mRNA_M-pyrifera_M_contig12556.5169.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12556.5169.1
Unique NamemRNA_M-pyrifera_M_contig12556.5169.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: D7FNP1_ECTSI (Similar to WD repeat domain 49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP1_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 1.190e-56
Identity = 97/141 (68.79%), Postives = 113/141 (80.14%), Query Frame = 2 
Query:    5 EDTHEAADLRGSYSMPVHVDAVSRVSYATDLSAVLTCGVDGKIHFVDLGKRVVLRTFDGHADRAVFAFAYCRRHRFAVSAGMGREVMFWNPYTMDILARGEGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQV 427
            +DT EAADL G+YS+P+H  A+S V Y  DL+A +TCGVDGKIHF DL KR   RTF GH DR VFAFAY +RHRF VSAGMGR V+FWN YTM +LAR +GH +NVRHCLVDD +DRVIT+SA+K VRCWDS TF CIQ+
Sbjct:   55 QDTREAADLHGNYSLPLHSGAISCVGYVADLNATVTCGVDGKIHFFDLTKRRTTRTFMGHVDRPVFAFAYSKRHRFVVSAGMGRAVVFWNSYTMHVLARRDGHAANVRHCLVDDRSDRVITISADKAVRCWDSATFRCIQI 195
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BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A6H5LB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB52_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 4.430e-49
Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = 2 
Query:  248 MGREVMFWNPYTMDILARGEGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQVFRDTRTHRPDDMVTAALWDGGKSSLILAGSRLGAWKNVGAIQFTTRTHEAPVTAALYNTNFHQ 616
            MGR V+FWN YTM +LAR +GH + VRHCLVDD +DRVIT+SA+K VRCWDS TF CIQ F+D R HRPDD +TAALWD  +SSL++AGSRLG WKN GAIQ +  +HEAPVTAALYN +FHQ
Sbjct:    1 MGRAVVFWNSYTMHVLARRDGHAATVRHCLVDDRSDRVITISADKAVRCWDSATFRCIQSFKDHRMHRPDDTITAALWDHSRSSLVVAGSRLGVWKNKGAIQSSKHSHEAPVTAALYNWHFHQ 123
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BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A2R5GN79_9STRA (WD repeat-containing protein 64 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GN79_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.380e-23
Identity = 62/195 (31.79%), Postives = 105/195 (53.85%), Query Frame = 2 
Query:   56 HVDAVSRVSYATDLSAVLTCGVDGKIHFVDLGKRVVLRTFDGHADRAVFAFAYCRRHRFAVSAGMGREVMFWNPYTMDILARGEGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQVF--------RDTRTHRPDDMVTAALWDGGKSSLILAGSRLGAWKNVGAIQFTTRTHEAPVTAALYNTNFHQ 616
            H D V++V Y   LS+++TC +D  ++  DL +  + RTF  H  +AV++F +C   +   S+G+ R ++ W+PY+   +A   GH S+V    V+D+N++++++S++ TV+ WD     C+Q             R       VT   +     SL+ A ++L  +      + + RTH  PV AALYN+NFHQ
Sbjct:  349 HTDHVTQVDYVGGLSSLVTCSLDATVNVFDLERARLKRTFTQHK-KAVYSFTWCAGSKVIASSGLERHIVLWSPYSRRSVASLYGHTSSVIKVEVNDDNNQLLSLSSDNTVKIWDIRNHKCVQTIGIGMAASRAQQRESAGQPSVTCMTYVRKHKSLVAASNKLKIFPLRPPSETSLRTHNRPVVAALYNSNFHQ 542
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BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A1S8W1I2_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W1I2_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 2.460e-17
Identity = 55/194 (28.35%), Postives = 100/194 (51.55%), Query Frame = 2 
Query:   56 HVDAVSRVSYATDLSAVLTCGVDGK----IHFVDLGKRVVLRTFDGHADRAVFAFAYCRRHRFAVSAGMGREVMFWNPYTMDI-LARGEGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQVFRDTRTHRPDDMVTAALWDGGKSSLILAGSRLGAW--KNVGAIQFTTRTHEAPVTAALYNTNFHQ 616
            H D   +V Y  DL A+++C  D +    +  +DL ++  +        + V +FAYCR     V+ G  R++  WNP+ +   +A  +GH S +    V++ N +VI++S +K ++ WD     C+Q   DT  HRPDD+++A +++     ++     L  +  K   AI    ++H+ P+ + +YN+ F Q
Sbjct:  356 HGDWAVKVKYVPDLRAIISCSPDPRESLVVAIMDLNRKWQVHI--SPVSKGVNSFAYCRFPVTLVTGGTDRQLRLWNPHRLHHPMAAMKGHNSPITDITVNELNGQVISLSVDKNIKIWDIRKQQCLQTLVDTDFHRPDDIISAVMFNPHSRKIVTGTYALKIYNLKEQTAITENPKSHDFPIRSVMYNSTFKQ 547
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BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A2R5G3L2_9STRA (WD repeat-containing protein 64 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3L2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.450e-16
Identity = 63/217 (29.03%), Postives = 108/217 (49.77%), Query Frame = 2 
Query:   41 YSMPVHVDAVSRVSYATDLSAVLTCGVDGKIHFVDLGKRVVLRTFDGHADRAVFAFAYCRRHRFAVSAGMGREVMFWNPYTM----DILARGEGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQVFRDTRTHRPDDMVTAALWDGGKSSLILAGSRLGAWKNVGAIQFTTRTHEAPVTAALYNTNFHQA*LLSLGMP---WETFTSGSS 670
            + + VH D  S++     + A+++C  DG I F+D+ +R VLR F  H ++AV+ FA+  R++   SAG+ R ++FWNP+T     +I    E     +  C  + E+ ++I ++     R WD  TF C+Q    T        ++  ++D     L++    L        +    ++H+ PVTAAL+N +FHQ  + + G     W+ FT   S
Sbjct:  547 FRLRVHQDRGSKILIDDTIGAIVSCSSDGVIAFLDIERRRVLRRFQCH-EKAVYDFAWIARNKLIASAGIERRILFWNPFTCAVNREINDPDEIDAPILGLCFNETEH-QLIALNERNVARVWDLVTFYCVQQI--TFAGPGLKSLSGMVFDEHLQQLVVFDRELHVRHAKVVLPAARKSHQFPVTAALFNESFHQL-VSAAGTEIHVWDVFTGSLS 758
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BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A8C7P627_ONCMY (Uncharacterized protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7P627_ONCMY)

HSP 1 Score: 85.5 bits (210), Expect = 3.250e-14
Identity = 50/202 (24.75%), Postives = 100/202 (49.50%), Query Frame = 2 
Query:   41 YSMPVHVDAVSRVSYATDLSAVLTCGVDGKIHFV----DLGKRVVLRTFDGHADRAVFAFAYCRRHRFAVSAGMGREVMFWNPY-TMDILARGEGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQVFRDTRTHRPDDMVTAALWDGGKSSLILA----GSRLGAWKNVG-AIQFTTRTHEAPVTAALYNTNFHQ 616
            + +P H D + ++ Y  +L+A+ TC    +   +       ++  ++T + H  + +  F Y       V+    R V  WNPY T    ++ +GH + + H  V+  ++++I+VS +K VR WD     C+Q  +    +     +T+  ++   +++++A    G   G+ ++   ++   T +HE P+ AALYN+NF Q
Sbjct:  393 FRVPSHNDWIHQIRYIPELNAIATCCAADQTSMILTTLPHSRKCKIQTANFHMQKGILCFDYSPELNVLVTGCFDRVVRVWNPYVTNQATSQMKGHCTIITHIAVNGRDNKIISVSKDKNVRVWDLQDSVCLQNIQSRNVNMGCFPITSTYYNHTSNTMVMATYLIGVLRGSMEDANCSVPTATTSHEQPLCAALYNSNFKQ 594
[Close]
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A8C7VDA6_ONCMY (Uncharacterized protein n=4 Tax=Salmoninae TaxID=504568 RepID=A0A8C7VDA6_ONCMY)

HSP 1 Score: 85.5 bits (210), Expect = 3.310e-14
Identity = 50/202 (24.75%), Postives = 100/202 (49.50%), Query Frame = 2 
Query:   41 YSMPVHVDAVSRVSYATDLSAVLTCGVDGKIHFV----DLGKRVVLRTFDGHADRAVFAFAYCRRHRFAVSAGMGREVMFWNPY-TMDILARGEGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQVFRDTRTHRPDDMVTAALWDGGKSSLILA----GSRLGAWKNVG-AIQFTTRTHEAPVTAALYNTNFHQ 616
            + +P H D + ++ Y  +L+A+ TC    +   +       ++  ++T + H  + +  F Y       V+    R V  WNPY T    ++ +GH + + H  V+  ++++I+VS +K VR WD     C+Q  +    +     +T+  ++   +++++A    G   G+ ++   ++   T +HE P+ AALYN+NF Q
Sbjct:   64 FRVPSHNDWIHQIRYIPELNAIATCCAADQTSMILTTLPHSRKCKIQTANFHMQKGILCFDYSPELNVLVTGCFDRVVRVWNPYVTNQATSQMKGHCTIITHIAVNGRDNKIISVSKDKNVRVWDLQDSVCLQNIQSRNVNMGCFPITSTYYNHTSNTMVMATYLIGVLRGSMEDANCSVPTATTSHEQPLCAALYNSNFKQ 265
[Close]
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A7S1SW51_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SW51_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 8.110e-14
Identity = 34/105 (32.38%), Postives = 62/105 (59.05%), Query Frame = 2 
Query:  305 EGHVSNVRHCLVDDENDRVITVSAEKTVRCWDSNTFCCIQVFRDTRTHRPDDMVTAALWDGGKSSLILAGSRLGAWKNVGAIQFTTRTHEAPVTAALYNTNFHQA 619
            +GH ++V    +++ ++++I++S +KT++ WD     C+Q F D  T+RP++ +TA ++D  K  L+   + L  W     I  T+  H APV+  LY+ NF +A
Sbjct:    4 QGHNASVLRVAINERDNQIISMSVDKTIKVWDIRNHKCMQTFHDDDTYRPENTITAMMYDNTKRWLVTGNTTLKTWPLRSVINKTSGAHSAPVSKVLYSPNFSEA 108
[Close]
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A3N0XVP3_ANAGA (WD repeat-containing protein 49 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XVP3_ANAGA)

HSP 1 Score: 78.6 bits (192), Expect = 6.670e-12
Identity = 59/190 (31.05%), Postives = 84/190 (44.21%), Query Frame = 1 
Query:  625 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGPRQV 1194
            VVS      V VW +ETG      F GAHG S ++CM FDSS RRL+TG  DG +KMWNF+NG+ ++            GK  E+    Y K +R+      E+V +  WD+ + I+ + ++ + Q            ++ P   +  D R                      GH  DIL IA C P  +
Sbjct:  924 VVSCSEGSVVKVWDVETGAQMF-EFGGAHGESAITCMVFDSSGRRLVTGGRDGCLKMWNFNNGQCVKILKR-------DGKCAEICDCLYLKLHRN------EFVISVGWDRRIDIY-LASKEETQ-----------KIQGPKPYWQDDVR---------------------NGHIEDILCIAQCTPHHL 1066
[Close]
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: W5LW61_LEPOC (WD40 repeat domain 95 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LW61_LEPOC)

HSP 1 Score: 76.6 bits (187), Expect = 1.710e-11
Identity = 58/187 (31.02%), Postives = 78/187 (41.71%), Query Frame = 1 
Query:  625 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGP 1185
            VVS      V VW  +TG      F  AHG S ++CM FD S RRL+TG  DG +K+WNF+NG  L+            GK  EV    Y K NR +      YV    WD+ + ++           FQ  +++ + ++ P   +  D R                      GH  DIL IA C P
Sbjct:  144 VVSCTEGSVVKVWDFDTGGQVF-EFGDAHGHSAITCMTFDISGRRLVTGGRDGCLKIWNFNNGHCLKILKK-------EGKSDEVCDCTYVKVNRSN------YVMAVGWDRRIDMY-----------FQDSNDDVHHIQNPQPYWQDDLR---------------------SGHKEDILCIAQCPP 284
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP1_ECTSI1.190e-5668.79Similar to WD repeat domain 49 n=1 Tax=Ectocarpus ... [more]
A0A6H5LB52_9PHAE4.430e-4969.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GN79_9STRA1.380e-2331.79WD repeat-containing protein 64 n=1 Tax=Hondaea fe... [more]
A0A1S8W1I2_9FUNG2.460e-1728.35Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
A0A2R5G3L2_9STRA6.450e-1629.03WD repeat-containing protein 64 n=1 Tax=Hondaea fe... [more]
A0A8C7P627_ONCMY3.250e-1424.75Uncharacterized protein n=1 Tax=Oncorhynchus mykis... [more]
A0A8C7VDA6_ONCMY3.310e-1424.75Uncharacterized protein n=4 Tax=Salmoninae TaxID=5... [more]
A0A7S1SW51_9CHLO8.110e-1432.38Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A3N0XVP3_ANAGA6.670e-1231.05WD repeat-containing protein 49 n=1 Tax=Anabariliu... [more]
W5LW61_LEPOC1.710e-1131.02WD40 repeat domain 95 n=1 Tax=Lepisosteus oculatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12556contigM-pyrifera_M_contig12556:1242..8073 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score167.5
Seed ortholog evalue1.2e-38
Seed eggNOG ortholog2880.D7FNP1
Preferred nameWDR64
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
EggNOG OGsKOG0274@1,KOG0274@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1196
Cds size1194
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815771.3584476-CDS-M-pyrifera_M_contig12556:1241..14631622815771.3584476-CDS-M-pyrifera_M_contig12556:1241..1463Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 1242..1463 +
1692277561.722226-CDS-M-pyrifera_M_contig12556:1241..14631692277561.722226-CDS-M-pyrifera_M_contig12556:1241..1463Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 1242..1463 +
1622815771.369265-CDS-M-pyrifera_M_contig12556:1898..21001622815771.369265-CDS-M-pyrifera_M_contig12556:1898..2100Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 1899..2100 +
1692277561.7365677-CDS-M-pyrifera_M_contig12556:1898..21001692277561.7365677-CDS-M-pyrifera_M_contig12556:1898..2100Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 1899..2100 +
1622815771.37948-CDS-M-pyrifera_M_contig12556:2866..30661622815771.37948-CDS-M-pyrifera_M_contig12556:2866..3066Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 2867..3066 +
1692277561.7480688-CDS-M-pyrifera_M_contig12556:2866..30661692277561.7480688-CDS-M-pyrifera_M_contig12556:2866..3066Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 2867..3066 +
1622815771.3913722-CDS-M-pyrifera_M_contig12556:4596..46581622815771.3913722-CDS-M-pyrifera_M_contig12556:4596..4658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 4597..4658 +
1692277561.7568345-CDS-M-pyrifera_M_contig12556:4596..46581692277561.7568345-CDS-M-pyrifera_M_contig12556:4596..4658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 4597..4658 +
1622815771.404295-CDS-M-pyrifera_M_contig12556:5637..57671622815771.404295-CDS-M-pyrifera_M_contig12556:5637..5767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 5638..5767 +
1692277561.765803-CDS-M-pyrifera_M_contig12556:5637..57671692277561.765803-CDS-M-pyrifera_M_contig12556:5637..5767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 5638..5767 +
1622815771.4171197-CDS-M-pyrifera_M_contig12556:6843..69481622815771.4171197-CDS-M-pyrifera_M_contig12556:6843..6948Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 6844..6948 +
1692277561.777439-CDS-M-pyrifera_M_contig12556:6843..69481692277561.777439-CDS-M-pyrifera_M_contig12556:6843..6948Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 6844..6948 +
1622815771.4289362-CDS-M-pyrifera_M_contig12556:7800..80731622815771.4289362-CDS-M-pyrifera_M_contig12556:7800..8073Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 7801..8073 +
1692277561.7862859-CDS-M-pyrifera_M_contig12556:7800..80731692277561.7862859-CDS-M-pyrifera_M_contig12556:7800..8073Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12556 7801..8073 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12556.5169.1prot_M-pyrifera_M_contig12556.5169.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12556 1242..8073 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12556.5169.1

>prot_M-pyrifera_M_contig12556.5169.1 ID=prot_M-pyrifera_M_contig12556.5169.1|Name=mRNA_M-pyrifera_M_contig12556.5169.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=398bp
PGGHPRGGRPERELLNAGTRRRRVPSFVRDRPQRSANLWRGRQDPLRRPR
QAGSAPNVRRSRGPRRLRLRLLQAPSFRRFSWHGSRGDVLEPVHHGHPGE
GGGARVEREALPCRRRERPSHYRLRGEDRALLGQQHLLLYSGVQGHPDAP
ARRHGDSRSLGRRQELTDIGRQQARSVEKRRGHTVHHADTRGARHRSAVQ
HQLSSGMIVVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSS
ERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCK
DNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTP
SRIFPRDHRLRYGGTHGGSHGGGRGAQSPGEGHSADILAIAHCGPRQV
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mRNA from alignment at M-pyrifera_M_contig12556:1242..8073+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12556.5169.1 ID=mRNA_M-pyrifera_M_contig12556.5169.1|Name=mRNA_M-pyrifera_M_contig12556.5169.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6832bp|location=Sequence derived from alignment at M-pyrifera_M_contig12556:1242..8073+ (Macrocystis pyrifera P11B4 male)
CCCGGAGGACACCCACGAGGCGGCCGACCTGAGAGGGAGCTACTCAATGC
CGGTACACGTCGACGCCGTGTCCCGAGTTTCGTACGCGACCGACCTCAGC
GCAGTGCTAACCTGTGGCGTGGACGGCAAGATCCACTTCGTCGACCTCGG
CAAGCGGGTAGTGCTCCGAACGTTCGACGGTCACGCGGACCGCGCCGTCT
TCGCCTTCGCCTACTGCAGGCGGTGAGAAAAATTTAGTATTGTCATTTGG
TTTCGCCAACACCCTGTGAGATAACACGAAGTCGCTGCTGCTGTTTATAT
TACTATATGTAGAACGATACACGACGCATCTCATCTATAGGAGAAGAAGA
ATTGATCCAACCCCTTGCTTTGAGTTGACCCGTGTTTTCCCATTCATCGA
GCTCTCCTTCGTTTTAGTCTATGCACGACTCTTCTTGCTCTATATTTAGC
GCACGGTTCCCTCACTTGACTGTTCGTGGGTTTTTTTTCGCCACCGGCGG
AGACGTCCATAAAAAAGCACCTGTACCTAGTGATGCCCAGCCGGCGTTAC
ATATACCAAGCACTCGCGAAAAGCAACATCGACGGTAAAAACCGCCCCGC
GGCCCTTGCTTGCTCTTATGTTACTTTACGGGCATCGAAACGAAATTGAA
TCAAAAGCCATCGTTTCGCCGTTTCAGCTGGCATGGGTCGAGAGGTGATG
TTCTGGAACCCGTACACCATGGACATCCTGGCGAGGGGGGAGGGGCACGT
GTCGAACGTGAGGCACTGCCTTGTCGACGACGAGAACGACCGAGTCATTA
CCGTCTCCGCGGAGAAGACCGTGCGCTGCTGGGACAGCAACACCTTCTGT
TGTATTCAGGTGGTGAAAAAAAGGCAAAGCTGAGAAAGAGAGGAAAGGGC
TCAACCCGGGCGCAGAGTAGTGAATCGGGGGCGGGGGAGGGAGGGAGGGA
GGGAGGGAGGCTGTCGTATACGGGTGATAACACGTTCTGTTGCATCCAGG
TGAAGAGCAGAGCCGCAAAAGAAGGGCAAGGGTTGCACCCGGCACAAATT
TCAGTGCACCGTAAAAAAAGAGGGCGGGGAGGGGGAGAGGGATGGAGGGG
GGGAAGGATGAAGGGAGAGAGGGAGTAGTCAGATGGGTAACATTAAAAAA
AAAGCTGCGCCGGGGGGAGGGGGTTAACAGCAAGTCGAGACAGCCCAAAG
TACACGCCTGAATAGGGCAAGCTGTGTTTCACCCCTTCCTTGCCTCGTCG
ACTTGCGTCCCTCTGTGGGTGTCAAGTGATGCTATCTATTAGCATACACC
TCGTCGAACACCACTGTTCTTGCGCGTTCACTACAAGAGTCAGGTCACTC
AATGGTTGACACAAAGTTCCCTCCAAGAAAAATATCGAAAACAGATGAAC
AAAAATATACCAGAGGACACTTTTTTTACATTTTTTCGCTGCCAACACTT
TTTTCTTCTCTAGGGCAACAACCGAAAGAAAAGGACACCTGTAAAAAAAA
CAACGCGTACGATATAATATGTACGATACAGCAGAACAACACAACAGCAG
CAGTGCCTGAAAACAAAATTGCAGACCAACCTTTTCAACTTATATGATGG
ACCTAACCGGCCCGGTCACCGGCAGGTGTTCAGGGACACCCGGACGCACC
GGCCAGACGACATGGTGACAGCCGCTCTCTGGGACGGCGGCAAGAGCTCA
CTGATATTGGCCGGCAGCAGGCTCGGAGCGTGGAAAAACGTAGGGGCCAT
ACAGTTCACCACGCGGACACACGAGGCGCCCGTCACCGCAGCGCTGTACA
ACACCAACTTTCATCAGGCATGATTGTTACACCGCAGAGTAGCAGGATAG
GATAGGATAGGATAGTACGAGAGAAGACTAGCTTTTTAGCATTAAAACAA
CTATTTCGAGTGAAAGAAGTCGAGCTGTTACCTTTTACACAGGTTGACAA
GAACAAACAAATAAACAAAACAACAAGAGTACATAGGAACACTACAGTAC
ACCCCCCTTTTTGTCGAGCTGGCTGAATTGAATCTGTATGTTGCTTGATG
TTTTTGGAAGGGATGTTACGACTGCTGAGCTCGATATACCTTGGCACGGT
TTTTGCTGATTCTTCACGTTCGCTGATTCTGATGATTTTTAGTGCAACCT
TCCACATCAATCAATCAACCAATGCACGCAAGCTTTTGACGAACCTTCCA
TCTAACTTTCACGCAAGTGCGACGATAGGTATAAGCATATTATAGCGCGA
GCTCCTACAATAGTTGTCGACACGCTATACTATCTTAGTGATTGGGTGTG
ATAGGGTTATATTATACTGCTGGGGGCGAGGGTGAGGGGTGAACGGGGGT
GGGTGGGCGGGTGGGCGGGTGGGGCCGGGCGGGGCGGGGCGCAGATGCGG
TGTCCGCTATTATTAAACGTCGGTAAGAATGTGGAGAGAGAGAGAGAGAG
AGATTTGGAGCAATTGTTTTGCGCGATGAAAGCTGTTCGCGATGGATCGC
TTCCACCGGGGCGTACGCCATCGCATGCATACCTGACGTATAAGAAGGCG
TGCTCTCCTGAGATAGTATAGGTTCTTTCGCCCTTTTTCACCGAGGACGG
TTGTTTGCGTTTGCATCGAGGCCCCTGCGGGGCCATCGTGTTGCCGCCTG
AGTGGCCTCCTTTTTTTTTCAAGGTAGCGGGTCCAAGCCAGCGACCAAAC
CCCAATCGTTTTCTCTAGCCGCCTCGTCCTGTTTCTCTTGTTCTCGTAAG
AAGCAATACTGGTACCGATTAAATCCATCGACCTCCTGTGCGCACTTTGT
TTACTTCGTCGCAACACCGTCGGAACGTATATACATATTACGGGGGTCCA
TAGTTAATAGGTCCTATGGTACACACAAAAACCTATATATTTATCTATTT
TTACTAACAAAATTTGGTCCCGTTAACTATCGACCCCCGTAGTAGTGTAT
AGACCAGATCGTACCAGGCATGAATTTAAAGCGCTCGGTGATGGGAAGAA
TAACCGCACCTATGATATTTCTACTCTCTATTGCCAAATTTAATCAACCC
ACACCAGCTTAAGTCAATAATTAATTTATTTAATTGCATCCACCCCTGCC
CATCTTATATACCAGGTATATATATAGATATAGATATTTCTGCTTTGGGT
GCCCGGGACAATGACTATTACGGGGGTCAATAGTTAATAGGACCTATGGT
ATACATAAAAACCTATATATACCTATTTTTACTAACGATATTTGGTCCTA
TTAACTATGGACCCCCGTAATATATGTTAGTTTTACAACGTTGTTTGTTC
GCGTTACCCCCCTTCCATTCCCCCGACGGTCTTGGCGATGGATGCCACGT
AAAAGGTTGTCTCTGGGGATGCCATGGGAAACGTTCACGTCTGGCTCATC
GAGACCGGCCAGCTCACGTTCAGGCGCGCACCACTGTTGTACATACTGCT
ATGTATTTTTGGTTGTTGTTCGTTTTGTTTTTGTTCTGATCCAGTTGGTT
GTGTTCGCCCTGTTTACCCATCTCCGTCTCAATCGTAACTCAGGTCCGTG
GGCACGTGGTAGACTCTTCTCTTCCCTCCCCACTGCGATGCGCACCTTGC
ATTTGTATCGCGAGAAGGGGTTCAGCTTTTTCTTACCTCGTCTACAAGAT
CATACGTATTGCTGTATCGTGGGTCGGGTCGGATCTCCCACGTATATACG
TACTCGTATGCCACGGGACTCCATGGTTCCGCGCTCGAGAGTTTGAAGCG
TTTCTTCCGTGTTCGAAGCGTTTCTTCCGTGAATTGTGTGAACAGAAGCT
TCTTGCAGTCTATCGCCTATTATGTGTGCTTACTCGTTTTTTTTTTGTAT
CGAGTATTTCATCGTCCGCGAGTGTACATTCTTCCGCAAGACAAGGCTGG
AGATGTGGCTGATCCTTTCCTTCTGGTGGTGGTCTAGAACTACAGAAAAG
CTCGGGTCACGAAATGTTCAAGTACGTGGTAGATGTAGCAAAGATATGTC
CCATTCCATGCTCCGGGATCGTCCCAGCTGGCTGTGGCTGAAGGGTTTAG
GGGGGGGCGAGGCCATGACTCCAGTTGCTTCACCCCGTGGTGGTTAGTCT
GTCTGTTGGTTAGCTGGTTAGTTACTTGGTTGGTTGATTGGTTGCTTTGT
TAATTGGTTCGCTTGCTTTGTTGATTGATTGCTTTGTTGATTGATTGCGG
TGTTGATTGGTTGGCAATGAGTTCAAGTCAGCAGAACTGCTGCCTAAAAA
ATCGTAACAAAACAATTGCCTGGTTCAAGAACAAGGACCATCGCCGCTGC
CGTCGTCCAGCGCGGTCCAGACACGTTGCTCTATCGAAACGATCTCGCCC
CGACCGAATTTATTTCTCGTACCGCCCGGGTTGATCGCGGCTGGAGATGT
TGCAGGTTTGCCGGTGCGCACGGGTCCTCCAAGATGAGCTGCATGTGCTT
CGACTCGTCGGAGAGGAGACTTCTGACTGGTGCCAGCGATGGAGCCGTCA
AAATGTGGAACTTCAGCAACGGGAAAGTAAGTGCCAGGGGGGGGTGTACT
CATTATCATGCATGGCCGTAGTCGTATGACCATAGACCATCGCATCCCTA
CAATGCCGGGACGGGGAACATCGGGTTTTCACCGACCAGGAAGGCATTGC
TTCTCGCACCAAGCGAGAAGGGCCGTGAGGTGTCTGGCGAGTCGAATGAA
GGGCGAACCGTTCGTTTACAAAGGTCAAACCACTGAGCCACTGAGTCAGC
TGCATCCTACTAAGAACCGCTTGTGAGGCGGACGTGCACATGGATGACAG
CTTCAACGAGTTAATCTATTTTTCGTTGTGGCCACTTCTAGAAACAGCAA
TGGGGGTCCCACATAACTGGCTCGTCGGTGCCTTACCGTAAACACTACGT
AACGCGATCATTCCCCTTGTGCAGGGAGGGGGGTCAGCTAGACGATCTCG
AGGGAAGGGTTTGGGCATATCCGCTGGCCCCTCGTCGGGAGTGAGAAGGA
GGCGTTCTACATAGTTAACGGGACCAAATTTTGTTAGTAAAAATAGGCAA
ATATACAGGTTTTTATGTACACCATAGGTCCTGTTAACTATGGACCCCCG
TAATAATAGCCAACAACAACGTATGGCGTCGGCGTGTGTCGCACGTTCTT
TTGTTTAATGCCGCTGTTTTTATCACTCGTTTATGATCGTGGGTACGTAC
GGCAATCCGATCCCAAGCAAAGGGGGGTTCACTCGAGAAACCATTTTCCT
GCCTCAGCTGGAGGCGGGGGGGAACCAATCACCCGCAAATAGATCGTCGA
CTATATACTGCACTTGCCGAGACTTTGAAACGCTACGTACAACAACAAGA
AGTATTCGTTCATGAAAATAGAATGGGGGGTACGCAGCAACCAACCACTG
GAAGAGTCGTCGGGTTTATTTTCCTTTTGGCGCACGCACTCACGGGAGTA
CGAACAGTTGCTTGTATGACAGTTTCCTCACATACCCTTGCTTTCGTCTT
GGACTCCCCCACATTTTTGTGTCCGCTCTTTCGATCACCTCTCCCCCCCC
ATCCCCCCTCCACCGCCCCGCGATATGCCACCCCACGCGGTACCTTCCGA
AGGAGCTCCAGTTTTTCGGCTCTGGGGCTAAGTCAGGGGGGCTCACGGGG
AAAGGGAAGGAGGTATCGGGAATCGCATACTGCAAGGACAACAGGGACTC
GGAGCACGTGCGGTTCAAAAGGAGTTCTGGTAGATATGTATATGTGTTAA
TACGTACCTGGTACGCATGTACGAGCCTTAGTAGTTGGGCGTCGTCTCTG
CGCACACGACCTTCGCATCAAAAAGTGTACATACTACCGAGTGTTTCTAC
GCTGCACTACCCTTTTGCGTCGTCGGCAGGATGTGATCTGCCTCACCGGT
CGCGATAAACAGACTGGAAACTACTGCCGTGGAACGGTCTTGTCGCTGCG
TACGCACATATACTACAGCCTTCCGAAATGTTCAAAATGTGTTAAGTGGC
GTTCTTATTGTCCTACTACTGCTGCAGGTGTATAAAACGTCGTGTGCGAG
GTACGTAAACACTCGTATCGTAGTTTCAAACAGGTGTTTAAAAATCTGGG
TTTAGCTGTAGCGGTAACATAATACGATGAGGCAGGATGGGTCGCCTGTA
CTGTAGGTTGCTCTTGACCTCTCGCACCTGTTGGTGTCCTCACACGGTAG
CTCTTCCTTCTCATACCAGACGCTTCTGAGAGGGAGCGCAGGTATTCCTC
GTCCTGAGAGGAAAAATGATAACGCCTCCACAGCAATACAGGGGAAACGG
TGTTAACGTAACAATAGCCCTTACATGTGTACCACTCGCCCGTATTCACT
TCACCCAATACCGATATCCCCCACTGCCTTCAAAACCAAATCCTCCCCGA
GCCAGTTCGTCACCCTTCGGTCGGTTTCATCCCAACCTCCACCTCTCCCC
CGTCCCCTCCCCCGCCGACCCCCATTTTGCTTTTTTGTTACCCCCGCCCC
CCCCGCCCCTTTCGATTCTTGTTTTTGGGGGGGTTTTATGCTTGGAGACA
ATCTTATAGGACCGCGCAGAGTACGTGGCCACGTGCTCGTGGGACAAGCA
CGTGCGAATTTTCGACATCGGCAACCAGAGTGACGGCCAGCTCGCGTTTC
AGCAGCTCGACAACAACGGAAACAGCGTGAGGACCCCGTCCCGGATTTTT
CCCAGGGATCACAGGCTACGTTATGGCGGAACTCATGGTGGCAGCCATGG
CGGCGGAAGAGGAGCGCAGAGTCCAGGAGAGGGACACTCGGCAGACATTC
TGGCCATCGCGCACTGTGGCCCTCGGCAGGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12556:1242..8073+

>mRNA_M-pyrifera_M_contig12556.5169.1 ID=mRNA_M-pyrifera_M_contig12556.5169.1|Name=mRNA_M-pyrifera_M_contig12556.5169.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2388bp|location=Sequence derived from alignment at M-pyrifera_M_contig12556:1242..8073+ (Macrocystis pyrifera P11B4 male)
CCCGGAGGACACCCACGAGGCGGCCGACCTGAGAGGGAGCTACTCAATGC
CGGTACACGTCGACGCCGTGTCCCGAGTTTCGTACGCGACCGACCTCAGC
GCAGTGCTAACCTGTGGCGTGGACGGCAAGATCCACTTCGTCGACCTCGG
CAAGCGGGTAGTGCTCCGAACGTTCGACGGTCACGCGGACCGCGCCGTCT
TCGCCTTCGCCTACTGCAGGCGCCCGGAGGACACCCACGAGGCGGCCGAC
CTGAGAGGGAGCTACTCAATGCCGGTACACGTCGACGCCGTGTCCCGAGT
TTCGTACGCGACCGACCTCAGCGCAGTGCTAACCTGTGGCGTGGACGGCA
AGATCCACTTCGTCGACCTCGGCAAGCGGGTAGTGCTCCGAACGTTCGAC
GGTCACGCGGACCGCGCCGTCTTCGCCTTCGCCTACTGCAGGCGCCATCG
TTTCGCCGTTTCAGCTGGCATGGGTCGAGAGGTGATGTTCTGGAACCCGT
ACACCATGGACATCCTGGCGAGGGGGGAGGGGCACGTGTCGAACGTGAGG
CACTGCCTTGTCGACGACGAGAACGACCGAGTCATTACCGTCTCCGCGGA
GAAGACCGTGCGCTGCTGGGACAGCAACACCTTCTGTTGTATTCAGCCAT
CGTTTCGCCGTTTCAGCTGGCATGGGTCGAGAGGTGATGTTCTGGAACCC
GTACACCATGGACATCCTGGCGAGGGGGGAGGGGCACGTGTCGAACGTGA
GGCACTGCCTTGTCGACGACGAGAACGACCGAGTCATTACCGTCTCCGCG
GAGAAGACCGTGCGCTGCTGGGACAGCAACACCTTCTGTTGTATTCAGGT
GTTCAGGGACACCCGGACGCACCGGCCAGACGACATGGTGACAGCCGCTC
TCTGGGACGGCGGCAAGAGCTCACTGATATTGGCCGGCAGCAGGCTCGGA
GCGTGGAAAAACGTAGGGGCCATACAGTTCACCACGCGGACACACGAGGC
GCCCGTCACCGCAGCGCTGTACAACACCAACTTTCATCAGGCATGATTGT
GTTCAGGGACACCCGGACGCACCGGCCAGACGACATGGTGACAGCCGCTC
TCTGGGACGGCGGCAAGAGCTCACTGATATTGGCCGGCAGCAGGCTCGGA
GCGTGGAAAAACGTAGGGGCCATACAGTTCACCACGCGGACACACGAGGC
GCCCGTCACCGCAGCGCTGTACAACACCAACTTTCATCAGGCATGATTGT
TGTCTCTGGGGATGCCATGGGAAACGTTCACGTCTGGCTCATCGAGACCG
GCCAGCTCACGTTGTCTCTGGGGATGCCATGGGAAACGTTCACGTCTGGC
TCATCGAGACCGGCCAGCTCACATGTTGCAGGTTTGCCGGTGCGCACGGG
TCCTCCAAGATGAGCTGCATGTGCTTCGACTCGTCGGAGAGGAGACTTCT
GACTGGTGCCAGCGATGGAGCCGTCAAAATGTGGAACTTCAGCAACGGGA
AAATGTTGCAGGTTTGCCGGTGCGCACGGGTCCTCCAAGATGAGCTGCAT
GTGCTTCGACTCGTCGGAGAGGAGACTTCTGACTGGTGCCAGCGATGGAG
CCGTCAAAATGTGGAACTTCAGCAACGGGAAAGAGCTCCAGTTTTTCGGC
TCTGGGGCTAAGTCAGGGGGGCTCACGGGGAAAGGGAAGGAGGTATCGGG
AATCGCATACTGCAAGGACAACAGGGACTCGGAGCACGAGCTCCAGTTTT
TCGGCTCTGGGGCTAAGTCAGGGGGGCTCACGGGGAAAGGGAAGGAGGTA
TCGGGAATCGCATACTGCAAGGACAACAGGGACTCGGAGCACGACCGCGC
AGAGTACGTGGCCACGTGCTCGTGGGACAAGCACGTGCGAATTTTCGACA
TCGGCAACCAGAGTGACGGCCAGCTCGCGTTTCAGCAGCTCGACAACAAC
GGAAACAGCGTGAGGACCCCGTCCCGGATTTTTCCCAGGGATCACAGGCT
ACGTTATGGCGGAACTCATGGTGGCAGCCATGGCGGCGGAAGAGGAGCGC
AGAGTCCAGGAGAGGGACACTCGGCAGACATTCTGGCCATCGCGCACTGT
GGCCCTCGGCAGGTTGACCGCGCAGAGTACGTGGCCACGTGCTCGTGGGA
CAAGCACGTGCGAATTTTCGACATCGGCAACCAGAGTGACGGCCAGCTCG
CGTTTCAGCAGCTCGACAACAACGGAAACAGCGTGAGGACCCCGTCCCGG
ATTTTTCCCAGGGATCACAGGCTACGTTATGGCGGAACTCATGGTGGCAG
CCATGGCGGCGGAAGAGGAGCGCAGAGTCCAGGAGAGGGACACTCGGCAG
ACATTCTGGCCATCGCGCACTGTGGCCCTCGGCAGGTT
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