mRNA_M-pyrifera_M_contig125703.5193.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: L8HB96_ACACA (tRNA pseudouridine synthase D, putative n=2 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HB96_ACACA) HSP 1 Score: 125 bits (315), Expect = 1.360e-30 Identity = 67/138 (48.55%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 31 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGC-VEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVLV 441
GFVNYYGLQRFGTG+V T VG +L W L+L PR + + + AR+Y+ TGD G R +PR +E+ LL Q+ G +H AAF L +RMLY H+YQS VWN AS RV + G+DK GDLVL+
Sbjct: 404 GFVNYYGLQRFGTGSVATHRVGIALLQGQWKEAADLILQPRTGEEQECESARKYWAETGDINGTLRKLPRQLFIERLLLQGYQKMGKTQHLAAFQTLPRNLRMLYPHSYQSYVWNCMASERVRKYGADKPVVGDLVLL 541
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: F0ZJ83_DICPU (TRUD domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZJ83_DICPU) HSP 1 Score: 122 bits (305), Expect = 2.560e-29 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 31 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGC-VEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 438
GF+NY+GLQRFGTG++ T E+G ++ +W V L+LDPRE + +AR+Y+K+TGDA M+PRG E++LL AL+ G+ + AF+ + +RMLY H+YQS +WN AS+R+ G DK GDLV+
Sbjct: 302 GFINYFGLQRFGTGSIPTYEIGIAMIQNNWKKAVDLILDPREGEREEATKARQYYKDTGDAKTTITMLPRGLNAEKKLLIALKG-GSTNYQDAFYSIPRTLRMLYTHSYQSLIWNLMASQRIEMFGFDKPIVGDLVI 437
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A662WIM2_9STRA (TRUD domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIM2_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.080e-28 Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 7 AASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 438
A +W+S GF+NY+GLQRFGT + T E+GR +L RD+ V LLL P+E D+ + +AR+ F++T D G A R +P + E+ +L L+ G +S A + +RM+Y HAYQS VWN AS R+T+ D GDLV+
Sbjct: 428 AVRSWSSRGFINYFGLQRFGTKAIATHEIGRAILQRDYKRVVDLLLAPQEGDASKIREARQAFQDTQDVGAALRALPPYLIAERAVLQGLRTHGLTSYSTAIQSIPRHLRMMYTHAYQSYVWNTVASERLTQFSRDSPVLGDLVI 572
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A803PZ05_CANSA (TRUD domain-containing protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PZ05_CANSA) HSP 1 Score: 117 bits (292), Expect = 1.670e-27 Identity = 62/148 (41.89%), Postives = 88/148 (59.46%), Query Frame = 1
Query: 4 AAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVLVAE 447
AAASA GF+NY+GLQRFG+G+V T +G ++L +W V ++LDPRE + + AR+Y+K T D G R +PR V ++ + + H A + +RM+Y H+YQS +WN AAS RV + G+D V GDLV E
Sbjct: 296 AAASALGRQGFINYFGLQRFGSGSVPTYLIGSKLLRGEWEAAVNMILDPREGERNTIAMARQYYKETNDIDGTLRQLPRYLVAERAVLQCLKKCPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKHGTDHVVVGDLVYCKE 443
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A1V9ZSP4_9STRA (tRNA pseudouridine synthase D (TruD) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSP4_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.780e-27 Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 1
Query: 7 AASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 438
A +WAS GFVNY+GLQRFGT ++ + VGR +L +D+ G V L+L P+E D+ + +AR +F+ D A RM P V E +L RFG D H A ++ + +RM+Y HAYQS +WN AAS R+ + + GD+VL
Sbjct: 443 AVKSWASMGFVNYFGLQRFGTKSIPSHVVGRTLLRKDFKGAVDLILGPKEGDASKIKEARVHFQQYKDISAALRMFPPFLVAEVAVLEGFSRFGLDAHERAIRNIPTKLRMIYTHAYQSYIWNEAASYRLQKYSNTAPVVGDMVL 587
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: UPI000CED2A92 (pseudouridylate synthase 7 homolog n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=UPI000CED2A92) HSP 1 Score: 116 bits (291), Expect = 2.320e-27 Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 31 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLV 435
GF+NY+GLQRFG+G+V T VG VL +W V ++LDPRE + V+++AR Y+K TGD G R +PR V ++ + + + A + +RM+Y H+YQS +WN AAS RV + G+++V GDLV
Sbjct: 347 GFINYFGLQRFGSGSVPTHHVGAAVLKGEWKEAVDMILDPRESEKNVVNEAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVQKYGTNQVVLGDLV 481
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A5D6YSG9_9STRA (TRUD domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YSG9_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.280e-27 Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 1 NAAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 438
+AA ++W + GFVNY+GLQRFGT +V T EVGR +L RD++ V L+L P+E D+ + +AR F+ D A R +P + E+ LL L+ +G H+ A + +RM+Y H+YQS VWN AS RV++ SD GDLV+
Sbjct: 419 HAAVASWTARGFVNYFGLQRFGTKSVPTHEVGRAILQRDYARVVDLVLQPQEGDATKIAEARARFQADQDVEAALRALPPYLIAERALLQGLKTYGLGAHAQAIQCIPRHLRMMYTHSYQSFVWNMVASDRVSQFASDAPVVGDLVI 565
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: UPI0006449C31 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449C31) HSP 1 Score: 115 bits (289), Expect = 4.100e-27 Identity = 65/142 (45.77%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 31 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDK--HSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVLVAE 447
GF+NYYGLQRFGTG++ T+EVG+ ++ +W V L+L PRE + + QAR+ +K+TGD R +PR + E +L LQ+ DK + AF++L +RMLY H+YQS +WN AS R+ G DK GDLV V E
Sbjct: 285 GFINYYGLQRFGTGSISTNEVGKAIIRGEWQQVVNLILCPREGERPDLQQARQAYKDTGDIAPLIRALPRFMMAEHAVLKGLQK---DKKGYQNAFNNLPRTLRMLYPHSYQSLIWNRMASERIKMFGFDKPVVGDLVSVGE 423
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A5N5H0P9_9ROSA (Multisubstrate pseudouridine synthase 7-like n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5H0P9_9ROSA) HSP 1 Score: 115 bits (289), Expect = 4.770e-27 Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 4 AAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDS---RVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 438
A+ASA GF+NY+GLQRFG+G+V T +G +L +W TV++ LDPRE D V+ +AR Y+K T D G R +PR V ++ + + + A + +RM+Y H+YQS +WN AAS RV + G+D+V GDLV
Sbjct: 331 ASASALGKQGFINYFGLQRFGSGSVPTHHIGASLLRGEWKSTVSMFLDPREGDILFVNVITEAREYYKETNDIEGTLRKLPRHLVSERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVKKYGTDRVVLGDLVF 478
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A251NZU1_PRUPE (TRUD domain-containing protein n=11 Tax=Prunus TaxID=3754 RepID=A0A251NZU1_PRUPE) HSP 1 Score: 115 bits (288), Expect = 5.930e-27 Identity = 57/135 (42.22%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 31 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLV 435
GF+NY+GLQRFG+G+V T +G +L +W TV+L LDPRE + + +AR Y+K T D G R +PR V ++ + + + A + +RM+Y H+YQS +WN AAS RV + G+D+V GDLV
Sbjct: 336 GFINYFGLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGEKNAITEAREYYKETNDIEGTLRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLV 470 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125703.5193.1 >prot_M-pyrifera_M_contig125703.5193.1 ID=prot_M-pyrifera_M_contig125703.5193.1|Name=mRNA_M-pyrifera_M_contig125703.5193.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp NAAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPback to top mRNA from alignment at M-pyrifera_M_contig125703:48..512- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125703.5193.1 ID=mRNA_M-pyrifera_M_contig125703.5193.1|Name=mRNA_M-pyrifera_M_contig125703.5193.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig125703:48..512- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125703:48..512- >mRNA_M-pyrifera_M_contig125703.5193.1 ID=mRNA_M-pyrifera_M_contig125703.5193.1|Name=mRNA_M-pyrifera_M_contig125703.5193.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig125703:48..512- (Macrocystis pyrifera P11B4 male)back to top |