mRNA_M-pyrifera_M_contig125239.5105.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A7C1GFW1_9BACT (Reactive intermediate/imine deaminase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1GFW1_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 6.170e-10 Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 7 RAGAFVFVSGSGHLSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
+ F+FVSG G +RD +GP + G I ++T +E+L+AVL DAG GLE++V+ T +L++M
Sbjct: 23 KTNGFLFVSGQGPFARDGSGP--IRGTIEEETRTTLENLKAVLADAGAGLEDVVKTTAFLSDM 83
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A2E7QG95_9PROT (2-aminomuconate deaminase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QG95_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 7.580e-10 Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 YRRAGAFVFVSGSGHLSRDSA---------GPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
Y+R+G FVF+SG+ D++ G T +D I QT ACIE++R +L+ AGG LENLVE++T+L +M
Sbjct: 24 YKRSGPFVFISGTSARRSDNSIAGADADALGTTKLD--IGTQTKACIENIRDILKAAGGDLENLVEISTFLLSM 95
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A833IPX6_9GAMM (RidA family protein n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833IPX6_9GAMM) HSP 1 Score: 59.3 bits (142), Expect = 1.600e-9 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 1 YRRAGAFVFVSGSGH---------LSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
Y+RAG F+FVSG+ + D G T +D IR QT A +E++RA+LE AG L+++VEV++YL NM
Sbjct: 23 YKRAGDFIFVSGTSSRRPDNTFEGVEVDELGTTSLD--IRAQTIAVLENIRAILEAAGSSLDDVVEVSSYLVNM 94
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A7X0FWY3_9ACTN (2-aminomuconate deaminase n=7 Tax=Actinomadura TaxID=1988 RepID=A0A7X0FWY3_9ACTN) HSP 1 Score: 58.9 bits (141), Expect = 2.440e-9 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 4 RRAGAFVFVSGSGH---------LSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
RRAG VFVSG+ S D+ G T +D +R+QT A IE++R +LE AGGGL ++V VTTYL +M
Sbjct: 21 RRAGDLVFVSGTSSRRPDGTFAGASADAMGVTDLD--VREQTRAVIENIRDLLEAAGGGLSDVVSVTTYLVSM 91
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A0M8JHZ4_9SPHN (2-aminomuconate deaminase n=7 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A0M8JHZ4_9SPHN) HSP 1 Score: 58.2 bits (139), Expect = 4.840e-9 Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 1 YRRAGAFVFVSGSGH---------LSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
YRRAG FVFVSG+ S D+ G +D I +QT A IE++ A+L DAGG L ++V+VT++L NM
Sbjct: 26 YRRAGDFVFVSGTSSRRADNSFAGASADAFGTVSLD--IAEQTRAVIENIGAILADAGGSLADVVDVTSFLVNM 97
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A2V7Z741_9BACT (2-aminomuconate deaminase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7Z741_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 5.110e-9 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 4 RRAGAFVFVSGSGHLSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
RR G +F+SG G R++ + GI QT ACIE+++A+LEDAG LE +V+VT +L N+
Sbjct: 26 RRLGNLLFLSGIGPRHRETE---QIPEGIEAQTRACIENVKAILEDAGSSLEKVVDVTVFLTNI 86
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A2V7W4V7_9BACT (LigB domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7W4V7_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 5.600e-9 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 4 RRAGAFVFVSGSGHLSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
RR G F+F+SG G + G P I QT ACIE++RAVLEDAG LE +++VT YL +M
Sbjct: 350 RRVGNFLFLSGIGPR-KPVTGEIPGPNDIEVQTRACIENIRAVLEDAGSSLEKVLDVTVYLTDM 412
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A7W9MII3_9ACTN (2-aminomuconate deaminase n=2 Tax=Streptosporangium becharense TaxID=1816182 RepID=A0A7W9MII3_9ACTN) HSP 1 Score: 57.8 bits (138), Expect = 6.580e-9 Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 4 RRAGAFVFVSGSGH---------LSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
RRAG FVFVSG+ S D+ G T +D IR+QT A IE++R +L AGG L + V VTTYL NM
Sbjct: 25 RRAGDFVFVSGTSSRRPDGSFAGASADAMGTTTLD--IREQTRAVIENIRDLLAAAGGELSDAVSVTTYLVNM 95
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A7W8A0A2_9ACTN (2-aminomuconate deaminase n=2 Tax=Nonomuraea TaxID=83681 RepID=A0A7W8A0A2_9ACTN) HSP 1 Score: 57.8 bits (138), Expect = 6.700e-9 Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 YRRAGAFVFVSGSGH---------LSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
+RRAG VFVSG+ S D G T +D IR+QT A IE+L +L+ AGGGL ++V VTTYL +M
Sbjct: 25 FRRAGDLVFVSGTSSRRPDGTFAGASADEMGTTSLD--IREQTRAVIENLADILKAAGGGLADVVNVTTYLVSM 96
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Match: A0A1E4JT90_9SPHN (2-aminomuconate deaminase n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4JT90_9SPHN) HSP 1 Score: 57.8 bits (138), Expect = 6.950e-9 Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 YRRAGAFVFVSGSGH---------LSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGGLENLVEVTTYLANM 195
YRRAG FVFVSG+ S D G +D I +QT A IE++ A+L DAGG L ++V+VT++L NM
Sbjct: 26 YRRAGDFVFVSGTSSRRADNSFAGASADEYGTVSLD--IAEQTRAVIENIGAILADAGGSLADVVDVTSFLVNM 97 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125239.5105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125239.5105.1 >prot_M-pyrifera_M_contig125239.5105.1 ID=prot_M-pyrifera_M_contig125239.5105.1|Name=mRNA_M-pyrifera_M_contig125239.5105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=65bp YRRAGAFVFVSGSGHLSRDSAGPTPVDGGIRQQTTACIESLRAVLEDAGGback to top mRNA from alignment at M-pyrifera_M_contig125239:2..196- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125239.5105.1 ID=mRNA_M-pyrifera_M_contig125239.5105.1|Name=mRNA_M-pyrifera_M_contig125239.5105.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=195bp|location=Sequence derived from alignment at M-pyrifera_M_contig125239:2..196- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125239:2..196- >mRNA_M-pyrifera_M_contig125239.5105.1 ID=mRNA_M-pyrifera_M_contig125239.5105.1|Name=mRNA_M-pyrifera_M_contig125239.5105.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig125239:2..196- (Macrocystis pyrifera P11B4 male)back to top |