLLGLACGCKTFKLKFGHRGANQPVLNHDTKQVEITSQNHGFAIDPETMPDDVEVTHTNMNDDTVAGLRHKTHAAFSVQYHPEASAGPHDSHYLFKQFF 450
G TAE+VLA PDGVFLSNGPGDP PL YAI TI+NLLGK PIFGICLG QLLGLA GC FKLKFGHRGANQPVLN TKQVEIT+QNHGFAIDP +P+D+EVTH N+ND+TVAG+RHK HAAF VQYHPEASAGPHDS YLF QFF
Sbjct: 224 GTATAEEVLAHKPDGVFLSNGPGDPRPLDYAIRTIQNLLGKTPIFGICLGQQLLGLATGCDIFKLKFGHRGANQPVLNKATKQVEITTQNHGFAIDPAQLPNDIEVTHINLNDETVAGIRHKKHAAFGVQYHPEASAGPHDSQYLFNQFF 373 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125769.5209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125769.5209.1 >prot_M-pyrifera_M_contig125769.5209.1 ID=prot_M-pyrifera_M_contig125769.5209.1|Name=mRNA_M-pyrifera_M_contig125769.5209.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp GNCTAEDVLALNPDGVFLSNGPGDPEPLTYAIETIRNLLGKVPIFGICLGback to top mRNA from alignment at M-pyrifera_M_contig125769:2..484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125769.5209.1 ID=mRNA_M-pyrifera_M_contig125769.5209.1|Name=mRNA_M-pyrifera_M_contig125769.5209.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=483bp|location=Sequence derived from alignment at M-pyrifera_M_contig125769:2..484+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125769:2..484+ >mRNA_M-pyrifera_M_contig125769.5209.1 ID=mRNA_M-pyrifera_M_contig125769.5209.1|Name=mRNA_M-pyrifera_M_contig125769.5209.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig125769:2..484+ (Macrocystis pyrifera P11B4 male)back to top |