mRNA_M-pyrifera_M_contig125331.5126.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A2D8FBB2_9EURY (Uncharacterized protein n=7 Tax=cellular organisms TaxID=131567 RepID=A0A2D8FBB2_9EURY) HSP 1 Score: 167 bits (422), Expect = 3.810e-49 Identity = 86/124 (69.35%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAFARMGR 372
LREWRGD HVA L AAP D +EALILHAAT VP+ AL ATR+WPD+ W A VARLVARGLV DE FT G +R +IERRTN A+L LVEAVG T RLI+LLKP+RR LLDGGAFA GR
Sbjct: 156 LREWRGDAHVAALVAAPADPIEALILHAATGIVPKVALTATRQWPDEQWDAGVARLVARGLVQEDESFTEMGEAFRADIERRTNQAALPLVEAVGPDRTARLIDLLKPVRRALLDGGAFAAFGR 279
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A2E8LDT7_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LDT7_9ACTN) HSP 1 Score: 163 bits (413), Expect = 4.070e-49 Identity = 85/124 (68.55%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAFARMGR 372
LREWRGD HVA L AAP D +EALILHAAT VP+ AL ATR+W D+ W A VARLVARGLV DE FT G +R +IERRTN A+L LVEAVG T RLI+LLKP+RR LLDGGAFA GR
Sbjct: 51 LREWRGDAHVAALVAAPADPIEALILHAATGIVPKVALTATRQWSDEQWDAGVARLVARGLVQEDESFTEMGEAFRADIERRTNRAALPLVEAVGPDRTARLIDLLKPVRRALLDGGAFAAFGR 174
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A7Y2DCN9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DCN9_9ACTN) HSP 1 Score: 131 bits (330), Expect = 3.420e-35 Identity = 72/119 (60.50%), Postives = 80/119 (67.23%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAF 357
+REWRGDVHVA L + PL +EALILHAAT QVP AL ATR W DD W A VA L RGLV+AD FT +G R IE RTN A +ALV+AVG G RL LLKP + GLL G F
Sbjct: 164 IREWRGDVHVAALVSEPLHPIEALILHAATGQVPVAALRATRGWSDDDWDAKVAGLADRGLVNADASFTPAGEATRAAIEDRTNAACVALVDAVGADGADRLFNLLKPWQAGLLASGIF 282
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A846YYC6_9ACTN (Uncharacterized protein n=1 Tax=Actinomadura latina TaxID=163603 RepID=A0A846YYC6_9ACTN) HSP 1 Score: 109 bits (273), Expect = 6.880e-27 Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAF 357
LRE+RGD H+AVLTA + +EAL+LHAAT +P+ L ATR WP + W A RL ARGL+D D TA G +R IE RT+ +L A+GE RL EL +P R ++D G F
Sbjct: 153 LREFRGDGHIAVLTAEGVTPIEALVLHAATGTMPKTFLTATRAWPAEQWDATAERLRARGLLDGDS-LTAEGEAFRQSIEDRTDALALPAYAALGEDDCERLAELARPFGRAVMDNGLF 270
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A7V9B5K0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9B5K0_9ACTN) HSP 1 Score: 108 bits (270), Expect = 2.080e-26 Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAF 357
LRE RGD H+A L A + G EAL+LHAA+ +VPR AL +R W D+ W+AAV L +RGLVD D FT +GR RD IE RT+ ++A +GE G L L++P+ + ++ G F
Sbjct: 156 LREHRGDGHIACLVEAGIGGCEALVLHAASGEVPRAALQGSRGWSDEDWSAAVEGLASRGLVDVDGTFTDAGRARRDVIEARTDALAVAPWATIGEDGCDELRRLVRPLSKAIVASGTF 274
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A4R4P2E7_9ACTN (Uncharacterized protein n=2 Tax=Actinomadura bangladeshensis TaxID=453573 RepID=A0A4R4P2E7_9ACTN) HSP 1 Score: 107 bits (268), Expect = 3.790e-26 Identity = 59/119 (49.58%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAF 357
LRE+RGD H+AVLTA + VEAL+LHAAT +P+ L ATR WP + W A RL ARGL+D E T G +R IE RT+ +L A+GE G RL EL +P R + D G F
Sbjct: 153 LREFRGDGHIAVLTAEGVTPVEALVLHAATGTMPKAFLTATRAWPAEQWDATAKRLRARGLLDG-ESLTPEGEAFRQRIEDRTDELALPAYAALGEDGCERLAELARPFGRAVADAGLF 270
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A4R4S077_9ACTN (Uncharacterized protein n=1 Tax=Actinomadura sp. KC345 TaxID=2530371 RepID=A0A4R4S077_9ACTN) HSP 1 Score: 105 bits (261), Expect = 4.120e-25 Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGG 351
LRE+RGD H+AVLTA + +EAL+LH AT VP L ATR WP D W A RL RGL+D E T G+++R IE RT+ +L +GE G RL EL +P R ++D G
Sbjct: 153 LREFRGDGHIAVLTAEGVTPLEALVLHGATGTVPTPFLKATRAWPSDEWEATAERLRGRGLLDG-ESLTTEGKDFRRHIEDRTDALALPAYSVLGEEGCERLAELARPYGRAVVDAG 268
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: UPI0004C4C379 (hypothetical protein n=1 Tax=Streptomyces rimosus TaxID=1927 RepID=UPI0004C4C379) HSP 1 Score: 104 bits (260), Expect = 8.280e-25 Identity = 56/122 (45.90%), Postives = 71/122 (58.20%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAFARM 366
LREWRGD H++VL L + L++HAAT + P L TRRW D+ WAAA ARLVARG +DAD T +G R+ IE T+ AL VG+AG RL L+ PI G +A +
Sbjct: 170 LREWRGDAHLSVLAGHRLGPCDCLVMHAATGRAPVGILRTTRRWNDEEWAAATARLVARGWLDADGTATDAGAAARERIEAETDEHCAALWAPVGDAGARRLASLITPIGEAFTAAGTYAAL 291
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A7Y6I6K0_9ACTN (Uncharacterized protein n=2 Tax=Nonomuraea TaxID=83681 RepID=A0A7Y6I6K0_9ACTN) HSP 1 Score: 103 bits (256), Expect = 2.630e-24 Identity = 54/123 (43.90%), Postives = 73/123 (59.35%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAFARMG 369
LRE+RGD H+A L + G+EAL+LH A+ +VP L +R WP++ WAAAV RL RGL+ D+ +A G R IE RT+ +L A+GE G RL EL +P R ++D G G
Sbjct: 153 LREFRGDGHIAALLTEGVGGLEALVLHGASGEVPSAVLRISRAWPEEEWAAAVDRLRRRGLLGEDDTLSAEGTALRRHIEDRTDALALPAYGALGEEGCERLAELARPFGRAVVDAGLLDLSG 275
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Match: A0A5S4F2B9_9ACTN (Uncharacterized protein n=1 Tax=Nonomuraea turkmeniaca TaxID=103838 RepID=A0A5S4F2B9_9ACTN) HSP 1 Score: 102 bits (255), Expect = 3.420e-24 Identity = 58/123 (47.15%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 1 LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAAAVARLVARGLVDADERFTASGREYRDEIERRTNVASLALVEAVGEAGTHRLIELLKPIRRGLLDGGAFARMG 369
LRE+RGD HVA L A L G+EAL+LHAA+ +VP L +R WP++AW AA A L RGL+DA +A G+ R IE RT+ ++A A+G+ G RL EL +P R ++D G R+G
Sbjct: 157 LREFRGDGHVATLLAEGLGGLEALVLHAASGEVPTAFLKISRAWPEEAWTAAEAALQDRGLLDAGA-LSAEGQALRRHIEERTDTLAMAAYGALGDDGCERLAELARPFGRRVVDAGLL-RLG 277 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125331.5126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125331.5126.1 >prot_M-pyrifera_M_contig125331.5126.1 ID=prot_M-pyrifera_M_contig125331.5126.1|Name=mRNA_M-pyrifera_M_contig125331.5126.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp LREWRGDVHVAVLTAAPLDGVEALILHAATDQVPREALVATRRWPDDAWAback to top mRNA from alignment at M-pyrifera_M_contig125331:3..377+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125331.5126.1 ID=mRNA_M-pyrifera_M_contig125331.5126.1|Name=mRNA_M-pyrifera_M_contig125331.5126.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig125331:3..377+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125331:3..377+ >mRNA_M-pyrifera_M_contig125331.5126.1 ID=mRNA_M-pyrifera_M_contig125331.5126.1|Name=mRNA_M-pyrifera_M_contig125331.5126.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig125331:3..377+ (Macrocystis pyrifera P11B4 male)back to top |