mRNA_M-pyrifera_M_contig125566.5170.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125566.5170.1
Unique NamemRNA_M-pyrifera_M_contig125566.5170.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A6G0W514_9STRA (Raptor_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W514_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.570e-25
Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 1 
Query:   16 RSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLRRS-SPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            R H  WV G  + + G  Y+L+SGSV G+I FWDLR + S ++  +A   PMT+ A H +APV ATG+ +  +K++   G  LA I + + F G+R+ PV+ LAFH HR++ AA  +D +V +Y+
Sbjct:  966 REHSSWVVGTHLAKFGK-YELMSGSVSGEIKFWDLRHTRSSVKTFEAHRSPMTAFAVHSYAPVFATGSHNQFIKVFRQDGDQLALIRYHEGFLGERIGPVSSLAFHPHRLVLAAGATDSLVAIYS 1089
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: W4FBC1_9STRA (Raptor_N domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FBC1_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.090e-24
Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 1 
Query:   16 RSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLR-RSSPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            + H  WV G  + +  S Y+L+SGSV G++ FWDLR   S ++  +A   PMT+LA H FAPV ATG+ +  +K++   G  LA I + + F G+R+ PV+ LAFH HR+L AA  +D ++ +Y+
Sbjct: 1003 KEHTSWVVGAHLYQ--SKYELLSGSVSGELKFWDLRYNKSSVKTFEAHRSPMTALAVHAFAPVYATGSHNQFIKVFRQDGDQLALIRYHEGFLGERIGPVSCLAFHPHRLLLAAGATDSLIAIYS 1125
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A396ZWH4_9STRA (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZWH4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.250e-24
Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 1 
Query:   16 RSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLR-RSSPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            + H  WV G  + +  S Y+L+SGSV G++ FWDLR   S ++  +A   PMT+LA H FAPV ATG+ +  +K++   G  LA I + + F G+R+ PV+ LAFH HR+L AA  +D ++ +Y+
Sbjct: 1199 KEHTSWVVGAHLYQ--SKYELLSGSVSGELKFWDLRYNKSSVKTFEAHRSPMTALAVHAFAPVYATGSHNQFIKVFRQDGEQLALIRYHEGFLGERIGPVSCLAFHPHRLLLAAGATDSLIAIYS 1321
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A024TCL7_9STRA (Raptor_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCL7_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.460e-23
Identity = 50/125 (40.00%), Postives = 81/125 (64.80%), Query Frame = 1 
Query:   16 RSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLR-RSSPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            + H  W+ G  + R  S ++L+SGSV GD+  WDLR + + ++  +A   PMT+LA H+FAP+ ATG+ +  +K++   G  LA I + + F G+R+ PV+ LAFH HR+L AA  +D ++ +Y+
Sbjct: 1011 KEHSSWIVGTHLYR--SKHELLSGSVSGDVKLWDLRYQKASVKTFEAHRSPMTALAVHDFAPLYATGSHNQFIKVFRQDGEQLALIRYHEGFLGERIGPVSCLAFHPHRLLLAAGATDSLIAIYS 1133
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A836CAT4_9STRA (Raptor_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.800e-23
Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 1 
Query:   22 HKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLRRSSPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            H  W+  +   R    ++++S    GD+ FWD+R +  L  +  +  PMT+LAAH   P++A+G+ +  +K+    G +LA I + D F GQR+ PV+ LAFH HR++ AA  +D +V VYA
Sbjct: 1518 HGSWIVSLHFTRGMGGHEMLSACAAGDVRFWDIRMAGSLSAMSVQRSPMTALAAHARVPILASGSHNQFIKVLTLDGETLAVIRYHDGFLGQRIGPVSALAFHPHRLVLAAGATDSIVSVYA 1639
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A2D4BQ72_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ72_PYTIN)

HSP 1 Score: 102 bits (255), Expect = 6.720e-23
Identity = 52/130 (40.00%), Postives = 79/130 (60.77%), Query Frame = 1 
Query:    1 LSSRSRSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLRRSS-PLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            L+   R H  WV  V        Y+L+SGSV G++ FWDLR     ++ ++A   PMT+LA H++AP+ A+G+ +  +K++   G  LA I H + F G+R+ PV+ LAFH HR+  AA  +D VV +Y+
Sbjct:  714 LTCTMREHSSWV--VQTHLYAGKYELLSGSVSGELKFWDLRFPKLSVRSLEAHRSPMTALAVHDYAPIFASGSHNQFIKVFRSDGEQLALIRHHEGFLGERIGPVSCLAFHPHRLYLAAGATDSVVAIYS 841
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A2D4CI46_PYTIN (Regulatory-associated protein of mTOR n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI46_PYTIN)

HSP 1 Score: 102 bits (255), Expect = 6.940e-23
Identity = 52/130 (40.00%), Postives = 79/130 (60.77%), Query Frame = 1 
Query:    1 LSSRSRSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLRRSS-PLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            L+   R H  WV  V        Y+L+SGSV G++ FWDLR     ++ ++A   PMT+LA H++AP+ A+G+ +  +K++   G  LA I H + F G+R+ PV+ LAFH HR+  AA  +D VV +Y+
Sbjct: 1170 LTCTMREHSSWV--VQTHLYAGKYELLSGSVSGELKFWDLRFPKLSVRSLEAHRSPMTALAVHDYAPIFASGSHNQFIKVFRSDGEQLALIRHHEGFLGERIGPVSCLAFHPHRLYLAAGATDSVVAIYS 1297
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A3R6YNF8_9STRA (Raptor_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YNF8_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.330e-22
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 1 
Query:   64 SAYDLISGSVQGDICFWDLR-RSSPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            S Y+L+SGSV G++ FWDLR   S ++  +A   PMT+LA H FAPV ATG+ +  +K++   G  LA I + + F G+R+ PV+ LAFH HR+L AA  +D ++ +Y+
Sbjct:  741 SKYELLSGSVSGELKFWDLRYNKSSVKTFEAHRSPMTALAVHAFAPVYATGSHNQFIKVFRQDGEQLALIRYHEGFLGERIGPVSCLAFHPHRLLLAAGATDSLIAIYS 849
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A5D6YCM0_9STRA (Raptor_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCM0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.490e-22
Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = 1 
Query:   16 RSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLRR-SSPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            R H  WV    +      Y+++SGSV G++ FWDLR   + ++ ++A   PMT+LA H +AP+ A+G+ +  +K++   G  LA I + + F G+R+ PV+ LAFH HR+L A+  +D VV VYA
Sbjct: 1304 REHTSWVVQTHV--YPDKYEMLSGSVSGELKFWDLRYPKNSVKSLEAHRSPMTALAVHNYAPIFASGSHNQFIKVFKSDGEQLALIRYHEGFLGERIGPVSCLAFHPHRLLLASGATDSVVAVYA 1426
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BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Match: A0A485KM52_9STRA (Aste57867_9173 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KM52_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.030e-22
Identity = 48/125 (38.40%), Postives = 79/125 (63.20%), Query Frame = 1 
Query:   16 RSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLR-RSSPLQVVQAESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQRLAPVTGLAFHTHRMLFAAATSDGVVPVYA 387
            + H  W+ G  + +  S Y L+SGSV G++ FWDLR + + ++   A    MT+LA H++AP+ ATG+ +  +K++   G  LA I + + F G+R+ PV+ LAFH HR+L AA  +D ++ +Y+
Sbjct:  985 KEHTSWIVGTHLYK--SKYQLLSGSVSGELKFWDLRYQKTSVKTFDAHRSSMTALAVHQYAPLFATGSHNQFIKVFRQDGEQLALIRYHEGFLGERIGPVSCLAFHPHRLLLAAGATDSLIAIYS 1107
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125566.5170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0W514_9STRA2.570e-2542.40Raptor_N domain-containing protein n=1 Tax=Aphanom... [more]
W4FBC1_9STRA3.090e-2442.40Raptor_N domain-containing protein n=7 Tax=Aphanom... [more]
A0A396ZWH4_9STRA4.250e-2442.40Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A024TCL7_9STRA1.460e-2340.00Raptor_N domain-containing protein n=1 Tax=Aphanom... [more]
A0A836CAT4_9STRA3.800e-2337.70Raptor_N domain-containing protein n=1 Tax=Tribone... [more]
A0A2D4BQ72_PYTIN6.720e-2340.00Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2D4CI46_PYTIN6.940e-2340.00Regulatory-associated protein of mTOR n=1 Tax=Pyth... [more]
A0A3R6YNF8_9STRA2.330e-2244.95Raptor_N domain-containing protein n=1 Tax=Aphanom... [more]
A0A5D6YCM0_9STRA4.490e-2240.00Raptor_N domain-containing protein n=1 Tax=Pythium... [more]
A0A485KM52_9STRA6.030e-2238.40Aste57867_9173 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125566contigM-pyrifera_M_contig125566:114..500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.7
Seed ortholog evalue2.7e-19
Seed eggNOG ortholog112098.XP_008607535.1
Preferred nameRPTOR
KEGG koko:K07204
KEGG Pathwayko04136,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04714,ko04910,ko05206,map04136,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04714,map04910,map05206
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000151,GO:0000182,GO:0000323,GO:0001016,GO:0001025,GO:0001030,GO:0001031,GO:0001032,GO:0001067,GO:0001101,GO:0001156,GO:0001558,GO:0001932,GO:0001933,GO:0001934,GO:0001936,GO:0001938,GO:0002165,GO:0002791,GO:0002792,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005773,GO:0005776,GO:0005829,GO:0006139,GO:0006355,GO:0006359,GO:0006396,GO:0006469,GO:0006725,GO:0006807,GO:0006914,GO:0006950,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0007517,GO:0007552,GO:0007562,GO:0007568,GO:0008047,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008286,GO:0008340,GO:0008361,GO:0008582,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009793,GO:0009886,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010073,GO:0010074,GO:0010154,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010492,GO:0010494,GO:0010506,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010623,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010769,GO:0010770,GO:0010799,GO:0010800,GO:0010817,GO:0010975,GO:0010976,GO:0012501,GO:0014070,GO:0016043,GO:0016070,GO:0016241,GO:0016246,GO:0016441,GO:0016458,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019207,GO:0019209,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019827,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030234,GO:0030291,GO:0030295,GO:0030307,GO:0030422,GO:0030674,GO:0031047,GO:0031050,GO:0031053,GO:0031054,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031461,GO:0031667,GO:0031668,GO:0031669,GO:0031929,GO:0031931,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032101,GO:0032103,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032296,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0033135,GO:0033138,GO:0033554,GO:0033673,GO:0033674,GO:0034470,GO:0034641,GO:0034660,GO:0035069,GO:0035096,GO:0035194,GO:0035195,GO:0035196,GO:0035556,GO:0035770,GO:0036464,GO:0038201,GO:0038202,GO:0040008,GO:0040012,GO:0040017,GO:0040029,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042594,GO:0043085,GO:0043086,GO:0043170,GO:0043200,GO:0043201,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043331,GO:0043434,GO:0043549,GO:0043565,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044877,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045786,GO:0045787,GO:0045793,GO:0045859,GO:0045860,GO:0045886,GO:0045893,GO:0045926,GO:0045927,GO:0045931,GO:0045935,GO:0045936,GO:0045937,GO:0045945,GO:0046483,GO:0046676,GO:0046883,GO:0046888,GO:0048316,GO:0048468,GO:0048477,GO:0048507,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048638,GO:0048640,GO:0048699,GO:0048707,GO:0048731,GO:0048856,GO:0048869,GO:0050678,GO:0050679,GO:0050708,GO:0050709,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050796,GO:0050803,GO:0050807,GO:0050896,GO:0050920,GO:0050921,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051223,GO:0051224,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051270,GO:0051272,GO:0051338,GO:0051347,GO:0051348,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051964,GO:0060033,GO:0060090,GO:0060255,GO:0060284,GO:0061061,GO:0061458,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070887,GO:0070918,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071359,GO:0071375,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071684,GO:0071704,GO:0071840,GO:0071889,GO:0071900,GO:0071901,GO:0071902,GO:0080008,GO:0080084,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0090087,GO:0090276,GO:0090278,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0098727,GO:0098772,GO:0120035,GO:0140098,GO:1900034,GO:1900087,GO:1901360,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902667,GO:1902669,GO:1902680,GO:1902806,GO:1902808,GO:1903506,GO:1903508,GO:1903530,GO:1903531,GO:1903664,GO:1903666,GO:1904396,GO:1904397,GO:1904950,GO:1905809,GO:1990234,GO:1990837,GO:1990904,GO:2000026,GO:2000045,GO:2000112,GO:2001141
EggNOG free text desc.TOR signaling
EggNOG OGsKOG1517@1,KOG1517@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons1
Model size387
Cds size387
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815771.4696963-CDS-M-pyrifera_M_contig125566:113..5001622815771.4696963-CDS-M-pyrifera_M_contig125566:113..500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125566 114..500 +
1692277561.8010833-CDS-M-pyrifera_M_contig125566:113..5001692277561.8010833-CDS-M-pyrifera_M_contig125566:113..500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125566 114..500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125566.5170.1prot_M-pyrifera_M_contig125566.5170.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125566 114..500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125566.5170.1

>prot_M-pyrifera_M_contig125566.5170.1 ID=prot_M-pyrifera_M_contig125566.5170.1|Name=mRNA_M-pyrifera_M_contig125566.5170.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
LSSRSRSHKRWVCGVAIPRVGSAYDLISGSVQGDICFWDLRRSSPLQVVQ
AESDPMTSLAAHEFAPVIATGTRSGTVKLWDFKGGSLAEISHLDDFAGQR
LAPVTGLAFHTHRMLFAAATSDGVVPVYA
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mRNA from alignment at M-pyrifera_M_contig125566:114..500+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125566.5170.1 ID=mRNA_M-pyrifera_M_contig125566.5170.1|Name=mRNA_M-pyrifera_M_contig125566.5170.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig125566:114..500+ (Macrocystis pyrifera P11B4 male)
CTTTCGTCACGGTCACGATCTCACAAACGTTGGGTATGTGGTGTAGCAAT
TCCTCGTGTAGGATCAGCATATGACCTTATTTCTGGATCTGTGCAAGGAG
ACATTTGTTTCTGGGACTTGCGACGATCAAGTCCGCTCCAGGTTGTGCAA
GCAGAATCAGATCCGATGACATCTCTCGCTGCACATGAATTTGCTCCAGT
GATTGCAACAGGGACAAGATCTGGCACAGTAAAACTGTGGGATTTCAAAG
GAGGATCTCTTGCTGAAATCTCACATCTAGATGATTTCGCAGGGCAACGA
CTTGCACCAGTGACAGGCTTGGCATTCCACACCCATCGCATGCTTTTCGC
AGCTGCAACTTCCGATGGAGTTGTTCCTGTCTATGCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125566:114..500+

>mRNA_M-pyrifera_M_contig125566.5170.1 ID=mRNA_M-pyrifera_M_contig125566.5170.1|Name=mRNA_M-pyrifera_M_contig125566.5170.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig125566:114..500+ (Macrocystis pyrifera P11B4 male)
CTTTCGTCACGGTCACGATCTCACAAACGTTGGGTATGTGGTGTAGCAAT
TCCTCGTGTAGGATCAGCATATGACCTTATTTCTGGATCTGTGCAAGGAG
ACATTTGTTTCTGGGACTTGCGACGATCAAGTCCGCTCCAGGTTGTGCAA
GCAGAATCAGATCCGATGACATCTCTCGCTGCACATGAATTTGCTCCAGT
GATTGCAACAGGGACAAGATCTGGCACAGTAAAACTGTGGGATTTCAAAG
GAGGATCTCTTGCTGAAATCTCACATCTAGATGATTTCGCAGGGCAACGA
CTTGCACCAGTGACAGGCTTGGCATTCCACACCCATCGCATGCTTTTCGC
AGCTGCAACTTCCGATGGAGTTGTTCCTGTCTATGCTCTTTCGTCACGGT
CACGATCTCACAAACGTTGGGTATGTGGTGTAGCAATTCCTCGTGTAGGA
TCAGCATATGACCTTATTTCTGGATCTGTGCAAGGAGACATTTGTTTCTG
GGACTTGCGACGATCAAGTCCGCTCCAGGTTGTGCAAGCAGAATCAGATC
CGATGACATCTCTCGCTGCACATGAATTTGCTCCAGTGATTGCAACAGGG
ACAAGATCTGGCACAGTAAAACTGTGGGATTTCAAAGGAGGATCTCTTGC
TGAAATCTCACATCTAGATGATTTCGCAGGGCAACGACTTGCACCAGTGA
CAGGCTTGGCATTCCACACCCATCGCATGCTTTTCGCAGCTGCAACTTCC
GATGGAGTTGTTCCTGTCTATGCT
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