mRNA_M-pyrifera_M_contig12552.5152.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: D7G7U0_ECTSI (Ephrin_rec_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U0_ECTSI) HSP 1 Score: 360 bits (924), Expect = 4.890e-123 Identity = 200/265 (75.47%), Postives = 229/265 (86.42%), Query Frame = 1
Query: 1 MKSGLLPTGISFVFAWQVWTAVIAS--TVFVAATLEQCKLDCAGNTTQEVAAAAALNGQTWSVRDTQRLVGPTQPAAEQNATYPLAKAPFPLPFHSFCQLGCSLFFAGSPQNTTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCADGSMSKCGPGTFRNTSYDTISSCTECPKGTYREQEKGGGVEDXXXXXXXXXXXXXXXXXXXXXXXXXDGLFAELEGTAECSCMTEDSCSAEWQNYQRDSMPYVGR 789
+++ ++PT +F AWQ WT + AS ++FV+ATLEQC LDCAGNTT E+ A AALNG +WSV DTQRLVGPT+PA+E NATYP A+AP PLPFHSFCQLGCS FFAGSP+NTTCSGLCD FY RNVSV INDYAEKARLECRDGCNIAVLRCQPGYSCA G MS+C PGT+RNTSYD I++CT+CPKGTYR + KG GV+DXXXXXXXXXXXXXXXXXXXXXXXXX +A+ EGTAECSC+TEDSC EWQN+QRDSMP++GR
Sbjct: 8 LRAFVVPT--TFALAWQAWTTLTASNSSLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPRNTTCSGLCDDFYVRNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAAGVMSECSPGTYRNTSYDMINTCTQCPKGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAKEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGR 270
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A7S1TV74_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV74_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.440e-35 Identity = 72/180 (40.00%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 46 WQVWTAVIASTVFVAATLEQCKLDCAGNTTQEVAAAAALNGQTWSVRDTQRLVGPTQPAAEQNATYPLAKAPFPLPFHSFCQLGCSLFFAGSPQNTTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCADGSMSKCGPGTFRNTSYDTISSCTECPKGTYREQEKG 585
W++ + A+ + AA L+ CK DC+ D R VGPT+P + +P AP P P+ FCQ GCSLFF P T C CD Y +V+V ND AE ARLECRDGC + +LRCQ GY C GSM +C GT+R+ + + +C +CP+G YR +G
Sbjct: 2 WRLLLPLAAALLPAAADLDHCKADCS---------------------DAARPVGPTRPPNTRG--HPWFPAPNPNPYLQFCQTGCSLFFESYPVLTDCQAECDRIYRYDVTVAYNDQAEVARLECRDGCEMGLLRCQAGYYCTAGSMLQCPIGTYRDVDFAAVEACVDCPRGRYRSDPRG 158
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A7S3HQK9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQK9_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.830e-34 Identity = 101/214 (47.20%), Postives = 125/214 (58.41%), Query Frame = 1
Query: 196 RLVGPTQPAAEQNATYPLAKAPFPLPFHSFCQLGCSLFFAGSPQNTTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCADGSMSKCGPGTFRNTSYDT-------ISSCTECPKGTYREQEKGGGVEDXXXXXXXXXXXXXXXXXXXXXXXXXDGLFAELEGTAECSCMTEDSCSA---------EWQNYQRDSMPYVGR 789
RL GPT+ +Q +P A A FP FCQLGC LF+ P+NTTC LC+ FY ++V ND AE+A+LEC+DGC IA+ CQ GY C +G M C GT+R D +SCT+CP G YR KG + XXXXXXXXXXXXXXXXXXXXXXXXX G C C+T SC + +Y R+S+P++GR
Sbjct: 44 RLTGPTK--MQQTKQHPWAMAAFPTKQKGFCQLGCQLFYTEVPKNTTCKRLCNYFYRYKITVGYNDLAEEAKLECQDGCEIALQVCQAGYYCDEGIMLPCPAGTYREPVTDVSILALEKATSCTKCPYGRYRSTNKGKSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQRLCKCITPGSCGSIIDDNVVFSNGVDYYRESIPFIGR 255
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A835ZBR7_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR7_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.210e-32 Identity = 89/170 (52.35%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 283 FCQLGCSLFFAGSPQNTTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCADG-SMSKCGPGTFRNTSYDTISSCTECPKGTYREQEKGGGVEDXXXXXXXXXXXXXXXXXXXXXXXXXDGLFAELEGTAECSCMTEDSCSAEWQNYQRDSMPYVGR 789
FC+ GC+ F++ SP +C CD Y + S ++D+AEKARL+CRDGC I CQPGY C M +C PGT+RN S ++ C CP G YRE G G+ DXXXXXXXXXXXXXXXXXXXXXXXXX L+ +EG A C+ +T DS + E+QN +S P++GR
Sbjct: 35 FCEAGCAYFYSSSPTLQSCDVNCDEMYRQRTSFNVSDWAEKARLDCRDGCRIGFRVCQPGYKCEHAHGMVECEPGTYRNASDADVTQCIACPAGHYREAPGGAGLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXLYTLVEGQAACANITYDSGNPEFQNLLNESEPFLGR 204
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A7S1FSZ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSZ0_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.350e-27 Identity = 92/205 (44.88%), Postives = 120/205 (58.54%), Query Frame = 1
Query: 262 FPLPFHSFCQLGCSLFFA---GSPQNTTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCAD---------------------GSMSKCGPGTFRNTSYDTISSCTECPKGTYREQEKGGGVEDXXXXXXXXXXXXXXXXXXXXXXXXXDGLFAELEGTAECSCMTEDSCSAEW-----QNYQRDSMPYVGR 789
+P + CQLGC+LFF+ Q ++C LCD YA N++V ND E RLECRDGC++A++RCQPGY C GSM +C PG++R+ SY + +C CP G +RE+ +G +E XXXXXXXXXXXXXXXXXXXXXXXXX F G C C+T +C E +R+++PYVGR
Sbjct: 224 YPDQYFRACQLGCTLFFSLRENPKQLSSCLSLCDDKYAYNITVSYNDLMELVRLECRDGCHMALMRCQPGYFCLQPSTTLDDDGKHHLSSTSLPNGGSMHECLPGSYRDVSYHAVDTCVPCPPGRFREETRGLSMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFTTEPGRHVCKCITPQACDKEQLPDPADAEKRNTVPYVGR 428
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A7S1ZTF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTF7_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.170e-26 Identity = 89/205 (43.41%), Postives = 117/205 (57.07%), Query Frame = 1
Query: 274 FHSFCQLGCSLFFAG--SPQNTT-CSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCAD-------------------------GSMSKCGPGTFRNTSYDTISSCTECPKGTYREQEKGGGVEDXXXXXXXXXXXXXXXXXXXXXXXXXDGLFAELEGTAECSCMTEDSCSAEW-----QNYQRDSMPYVGR 789
++ FC++GC+LFF+ P + + C+ CD Y N++V ND E +RLECRDGC +A+ RCQPGY C+ G MS C G +R+ SYD I C +CP G +RE KG ++ XXXXXXXXXXXXXXXXXXXXXXXXX A C C+T DSC E + +R+++PY+GR
Sbjct: 96 YYKFCEVGCTLFFSSISDPMHLSECTHKCDQIYQYNITVGYNDLMEVSRLECRDGCQMALKRCQPGYFCSQVSLLNDDENSTLGPKSHGRDTRYTGGYMSHCPAGKYRDFSYDAIEMCVDCPPGRFREDTKGKSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFCKCITSDSCKKEQLPSPANSEKRETIPYIGR 300
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A7S2CHA6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHA6_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.820e-24 Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 1
Query: 196 RLVGPTQPA--------------AEQNATYPLAKAPFPLPFHSFCQLGCSLFFAGS-----PQN-------------TTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCADGSMSKCGPGTFRNTSYDTISSCTECPKGTYREQEKG 585
RLVGPT+P+ + +P A++P P P+ FCQ+GC+ ++ PQ + C C+ + +++ +D AE ARLEC DGC IA LRCQPGYSC +G M+ C PGT+R+ Y + C +CP G YR+ G
Sbjct: 142 RLVGPTRPSDSDVYLFGLHETIHLDLTRPHPWARSPEPNPYMKFCQIGCTYYYNQEQWGIYPQREVPSDVVENWNTLSACLARCNHTFRYDITTGYSDIAEMARLECWDGCQIANLRCQPGYSCFNGDMNPCKPGTYRHNEYTRVEQCYDCPNGRYRDAVGG 303
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A7S0XEG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEG6_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.030e-22 Identity = 85/186 (45.70%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 196 RLVGPTQPAAEQNATYPLAKAPFPLPFHSFCQLGCSLFFAGSPQNTTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSCADGSMSKCGPGTFRNTSYDT-------ISSCTECPKGTYREQEKGGGVEDXXXXXXXXXXXXXXXXXXXXXXXXXDGLFAELEGTAECSCMTED 732
RL GP +P T+P A FP +FC+LGC FF+ N TC C Y + +D AE A+LEC DGCNIA+ CQ GY C +G+M+ C G +R + D + +C CP G YR +KG DXXXXXXXXXXXXXXXXXXXXXXXXX EG+ C C+T +
Sbjct: 44 RLFGPIKPP--DTRTHPWKVAQFPSTTTAFCKLGCQYFFSYYSNNNTCINQCKYQYRYQATTGYSDSAELAKLECLDGCNIALSICQAGYYCVNGNMTVCPAGKYRESVSDLSLITLEKVHTCINCPYGRYRALDKGRSANDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGSRYCKCITTE 227
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: K0QZJ0_THAOC (Ephrin_rec_like domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZJ0_THAOC) HSP 1 Score: 99.8 bits (247), Expect = 2.510e-20 Identity = 101/263 (38.40%), Postives = 133/263 (50.57%), Query Frame = 1
Query: 61 AVIASTVFVAATLEQCKLDCAGNTTQEVAAAAALNGQTWSVRDTQRLVGPTQPAAEQNATYPLAKAPFPLPFHS-----------FCQLGCSLFF----AGSPQNTTCSGL------CDS-FYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSC------------ADGSMSKCGPGTFRNTSYDTISSCTECPKGTYREQEKGGGVEDXXXXXXXXXXXXXXXXXXXXXXXXXDGLFAELEGTAECSCMTEDSCSAE 747
A +AS V V AT EQC++DC N + PT+P EQ+ + P P+H+ FC+LGC+ FF + P++ + S L C+ F + + ND ARLECRDGC +A+ RCQPGY C A G M+ C PGT+R+ Y + +C CP +RE KG XXXXXXXXXXXXXXXXXXXXXXXXX FA + + C+C+T D+C+ E
Sbjct: 146 AAVASAVVVLATEEQCRIDC--------------NSDDRT---------PTRPWHEQDPLRNALRLTRPYPYHAAADDDERDYPAFCRLGCNYFFVPESSDDPEDESKSTLDQCLERCEEEFEYTSTTPPYNDLVAIARLECRDGCLLALRRCQPGYYCSQVSFRDGNGTYAGGQMTPCPPGTYRDVDYGAVEACVPCPPNHFREDVKGRSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAS-QPASYCTCITPDACARE 384
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Match: A0A7S2SQ56_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ56_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 6.760e-19 Identity = 57/168 (33.93%), Postives = 82/168 (48.81%), Query Frame = 1
Query: 196 RLVGPTQPAAEQNATY--PLAKAPFPLPFHSFCQLGCSLFFAGS--PQNTTCSGLCDSFYARNVSVVINDYAEKARLECRDGCNIAVLRCQPGYSC------------------ADGSMSKCGPGTFRNTSYD----------------TISSCTECPKGTYREQEKG 585
R +GPT+P+ ++ Y + K +P + FC+ GC+ F++ P N TC C S YA SV ND A ARLEC DGC++A++RC+PGYSC +M+ C GT+R Y+ ++ SC +CP G YR+ KG
Sbjct: 87 RPIGPTRPSEPRDHPYFHAVGKDAWPNTYAKFCEAGCTFFYSEPEYPSNITCKQRCSSTYAYEGSVGENDMAMVARLECYDGCDLALMRCRPGYSCDWPSTTGLGAVDAAAGWTRTANMTACPLGTWRGVLYNETSGSQTDEDLYSPGISVDSCRDCPSGRYRDFPKG 254 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12552.5152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12552.5152.1 >prot_M-pyrifera_M_contig12552.5152.1 ID=prot_M-pyrifera_M_contig12552.5152.1|Name=mRNA_M-pyrifera_M_contig12552.5152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp MKSGLLPTGISFVFAWQVWTAVIASTVFVAATLEQCKLDCAGNTTQEVAAback to top mRNA from alignment at M-pyrifera_M_contig12552:1439..3207+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12552.5152.1 ID=mRNA_M-pyrifera_M_contig12552.5152.1|Name=mRNA_M-pyrifera_M_contig12552.5152.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1769bp|location=Sequence derived from alignment at M-pyrifera_M_contig12552:1439..3207+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12552:1439..3207+ >mRNA_M-pyrifera_M_contig12552.5152.1 ID=mRNA_M-pyrifera_M_contig12552.5152.1|Name=mRNA_M-pyrifera_M_contig12552.5152.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig12552:1439..3207+ (Macrocystis pyrifera P11B4 male)back to top |