mRNA_M-pyrifera_M_contig12522.5100.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A6H5KCE4_9PHAE (ABM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCE4_9PHAE) HSP 1 Score: 212 bits (540), Expect = 6.300e-65 Identity = 108/153 (70.59%), Postives = 117/153 (76.47%), Query Frame = 2
Query: 2 KLGCEEEFETMWRERESSLADFSGFEQFMLLKIDNG----REEKEGGDTNPNNPGYTQFVSHTVWAHQMDFEEWKRSQAFKKSHGGPGKEG-----EKPSFIVAAAGMSKMGDYIVERPVPSLYHAVIMEPVPPEHAGGLWDFEDEPSYFDGD 433
KLGCEEEFETMWRERES LA FSGFEQFMLL++D +EE+EG PGYT+FVSHT WAHQMDFEEWKRSQAFKKSHGG E F+VAA GM KM D I+E PVPSLY+A I+EPVPPEH GGLWDFEDEPSYFDGD
Sbjct: 84 KLGCEEEFETMWRERESKLASFSGFEQFMLLRVDTREAEKKEEEEGAPAA--RPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHGGXXXXXXXXXXELGGFVVAAGGMGKMRDLIMEPPVPSLYNAAIVEPVPPEHQGGLWDFEDEPSYFDGD 234
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: D8LB88_ECTSI (Antibiotic biosynthesis monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB88_ECTSI) HSP 1 Score: 187 bits (475), Expect = 2.080e-56 Identity = 97/143 (67.83%), Postives = 107/143 (74.83%), Query Frame = 2
Query: 32 MWRERESSLADFSGFEQFMLLKIDNGR----EEKEGGDTNPNNPGYTQFVSHTVWAHQMDFEEWKRSQAFKKSH----GGPGK-EGEKPSFIVAAAGMSKMGDYIVERPVPSLYHAVIMEPVPPEHAGGLWDFEDEPSYFDGD 433
MWRERES LA FSGFEQFMLL++D EE+EG PGYT+FVSHT WAHQMDFEEWK SQAFKK H GG GK +GE F+V A GM K+ + IVE PVPSLY+A I+EPVPPEH GGLWDFEDEPSYFDGD
Sbjct: 1 MWRERESKLASFSGFEQFMLLRLDTREVEKNEEEEGAPAA--RPGYTEFVSHTSWAHQMDFEEWKNSQAFKKGHSGGGGGEGKAKGESGGFVVVAGGMGKIRELIVEPPVPSLYNAPIIEPVPPEHQGGLWDFEDEPSYFDGD 141
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A835YW22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW22_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 9.550e-16 Identity = 57/148 (38.51%), Postives = 80/148 (54.05%), Query Frame = 2
Query: 2 KLGCEEEFETMWRERESSLADFSGFEQFMLLK-IDNGREEKEGGDTNPNNPGYTQFVSHTVWAHQMDFEEWKRSQAFKKSHGGPGKEGEKPSFIVAAAGMSKMGDYIVERPVPSLYHAVIMEPVPPEH---AGGLWDFEDEPSYFDGD 433
K+G EE+FE WRER+ SL SGF FML++ D+ E +EGG + G+ F + TVW H+MDF++W+ KK P K K F+ +A + ++ P LY V+ P E GGL+D+E+ P YFDGD
Sbjct: 12 KIGNEEKFEEFWRERKLSLEGQSGFSSFMLVRGEDDFDETQEGGRLARD--GFATFETTTVWLHRMDFDDWRS----KKDS--PDK---KRGFLAMSA--EDVAAMLLAPPEQRLYETVVTLPKAAEENVRLGGLFDWEENPDYFDGD 146
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A6H5KW40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW40_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.040e-14 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 661 SLAPLGDRWWPQAAKQEGDKIS*KILRNTWKQRIERPTVGNVSIRSRNGAPSRKACVVNGQMTKASNK 864
++A +GDRWW Q A ++GD + + L + W++R E P VG VS R RNGAPSRK VVNGQMT ASNK
Sbjct: 128 TIAGIGDRWWAQEAVEDGDNMCKEFLCSLWQKREELPNVGGVSSRGRNGAPSRKGRVVNGQMTTASNK 195
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A6H5KW01_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW01_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 1.660e-14 Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 652 HSHSLAPLGDRWWPQAAKQEGDKIS*KILRNTWKQRIERPTVGNVSIRSRNGAPSRKACVVNGQMTKASNK 864
+S ++A +G+RWW Q A ++GDK+ K L + W++R E P VG VS R RNGAPSRK VVNGQMT ASNK
Sbjct: 464 NSETIAVIGNRWWAQEAVEDGDKMCKKCLCSLWQKRKELPNVGGVSSRGRNGAPSRKGRVVNGQMTTASNK 534
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A6H5JJ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ48_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 8.840e-14 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 661 SLAPLGDRWWPQAAKQEGDKIS*KILRNTWKQRIERPTVGNVSIRSRNGAPSRKACVVNGQMTKASNK 864
++A +GDRWW Q A ++G+K+ + L + W++R E P VG VS R RNGAPSRK VV+GQMT ASNK
Sbjct: 155 TIAVIGDRWWAQEAVEDGNKMCKEFLCSLWQKRKELPNVGGVSSRGRNGAPSRKGRVVDGQMTTASNK 222
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A6H5K1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U0_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.540e-13 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 661 SLAPLGDRWWPQAAKQEGDKIS*KILRNTWKQRIERPTVGNVSIRSRNGAPSRKACVVNGQMTKASNK 864
++A GDRWW Q A ++ DK+ K L + W++R E P VG VS R RNGAPSRK VVNGQMT ASNK
Sbjct: 383 TIAVTGDRWWAQEAVEDRDKMCKKFLCSLWQKRTELPNVGGVSSRGRNGAPSRKGRVVNGQMTTASNK 450
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A6H5KRD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD6_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 1.980e-13 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 661 SLAPLGDRWWPQAAKQEGDKIS*KILRNTWKQRIERPTVGNVSIRSRNGAPSRKACVVNGQMTKASNK 864
++A +GDRWW Q A ++GDK+ + L + W++R E P VG VS RNGAPS K VVNGQMTKASNK
Sbjct: 304 TIAVIGDRWWAQEAVEDGDKMCKEFLCSLWQKRKELPNVGGVSSSGRNGAPSPKGRVVNGQMTKASNK 371
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A6H5KD64_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD64_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 5.330e-13 Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 661 SLAPLGDRWWPQAAKQEGDKIS*KILRNTWKQRIERPTVGNVSIRSRNGAPSRKACVVNGQMTKASNK 864
++A +GDRWW Q A ++GD + + L + W++R E P VG VS R RNG+PSRK VVNGQMT ASNK
Sbjct: 713 TIAVIGDRWWAQEAVEDGDNMCKEFLCSLWQKRKELPNVGGVSSRGRNGSPSRKGRVVNGQMTTASNK 780
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Match: A0A4Y8QCF7_9HYPH (Antibiotic biosynthesis monooxygenase n=8 Tax=Shinella TaxID=323620 RepID=A0A4Y8QCF7_9HYPH) HSP 1 Score: 72.8 bits (177), Expect = 1.180e-12 Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 2
Query: 5 LGCEEEFETMWRERESSLADFSGFEQFMLLKIDNGREEKEGGDTNPNNPGYTQFVSHTVWAHQMDFEEWKRSQAFKKSH 241
+G EE FET+W+ RESSLA+ GF+ F LL+ D EE GYT F SHTVWA + DF W +S+ F+++H
Sbjct: 12 VGHEEAFETIWKGRESSLAEMPGFKTFHLLRGDTDAEE-----------GYTLFASHTVWASKDDFVAWTKSENFRQAH 79 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12522.5100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12522.5100.1 >prot_M-pyrifera_M_contig12522.5100.1 ID=prot_M-pyrifera_M_contig12522.5100.1|Name=mRNA_M-pyrifera_M_contig12522.5100.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp MWRERESSLADFSGFEQFMLLKIDNGREEKEGGDTNPNNPGYTQFVSHTVback to top mRNA from alignment at M-pyrifera_M_contig12522:6854..8660- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12522.5100.1 ID=mRNA_M-pyrifera_M_contig12522.5100.1|Name=mRNA_M-pyrifera_M_contig12522.5100.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1807bp|location=Sequence derived from alignment at M-pyrifera_M_contig12522:6854..8660- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12522:6854..8660- >mRNA_M-pyrifera_M_contig12522.5100.1 ID=mRNA_M-pyrifera_M_contig12522.5100.1|Name=mRNA_M-pyrifera_M_contig12522.5100.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig12522:6854..8660- (Macrocystis pyrifera P11B4 male)back to top |