mRNA_M-pyrifera_M_contig125275.5114.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A2E0RWB2_9ACTN (IS21 family transposase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RWB2_9ACTN) HSP 1 Score: 323 bits (829), Expect = 4.600e-107 Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARHQRSTPGN 513
AGVPVRHPEMVAIGGHYG+TVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDY SWGELVDAC+AW+ EVNGR HRVTRR PVEMLAEEQQRLHRLP+ YTAVFGETRKVSWSATISFGGVLYSVPHTLADE+VWVRVDGDQIVVTHC SGPVEVARH+RSTPG+
Sbjct: 200 AGVPVRHPEMVAIGGHYGVTVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYRSWGELVDACEAWITEVNGREHRVTRRAPVEMLAEEQQRLHRLPEVAYTAVFGETRKVSWSATISFGGVLYSVPHTLADESVWVRVDGDQIVVTHCAASGPVEVARHRRSTPGH 370
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A6B1E8X6_9ACTN (IS21 family transposase n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A6B1E8X6_9ACTN) HSP 1 Score: 309 bits (791), Expect = 2.300e-101 Identity = 148/170 (87.06%), Postives = 156/170 (91.76%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARHQRSTPG 510
AGVPVRHPEMVA GGHYGITVATCVPADPESKGGSE+TV++AKADLVPTDANL DYTSW ELV+ACDAWMAEVNGR HRVTRR P EMLAEEQQRLH LP+ PYTAVFGETRKVSWS+TISFGGV YSVPHTLADETVWVRVDGD IVV C ++GPVEVARHQRSTPG
Sbjct: 200 AGVPVRHPEMVAAGGHYGITVATCVPADPESKGGSEATVRVAKADLVPTDANLRSDYTSWAELVEACDAWMAEVNGRQHRVTRRAPTEMLAEEQQRLHALPETPYTAVFGETRKVSWSSTISFGGVTYSVPHTLADETVWVRVDGDHIVVVRCASAGPVEVARHQRSTPG 369
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A7K2BN18_9ACTN (Transposase family protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2BN18_9ACTN) HSP 1 Score: 299 bits (766), Expect = 7.950e-100 Identity = 141/171 (82.46%), Postives = 155/171 (90.64%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARHQRSTPGN 513
AGVPVRHPEMVA+G HYGITVATCVPADPESKGGSE+TV++AKADLVPTDANL Y SW ELV+AC+AWMAE+NGR HRVTRR P EML EEQQRLHRLP+ PYTAVFGETRKVSWS+TISFGGV YSVPHTLAD TVWVR+DG+++VVTHC SGPVEVAR QRSTPG+
Sbjct: 114 AGVPVRHPEMVAVGSHYGITVATCVPADPESKGGSEATVRVAKADLVPTDANLRGGYGSWAELVEACEAWMAEINGREHRVTRRAPAEMLVEEQQRLHRLPEVPYTAVFGETRKVSWSSTISFGGVTYSVPHTLADATVWVRIDGEEVVVTHCAPSGPVEVARRQRSTPGH 284
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A7K2AW78_9ACTN (IS21 family transposase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2AW78_9ACTN) HSP 1 Score: 305 bits (782), Expect = 9.260e-100 Identity = 145/170 (85.29%), Postives = 155/170 (91.18%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARHQRSTPG 510
AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSE+TV++AKADLVPTDANL Y SW +LVDAC WMAEVNGR HRVTRR PVEML EEQQRLHRLP+ PYTAVFGETRKVSWS+TISFGGV YSVPHTLADETVWVR+DG+++VV HC SGPVEVARHQRSTPG
Sbjct: 220 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSEATVRVAKADLVPTDANLRGGYASWADLVDACVVWMAEVNGREHRVTRRAPVEMLVEEQQRLHRLPETPYTAVFGETRKVSWSSTISFGGVTYSVPHTLADETVWVRIDGEEVVVVHCAPSGPVEVARHQRSTPG 389
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A6L8GZD2_9ACTN (IS21 family transposase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L8GZD2_9ACTN) HSP 1 Score: 294 bits (753), Expect = 1.230e-95 Identity = 140/171 (81.87%), Postives = 154/171 (90.06%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARHQRSTPGN 513
AGVPVRHPEMVA+G HYGITVATCVPADPESKGGSE+TV++AKADLVPTDANL Y SW ELV+AC+A MAE+NGR HRVTRR P EML EEQQRLHRLP+ PYTAVFGETRKVSWS+TISFGGV YSVPHTLAD TVWVR+DG+++VVTHC SGPVEVAR QRSTPG+
Sbjct: 200 AGVPVRHPEMVAVGSHYGITVATCVPADPESKGGSEATVRVAKADLVPTDANLRGGYGSWAELVEACEAGMAEINGREHRVTRRAPAEMLVEEQQRLHRLPEVPYTAVFGETRKVSWSSTISFGGVTYSVPHTLADATVWVRIDGEEVVVTHCAPSGPVEVARRQRSTPGH 370
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A7W0A3P1_9CHLR (IS21 family transposase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A3P1_9CHLR) HSP 1 Score: 289 bits (739), Expect = 1.500e-93 Identity = 137/170 (80.59%), Postives = 150/170 (88.24%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARHQRSTPG 510
AG+ VRHPEMVAIGGHYGIT+ATCVP DPESKGG E+TV++AKADLVPT ANL +DY SW ELVDAC+A+M EVN R HR TRR P MLAEEQ RLHRLP+RPYTAVFGETR+V+WSATISFGGV YSVPHTL DETVWVRVDGD+IV HCP+SGPVEVARH RSTPG
Sbjct: 200 AGIAVRHPEMVAIGGHYGITIATCVPRDPESKGGVEATVRIAKADLVPTSANLREDYGSWTELVDACEAFMVEVNDRDHRATRRAPSSMLAEEQLRLHRLPERPYTAVFGETRRVTWSATISFGGVTYSVPHTLCDETVWVRVDGDKIVAVHCPSSGPVEVARHARSTPG 369
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A6L6BH79_9ACTN (IS21 family transposase n=2 Tax=root TaxID=1 RepID=A0A6L6BH79_9ACTN) HSP 1 Score: 271 bits (692), Expect = 1.970e-86 Identity = 129/171 (75.44%), Postives = 145/171 (84.80%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARHQRSTPGN 513
AG+ VRHP +VA+G HYG+TVATCVPADPE+KGG E TV++AKADLVPTD NL DDY SWGELV+AC A+M +VNGR HRVTRR P EMLAEEQ RLHRLPD +TA FG+TRKVSW++TISFGGV YSVPHTLAD+ VWVRVDGD+IV TH SG VEVARH STPGN
Sbjct: 201 AGIAVRHPLIVAVGHHYGVTVATCVPADPETKGGVERTVQIAKADLVPTDTNLRDDYVSWGELVEACAAFMVKVNGREHRVTRRAPAEMLAEEQTRLHRLPDAAFTAAFGQTRKVSWTSTISFGGVTYSVPHTLADQVVWVRVDGDEIVATHIAASGAVEVARHLLSTPGN 371
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: A0A838S558_9PSEU (IS21 family transposase n=1 Tax=Pseudonocardiales bacterium TaxID=2201155 RepID=A0A838S558_9PSEU) HSP 1 Score: 236 bits (603), Expect = 4.450e-73 Identity = 115/171 (67.25%), Postives = 134/171 (78.36%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPT-SGPVEVARHQRSTPG 510
AGVPVRHP +V HYG T+ATCVPADPESKGGSE+ V++AKADLVPTDANLLDDY SW ELV+AC+ + ++N R HRVTRR P +MLA+E+ RLHRLPD +TA FG+TR VS ++T S GGV YSVPHTL D VWVRV GD +V TH SG VEVARH+ STPG
Sbjct: 201 AGVPVRHPLIVTAANHYGTTIATCVPADPESKGGSEAAVRVAKADLVPTDANLLDDYRSWAELVEACETFTNDINAREHRVTRRAPFDMLADERTRLHRLPDVAFTAAFGQTRSVSRTSTFSLGGVRYSVPHTLIDSQVWVRVAGDHVVATHVAADSGAVEVARHELSTPG 371
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: F4CK87_PSEUX (Integrase catalytic region n=4 Tax=Pseudonocardiaceae TaxID=2070 RepID=F4CK87_PSEUX) HSP 1 Score: 233 bits (593), Expect = 2.900e-71 Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVT--------HCPTSGPVEVARHQRSTPG 510
AG+ VRHPE+VA+G HYG+T+ TCVPADP+SKGGSE+TV+++KADLVPT ANLL++Y ++ +L AC ++ +VN RPHR TRRPPVE LAEE+ RLH LPDRP+T FG TR+V+W AT+S GV YSVPH L D VWVR GD +V+T H P SGP EVARH RSTPG
Sbjct: 199 AGIAVRHPEIVAVGRHYGMTIRTCVPADPQSKGGSEATVRISKADLVPTAANLLEEYRTFAQLETACRSFCEQVNARPHRETRRPPVEALAEERTRLHPLPDRPFTVAFGTTRRVNWDATVSVDGVRYSVPHQLVDTRVWVRFHGDDLVITAVDAPLEGHGPGSGPTEVARHARSTPG 376
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Match: R4Z2B8_9ACTN (Integrase catalytic region n=5 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=R4Z2B8_9ACTN) HSP 1 Score: 226 bits (576), Expect = 2.270e-70 Identity = 105/164 (64.02%), Postives = 129/164 (78.66%), Query Frame = 1
Query: 1 AGVPVRHPEMVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSWGELVDACDAWMAEVNGRPHRVTRRPPVEMLAEEQQRLHRLPDRPYTAVFGETRKVSWSATISFGGVLYSVPHTLADETVWVRVDGDQIVVTHCPTSGPVEVARH 492
A +PVR+P++V+ +YG+T+ATCVP DPESKGGSE+TVK+AKADLVP+DANL D+Y SW L AC+A+M +VN R H VTRR PV+MLAEEQ RLHR+PD PYT FGE+R VSWS+TI F G YSVPH+L D VWVR+ GD++V+ H GP EVARH
Sbjct: 64 AALPVRNPKIVSAAVYYGVTIATCVPFDPESKGGSEATVKIAKADLVPSDANLRDEYDSWEALEAACEAFMDKVNNRAHSVTRRRPVDMLAEEQARLHRIPDEPYTVAFGESRSVSWSSTIQFRGARYSVPHSLCDSRVWVRLSGDELVIVHVGDDGPTEVARH 227 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125275.5114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125275.5114.1 >prot_M-pyrifera_M_contig125275.5114.1 ID=prot_M-pyrifera_M_contig125275.5114.1|Name=mRNA_M-pyrifera_M_contig125275.5114.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp MVAIGGHYGITVATCVPADPESKGGSESTVKLAKADLVPTDANLLDDYTSback to top mRNA from alignment at M-pyrifera_M_contig125275:3..515+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125275.5114.1 ID=mRNA_M-pyrifera_M_contig125275.5114.1|Name=mRNA_M-pyrifera_M_contig125275.5114.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig125275:3..515+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125275:3..515+ >mRNA_M-pyrifera_M_contig125275.5114.1 ID=mRNA_M-pyrifera_M_contig125275.5114.1|Name=mRNA_M-pyrifera_M_contig125275.5114.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig125275:3..515+ (Macrocystis pyrifera P11B4 male)back to top |