mRNA_M-pyrifera_M_contig125435.5132.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A6I3WRD5_9ACTN (Methionyl-tRNA formyltransferase n=2 Tax=root TaxID=1 RepID=A0A6I3WRD5_9ACTN) HSP 1 Score: 221 bits (563), Expect = 2.150e-69 Identity = 111/167 (66.47%), Postives = 129/167 (77.25%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKI 501
S VDDAL VGADLGVVVAFG+LI+PHVLA LPMVNLHFSLLPRWRGAAPVERALL GDA TGVC+MQ+AEGLDTG + V VPI T D LR LVDVG L+EAL+ GLG + Q GEP +AAK++ E+ +D +PA +IDRL+RLG A+A FR KR K+
Sbjct: 72 SHSVDDALNVGADLGVVVAFGQLIRPHVLASLPMVNLHFSLLPRWRGAAPVERALLSGDAVTGVCLMQLAEGLDTGPVIDVVEVPIGPRDTADDLRQRLVDVGARQLVEALQRGLGEPQAQVGEPTHAAKLQPIEFAIDWRRPATEIDRLVRLGVAYARFRGKRLKV 238
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A848UKR1_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UKR1_9ACTN) HSP 1 Score: 219 bits (558), Expect = 4.220e-69 Identity = 111/170 (65.29%), Postives = 125/170 (73.53%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKIWSA 510
S DVDD L A+LGVVVAFG +I+PHVLAELPMVNLHFSLLPRWRGAAPVERALL GD TGV VM+V EGLDTG +Y V VPI T D LR LV+ G+ L+E L+ GLG PQ G P YAAKIE E R+D T+PA +IDRLIR+GGAW FR R KI +A
Sbjct: 60 SHDVDDVLDADAELGVVVAFGEIIRPHVLAELPMVNLHFSLLPRWRGAAPVERALLAGDDVTGVAVMEVEEGLDTGGVYAEVEVPIGPTTTADELRAALVETGSRLLVETLDAGLGEPRPQVGTPTYAAKIEPAELRIDWTQPADEIDRLIRVGGAWTTFRGARLKIHTA 229
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: UPI00189B8056 (methionyl-tRNA formyltransferase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=UPI00189B8056) HSP 1 Score: 220 bits (560), Expect = 5.110e-69 Identity = 106/167 (63.47%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKI 501
+TDVD AL V A+LGVVVAFGR+IKPHVL LPMVNLHFSLLP WRGAAPVERA+L GD TGVC+M V EGLDTG +YR V I D TLD LRG LVD+G + L+ AL GLGP PQ GEP YA KI +E +D T+P D+ ++RLGGAW FR +R K+
Sbjct: 69 TTDVDAALEVDAELGVVVAFGRIIKPHVLERLPMVNLHFSLLPEWRGAAPVERAILAGDERTGVCLMAVEEGLDTGGVYRREVVDIDPDETLDELRGRLVDIGADVLVAALGEGLGPPVPQEGEPTYAEKIRPEELEIDWTRPVRDVHAVVRLGGAWTTFRGRRLKV 235
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A7K1B9Y0_9ACTN (Methionyl-tRNA formyltransferase n=2 Tax=root TaxID=1 RepID=A0A7K1B9Y0_9ACTN) HSP 1 Score: 219 bits (559), Expect = 8.170e-69 Identity = 108/170 (63.53%), Postives = 128/170 (75.29%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKIWSA 510
S DVDD L ADLGVVVAFGRLI+PH+LA LP VNLHFSLLPRWRGAAPVERALL GD TGVC+M++ GLDTG ++ V VPI ADAT DSLR LVDVGT+ L++ L HG+GPG Q GE YAAK+ D+ LD ++PA + R +RLGGAW +R KR K+ +A
Sbjct: 78 SHDVDDVLAADADLGVVVAFGRLIRPHLLAGLPFVNLHFSLLPRWRGAAPVERALLAGDDRTGVCLMRLEAGLDTGPVHARVEVPITADATGDSLRRLLVDVGTDLLVDQLRHGIGPGTVQDGEVTYAAKLTTDDLHLDWSRPAVERHRQVRLGGAWTTWRGKRLKVHAA 247
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A6J7AE99_9ZZZZ (Methionyl-tRNA formyltransferase n=3 Tax=root TaxID=1 RepID=A0A6J7AE99_9ZZZZ) HSP 1 Score: 218 bits (554), Expect = 1.810e-68 Identity = 109/170 (64.12%), Postives = 126/170 (74.12%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKIWSA 510
S VDD LG +LGVVVAFG++IKPHVLAE+PMVN+HFSLLPRWRGAAPVERALL GD ETG C+MQ+ EGLDTG +Y TV PI T D LR LV GTE L+ L L PQ+GEP+YAAKI DE R+D ++PAA IDRL+RLGGAW FR KR K+ +A
Sbjct: 62 SHSVDDVLGKDIELGVVVAFGQIIKPHVLAEVPMVNIHFSLLPRWRGAAPVERALLAGDTETGTCLMQLEEGLDTGPVYDTVRTPIGPTDTADDLRRVLVAAGTEQLVRCLAAPLPTPVPQSGEPLYAAKITPDELRIDWSQPAAQIDRLVRLGGAWTMFRGKRVKVHAA 231
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A4R7HZZ0_9ACTN (Methionyl-tRNA formyltransferase n=2 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7HZZ0_9ACTN) HSP 1 Score: 216 bits (551), Expect = 5.010e-68 Identity = 114/171 (66.67%), Postives = 125/171 (73.10%), Query Frame = 1
Query: 10 VDDALGVGA----DLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKIWSA 510
VDD L V A DLGVVVA+GRLIKPHVL+EL VNLHFSLLPRWRGAAPVERALLEGD TGVC+MQ+ EGLDTG +Y V VPI AD T D LR LVDVGT L++ L GLG EPQTGE YAAKI+ E R+D + P RLIRLGGAW FR RFKI +A
Sbjct: 60 VDDLLAVHAEHPVDLGVVVAYGRLIKPHVLSELDFVNLHFSLLPRWRGAAPVERALLEGDDVTGVCLMQLEEGLDTGGVYDCVEVPIGADTTADELRHELVDVGTRLLVDRLASGLGEPEPQTGETTYAAKIDPAELRIDWSAPVEQTHRLIRLGGAWTTFRGARFKIHAA 230
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A7V9V8M2_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9V8M2_9ACTN) HSP 1 Score: 217 bits (553), Expect = 5.350e-68 Identity = 104/168 (61.90%), Postives = 125/168 (74.40%), Query Frame = 1
Query: 7 DVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKIWSA 510
DVDD L G DLGVVVAFGRLIKPHVL ++PMVN+HFSLLPRWRGAAPVERA+L GD ETGVC+M V GLDTG +YR V I A+ T D LRG L +GT L+E L+ GLGP PQ G+ YAAK+E E RLD ++PAA++ R++RLG AW FR +R ++ A
Sbjct: 69 DVDDVLDAGVDLGVVVAFGRLIKPHVLEQVPMVNVHFSLLPRWRGAAPVERAILAGDTETGVCLMAVEAGLDTGPVYRCERVDIGAEETADELRGRLATIGTSLLVEELDKGLGPSTPQEGDATYAAKLEPHELRLDWSRPAAELQRVVRLGRAWTIFRGRRLRVLRA 236
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A5Q2RJV0_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RJV0_9ACTN) HSP 1 Score: 220 bits (560), Expect = 7.180e-68 Identity = 106/167 (63.47%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKI 501
+TDVD AL V A+LGVVVAFGR+IKPHVL LPMVNLHFSLLP WRGAAPVERA+L GD TGVC+M V EGLDTG +YR V I D TLD LRG LVD+G + L+ AL GLGP PQ GEP YA KI +E +D T+P D+ ++RLGGAW FR +R K+
Sbjct: 161 TTDVDAALEVDAELGVVVAFGRIIKPHVLERLPMVNLHFSLLPEWRGAAPVERAILAGDERTGVCLMAVEEGLDTGGVYRREVVDIDPDETLDELRGRLVDIGADVLVAALGEGLGPPVPQEGEPTYAEKIRPEELEIDWTRPVRDVHAVVRLGGAWTTFRGRRLKV 327
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A7X9KM78_9ACTN (Methionyl-tRNA formyltransferase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KM78_9ACTN) HSP 1 Score: 215 bits (548), Expect = 1.820e-67 Identity = 111/170 (65.29%), Postives = 125/170 (73.53%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKIWSA 510
S DVDD LG G +LGVVVAFG+LIKPHVLAE+PMVN HFSLLPRWRGAAPVERA+L GDAETGVC+MQ+ EGLDTG +Y TV VPI A T D LR LV G E L+ L L PQ GEP+YAAKI D+ R+ + A IDR+IRLGGAW FR KR K+ SA
Sbjct: 60 SHDVDDVLGKGIELGVVVAFGQLIKPHVLAEVPMVNSHFSLLPRWRGAAPVERAVLAGDAETGVCLMQLEEGLDTGGVYDTVRVPIGAAMTADELRRELVAAGCEQLVRCLAGPLPTPTPQVGEPLYAAKITPDDLRIRWAQGAQQIDRVIRLGGAWTTFREKRVKVLSA 229
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Match: A0A2E0RMX1_9ACTN (Methionyl-tRNA formyltransferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RMX1_9ACTN) HSP 1 Score: 214 bits (544), Expect = 5.590e-67 Identity = 111/170 (65.29%), Postives = 122/170 (71.76%), Query Frame = 1
Query: 1 STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPVERALLEGDAETGVCVMQVAEGLDTGDIYRTVTVPIPADATLDSLRGYLVDVGTETLLEALEHGLGPGEPQTGEPVYAAKIERDEYRLDMTKPAADIDRLIRLGGAWAEFRSKRFKIWSA 510
S VDD L A+LGVVVAFGRLIKPHVLAEL VNLHFSLLPRWRGAAPVERALL GD TGVC+MQ+ EGLDTG +Y VPI D T D LR LV+VGT L++ L GLG EPQ GE YAAKI+ E R+D + PA I RLIRLGGAW FR R KI +A
Sbjct: 60 SHTVDDVLQAEAELGVVVAFGRLIKPHVLAELDFVNLHFSLLPRWRGAAPVERALLAGDEVTGVCLMQLEEGLDTGGVYDRAEVPIGPDTTADDLRRELVEVGTRLLVDRLAAGLGDAEPQVGEATYAAKIDPAELRIDWSAPAEQIHRLIRLGGAWTTFRGARVKIHAA 229 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125435.5132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125435.5132.1 >prot_M-pyrifera_M_contig125435.5132.1 ID=prot_M-pyrifera_M_contig125435.5132.1|Name=mRNA_M-pyrifera_M_contig125435.5132.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp STDVDDALGVGADLGVVVAFGRLIKPHVLAELPMVNLHFSLLPRWRGAAPback to top mRNA from alignment at M-pyrifera_M_contig125435:3..512- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125435.5132.1 ID=mRNA_M-pyrifera_M_contig125435.5132.1|Name=mRNA_M-pyrifera_M_contig125435.5132.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig125435:3..512- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125435:3..512- >mRNA_M-pyrifera_M_contig125435.5132.1 ID=mRNA_M-pyrifera_M_contig125435.5132.1|Name=mRNA_M-pyrifera_M_contig125435.5132.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig125435:3..512- (Macrocystis pyrifera P11B4 male)back to top |