mRNA_M-pyrifera_M_contig12514.5093.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12514.5093.1
Unique NamemRNA_M-pyrifera_M_contig12514.5093.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 9.660e-81
Identity = 160/384 (41.67%), Postives = 193/384 (50.26%), Query Frame = 1
Query:   10 ITIDYPCPYAIDTEEEATARQLDTSIPGNVVTVEHLRFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGDPGPRWFDFSNAPDVEGFNSSACAADITWAGPRAFHMQ-----EREIR--GMWE--RKSPKEGRGERDESTGGEFDL----------------------------------------------------------------------------------------EQIGPVDGSQEEGGTKKGAGTLAIHIRSGDIFYDDVLADYGQ----FYANVIHSKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            ++++  CPY IDT EEA +R  D S+PGNVV VEHL FCRTGNHFSS FRNLALGYCCKSK+V LPPKDDVLAPGVFN+G PGPRWFDFS+APDV+GF+SSAC+ADITWAG RAFHM      E E    G+ E   ++P+    E       + DL                                                                                                           G L +H+RSGDIF D VLA YGQ    FY  VI    WD ++IVT +     L+PV+ ALQ     G +  ++H+HTNRTM ED+ +M CADGL +ARSTLV L GFHS A  ++ P  C
Sbjct:   88 VSLEGGCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQC 471          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 1.210e-67
Identity = 136/346 (39.31%), Postives = 181/346 (52.31%), Query Frame = 1
Query:   10 ITIDYPCPYAIDTEEEATARQLDTSIPGNVVTVEHLRFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGDPGPRWFDFSNAPDVEGFNSSACAADITWAGPRAFHMQEREIRG------------------------------MWERKSPKEGRGERDESTGGEFDLEQIGPVD--------GSQEEG-------------------GTKKGAGTLAIHIRSGDIFYDDVLADYGQ----FYANVIHSKSWDRIEIVT--YADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            +     CPYAI +EEEA  R  +TS PGNVV V    +CR GN F+S  R+L+LGYCCKS+L+ LPPKD+ LAPG FNEG PGPR FDFS+APDVEGF+ S+C  +ITW G  AFH+Q     G                              M     P +   ERD +     D+ +    D        G + +G                     +  AG L +H+RSGDIF      DYGQ    +Y   I  + WDR+++VT    D    ++PVV AL+   ++G++  N+H H NRT+GED+R M+CADG   ARSTL  +V  HS+A  ++ P +C
Sbjct:  141 VPFSSSCPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFVRPH-PDYGQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMAC 485          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 1.390e-66
Identity = 124/299 (41.47%), Postives = 174/299 (58.19%), Query Frame = 1
Query:   22 YPCPYAIDTEEEATARQLDTSIPGNVVTVEHLRFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGDPGPRWFDFSNAPDVEGFNSSACAADITWAGPRAFHMQ-----ERE-----IRGMWERKSPKEGRGERDESTGGEFDLEQIGPVDGSQE------EGGTKKGAGTLAIHIRSGDIFYDDVLADYGQ----FYANVIHSKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            + C YAI   + A  ++ D++I GNVV V HL+F RTGN F + +RNLALGYCCK+K V LPPKDDVLAPG+FNEG PGPRWFDFS+APDV+G +   C  DI W    A  M      ER      IR    +     G           +  + I      ++      +     GAG L +H+RSGDIF+D V+   GQ    FY  ++  + WDRI++VT      +++PVV AL   ++ G +  N++ HT R+MGED+++M+CAD L +A+S+LV+ + +HS A  ++ P  C
Sbjct:   57 HDCTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLG------CEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRC 349          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 3.260e-66
Identity = 133/335 (39.70%), Postives = 178/335 (53.13%), Query Frame = 1
Query:   28 CPYAIDTEEEATARQL------DTSIPGNVVTVEHLRFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGDPGPRWFDFSNAPDVEGFNSSACAADITWAGPRAFHMQEREIRG----------------------------------MWERKSPKEGRGE---------RDESTGGEFDLEQIGPVDGSQEEGGTKK-------GAGTLAIHIRSGDIFYDDVLADYGQFYANVIHSKSWDRIEIVTYA--DRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            CPYAI  EEE   R        +TS PGNVV V    +CR GN F S  R+L+LGYCCKS+LV LPPKDD LAPG FN+G PGPR FDFS+APDVEGF+SS+C  +I W G +AFH++     G                                  M       EG  +         +D++ G + D E+ G    + E+             AG L +H+RSGDIF       YGQ+Y   I  + WDR+++VT    D+   ++P+V AL+   +KG++  N+H H NRTM ED+ +M+CADG   ARSTL  +V   S+A  ++ P+SC
Sbjct:  146 CPYAILAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQYYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSC 480          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 7.230e-63
Identity = 133/328 (40.55%), Postives = 176/328 (53.66%), Query Frame = 1
Query:    1 RRDITIDYPCPYAIDTEEEATARQLDTSIPGNVVTVEHLRFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGDPGPRWFDFSNAPDVEGFNSSACAADITWAGPRAFHMQEREI------------------------------RGMWERKSPKEGRGERDESTGGEFDLEQIGP-----VDGSQEEGGTKKGAGTLAIHIRSGDIFYDDVLADYGQ----FYANVIHSKSWDRIEIVTYA--DRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADG-LTVARSTLVDLVGFHSNALWLFAPSSC 858
            RR    +  CPY + T  E   R  D +IPGNV+T+   RF R GN F +   NL LGYCCKSKLV LP KDD LAPG+F EG PGPRW+DF+NAPDVEGF++S+C ADITW G  AFH+   +                                G+    S +   G+      G     + GP     + GS+EE G  + A TL IH+RSGDIF D     YGQ    +Y   I  + WDR++IVT     +   ++PV+ AL+   ++G++  N++ H +RTM ED  +MMC  G L  ARS+L  L+  HS+A  L+ P  C
Sbjct:  115 RRHFAFNPDCPYILRTPGERL-RMRDPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDRTATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEG--RPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPC 439          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 6.110e-31
Identity = 97/296 (32.77%), Postives = 140/296 (47.30%), Query Frame = 1
Query:   28 CPYAIDTEEEATARQLDTSIPGNVVTVEHLRFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGD--PGPRWFDFSNA-PDVEGF-----NSSACAADITWAGPRAF---HMQEREIRGMWERKSPKEGRGERDESTGGEFDLEQIGPVDGSQEEGGTKKGAGTLAIHIRSGDIFYDDV----LADYGQ----FYANVIHSKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            CP A+   +   A     S   N +T+      R+GNHF      LA+G+CC+S+L+ LP  D  + PG    G    G RWFDFS   P   GF     N   C   +      AF   H+  R +R M    +    RG      G   DLE   P    ++E G +KGAG+L +HIRSGDIF  +       ++GQ    +Y +V+  K WD +  +T A   + ++P    L+     G +  N+ +  NR++ ED+R M+CAD L  +RS++  L   HS A   F P+ C
Sbjct:   89 CPQALSRSQAEAALDGGNST-SNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAFGYEHIHSRLLRCM----NRVYLRGCEKAYLGKMVDLEGFCP----KQEPGKRKGAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPC 374          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.150e-22
Identity = 87/330 (26.36%), Postives = 149/330 (45.15%), Query Frame = 1
Query:   10 ITIDYPCPYAIDTEEEATARQLDTSIPGNVVTVEHL-RFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVL------------------------APGVFNEGD---------------PGPRWFDFSNAPDVEGFNS--SACAADITWAGPRAFHMQEREIRGMWERKSPKEGRGERDESTGGEFDLEQIGPVDGSQEEGGTKKGAGTLAIHIRSGDIFYDDVLA-DYGQ----FYANVIHSKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            +  D  CP AI + +EA  R+     PG V+T+  + R  R+GNH+ +     ++ +CC+ K++ LP  D  L                        AP  +  G                P  R  D ++A  + G +     C  ++   G  A +++E  + G     SP+    ER++ +  +       P++        ++GAG+L +H+RSGDIF    +   YGQ    +Y  VI SK W+++  VT  +    L+P  + ++   S+G +  N+ +H +R + ED++ M+CAD L ++ ST  +L+  HS A   F P  C
Sbjct:   42 VVQDRGCPQAI-SPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAYLKE-SLGGEHACPSPQRQLAEREDESA-QLVAGTTSPLE--------RRGAGSLVVHVRSGDIFKPGTIYHQYGQPPLLYYLAVIASKPWNKMSFVTSGEDDL-LNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGC 359          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 8.540e-20
Identity = 90/327 (27.52%), Postives = 151/327 (46.18%), Query Frame = 1
Query:   28 CPYAIDTEEEATARQLDTSIPGNVVTVEHL-RFCRTGNHFSSAFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGDPGPRWFDFSNAP-----DVEGFNSSACAADITWAGPRAFHMQEREIR-----GMWER-----------------------------KSPKEGRGERDESTGGEFDLEQIGPVDGSQEE--GGTKKGAG-TLAIHIRSGDIFYDDVLAD---YGQ----FYANVIHSKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            CP AI ++EEA A + D S+PG +++V  L    R+GNH+    R  ++ +CC+ K+V +P +D VL     +  +     + FS+A      +  G+   A   +I    P   H+  ++ +     G+ ER                             +   EG+ ER         L     V+G  +   G + +G G +L +H+RSGDIF  + L+D   YGQ    FY  VI S+ W  I ++T A   ++ +P    LQ    +G +    + + +R +  D+R M+CA+ + +A+S++  L+  HS A   F P+SC
Sbjct:   43 CPQAI-SKEEAAALEADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVRMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDIATDPEIC---PPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCRWKDEGKEERRSL------LRATSAVEGEDKRHAGSSPQGKGQSLVVHMRSGDIFSPE-LSDIPWYGQPPLQFYLKVIGSRPWSNISVLTNARIQREFNPTFGVLQELDKQGLLGAPANFYADRDLYTDLRDMLCAENVVLAKSSITRLLVRHSRAKRFFLPTSC 358          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: D7FSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ7_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 5.640e-11
Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = 1
Query:  502 KGAGTLAIHIRSGDIFY---DDVLADYGQ----FYANVIHSKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPN---LHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            K A +L  H RSGD+F    D     YGQ    +   VI SK W  +  +T  +  + L+P  + ++   S+G +  N   +  +  R++ ED++ M+CAD L+VA STL +L+  HS A   F P  C
Sbjct:  159 KRARSLVFHFRSGDVFKPRKDFHFQTYGQPPLLYVLAVIASKKWSNLTFITNGEHERLLNPTFRVIEELISQGILGTNGTIVETYKKRSLWEDLQAMLCADALSVAHSTLTNLLLAHSRAKMFFLPWGC 287          
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Match: D8LSV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV7_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 2.670e-8
Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 1
Query:  577 QFYANVIHSKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGEDMRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC 858
            QFY  VI S+ W  I ++T A   ++ +P    LQ    +G +    + + +R +  D+R M+CA+ + +A+S++  L+  HS A   F P+SC
Sbjct:   43 QFYLKVIGSRPWSNISVLTNARIQREFNPTFGVLQELDKQGLLGAPANFYPDRDLYTDLRDMLCAENVVLAKSSITRLLVRHSRAKRFFLPTSC 136          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12514.5093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5K2F3_9PHAE9.660e-8141.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7B3_9PHAE1.210e-6739.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G610_ECTSI1.390e-6641.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1L4_ECTSI3.260e-6639.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2M2_ECTSI7.230e-6340.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FRV9_ECTSI6.110e-3132.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7B0_9PHAE1.150e-2226.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0Z0_9PHAE8.540e-2027.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSJ7_ECTSI5.640e-1134.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSV7_ECTSI2.670e-831.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12514contigM-pyrifera_M_contig12514:2372..6729 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size858
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12514.5093.1prot_M-pyrifera_M_contig12514.5093.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12514 2372..6729 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815767.4217093-CDS-M-pyrifera_M_contig12514:2371..25661622815767.4217093-CDS-M-pyrifera_M_contig12514:2371..2566Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 2372..2566 +
1692277559.9512584-CDS-M-pyrifera_M_contig12514:2371..25661692277559.9512584-CDS-M-pyrifera_M_contig12514:2371..2566Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 2372..2566 +
1622815767.4353375-CDS-M-pyrifera_M_contig12514:3346..35481622815767.4353375-CDS-M-pyrifera_M_contig12514:3346..3548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 3347..3548 +
1692277559.9626296-CDS-M-pyrifera_M_contig12514:3346..35481692277559.9626296-CDS-M-pyrifera_M_contig12514:3346..3548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 3347..3548 +
1622815767.4490857-CDS-M-pyrifera_M_contig12514:4588..47701622815767.4490857-CDS-M-pyrifera_M_contig12514:4588..4770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 4589..4770 +
1692277559.9710052-CDS-M-pyrifera_M_contig12514:4588..47701692277559.9710052-CDS-M-pyrifera_M_contig12514:4588..4770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 4589..4770 +
1622815767.461784-CDS-M-pyrifera_M_contig12514:5843..59931622815767.461784-CDS-M-pyrifera_M_contig12514:5843..5993Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 5844..5993 +
1692277559.978261-CDS-M-pyrifera_M_contig12514:5843..59931692277559.978261-CDS-M-pyrifera_M_contig12514:5843..5993Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 5844..5993 +
1622815767.474461-CDS-M-pyrifera_M_contig12514:6600..67291622815767.474461-CDS-M-pyrifera_M_contig12514:6600..6729Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 6601..6729 +
1692277559.9862654-CDS-M-pyrifera_M_contig12514:6600..67291692277559.9862654-CDS-M-pyrifera_M_contig12514:6600..6729Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12514 6601..6729 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12514.5093.1

>prot_M-pyrifera_M_contig12514.5093.1 ID=prot_M-pyrifera_M_contig12514.5093.1|Name=mRNA_M-pyrifera_M_contig12514.5093.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
RRDITIDYPCPYAIDTEEEATARQLDTSIPGNVVTVEHLRFCRTGNHFSS
AFRNLALGYCCKSKLVVLPPKDDVLAPGVFNEGDPGPRWFDFSNAPDVEG
FNSSACAADITWAGPRAFHMQEREIRGMWERKSPKEGRGERDESTGGEFD
LEQIGPVDGSQEEGGTKKGAGTLAIHIRSGDIFYDDVLADYGQFYANVIH
SKSWDRIEIVTYADRPQDLSPVVQALQWAQSKGKIHPNLHIHTNRTMGED
MRTMMCADGLTVARSTLVDLVGFHSNALWLFAPSSC
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mRNA from alignment at M-pyrifera_M_contig12514:2372..6729+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12514.5093.1 ID=mRNA_M-pyrifera_M_contig12514.5093.1|Name=mRNA_M-pyrifera_M_contig12514.5093.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4358bp|location=Sequence derived from alignment at M-pyrifera_M_contig12514:2372..6729+ (Macrocystis pyrifera P11B4 male)
CGACGAGATATCACCATCGACTACCCGTGTCCGTACGCGATCGACACCGA AGAGGAGGCTACAGCGAGACAACTAGACACCTCCATCCCTGGAAACGTTG TCACCGTGGAACACCTGCGATTCTGCCGCACGGGCAACCACTTCAGCAGC GCGTTTCGGAACCTGGCTCTTGGGTACTGCTGCAAGTCAAAGTTGGTGCG TCGTGCCTATCGGTTGTCCCCTCGCTAGAATGGGCTTTGTTTCAAGTATT TATCTATTTTGGGGACTATTTTCGCGCGCATGTACAACCAACAGCCAAAG GACTCCGGCGTCAACTGTGTTTGTCTTTGGACACAACGCATAACGCGAGG CGAGTATTTAGCCACACAATCTATCGCATGGAACAATGCTCGTGTACCAT CCATAATAACACATGGCATACCATGATTAAGTTCTGAACCGCACGACGTT CACATATATGCTTTCTTTCATTATCGTCGCGCGAACGCTTATTATTCACA CGTCTAGCCAAAAAACGAAACTACTAACATCCACAGTGACACATGCCGTA CCATGCCATGCTTTGGTCTTGAAACGCAGGACGTTGAACACGTCGTCTAC TTCAGTGTCCCGAATCGAAAACTTAGCCCTATCGTGTCTATCTAACCATG ACTGCATACCATCCGCAGTGATACATATCAAACAAAGATATCAAAGCTGT AGGATGTCGACCGATTATTCAAAGGGCTTTATCTAGGATAGTCCGTCTAT GTTAATGTTTTTCATATAAGTACGTTTCGTTCGCTCGGACGAACTGCTAA AATCAATTGTGGCCTCTCCGCCATTGGGGCGGAGAAGCCCATGTCAATTC CCTAGTTATACCATGTTCGTAGTCCTAAAACGTAGGACATCCCTCTGCCC TGATGCCAATACTCAATATCATGGGGTACGCATTGCGTTCGCACTCGCAC CGTACAACCAAACTGCCAAGTGAAGGTGGTGCTTCCTCCCAAAGACGACG TCCTGGCCCCGGGCGTGTTCAACGAAGGCGATCCCGGCCCCCGGTGGTTC GACTTCTCCAATGCCCCGGACGTGGAAGGCTTCAACTCGAGCGCATGCGC CGCCGACATCACGTGGGCTGGACCCAGGGCATTCCACATGCAAGAACGTG AGATACGCGGGATGTGGGAGCGAAAATGTTCGCCGTACACAAGATAAGGC TGTTGTTGTATTCGGTGTGCAGCGAAGTTCTACCGTATTGCCCGCAAGAT AGCAGACTCCCCGGGACAAAAGCCCAAGCTGGTGATCCCGGCAACGGGGA GAGTGAATGCAAAAGCTGAGCGCTGCGTCCATGGAAAAACCACGCTGGTA TGCTTCCAAAGGTACCATTTTTGTTGCGCGTGCCCGCTTCTTTGTTTCGG AGAGAGTCGGCTCGGGAAACCAAACCACCCAGTGGGTGTGTTATCTTGCG TGCAATACGGTATGCCATACGCTTGAGTTTGATTGTTGTCCTTCCGTGTT GATGACATATTTTGTTTGTGCCATCTTACCGTTCGGGGGAGCTTTCGGCG CCTAAACTGAACGGCAACGTGCGCTAGAAGATCGGTCTTTTTCGGCGCGT CAAGGTTCAATTTAGCCTAACTCCGCTGTAAGGGGCGGTCAGCCACGGAG TCAAACCGAGGTGTCCTGTTGAATATTTGCGTCTTTACTCAAAGACTGCT TTTGTTTTTAGCTCTTCGGTGCCATGAAGAATGGGAAATGCAGCGTCCGT GTGGATGGAGCGTTCCTTCTCAAAGGTGCTGACACCACTACAAGCTGGGT CCGGTTGCATACGAATCCAGTTCGTGGGGCCACTCTCGCTGCGCTCGGGG CAGCAGAAACTCCCGTTGTGACTGAAGCGTAGACTCCGATGCTGGCGGAA GGCGTTCGTGTAGCGTTCGTGTAGCACACCCTTGCTGTGACTATTGATGA CTGCGACAAGCATTCAGATTAGCGCGTGATGAGCGTTAAGTTGTATCGTA TGCCTCCGGCAGTCGAGCTTCGCTGATACCACCCCGTCCTCGTGTCACAT CTGTCGGTTCGGTATGTTCATCCTATATTTCACCTATAAACTTGCAGTTG AAACCCCGGGTCACCCGCACAACGTTCCAATGCTCAAGGCATGCGTTGCG AAGGTCCCGCGGCTTCTTGGGTGCGAGGCTGCATACTACTTCCCGAAGGG CCTCGACCTGTGCCAAGCCCCCAAGGAAGGGAGGGGAGAAAGAGACGAGA GCACGGGTGGCGAGTTCGACCTGGAACAGATAGGACCGGTGGATGGGAGC CAAGAAGAGGGCGGGACGAAGAAGGGCGCGGGTACCCTGGCGATTCACAT TCGGTCCGGGGACATATTTTACGATGATGTCCTGGCCGACTACGGGCAGG TCAGCTGGAAACCTGATACAACAACCTGATAACGTTATCAATGCCGTCTT TTGTGAGCTGGAAATCTGGTTTCAAGATCAATACGAGTACCCACCCGTTT CTGACCGGGACCCACGGGTTCTCGTGGTATCCTGTGGAACTCTCATTGAA TCCCACGGTATCCTGCGTGGTATCCTGTGGGACTCTCATGGTATCCTGCG GGACACCGTGGGATACCGTGGATTACCCCGCGGGATCCTACGGCAAGTCC CACGGGAAGTCTTGGCAGGCCGTGGATTCCCTCGGGATTTGTCGCATATT TGGCTGCGAGGTCCCACGGGAGCACCCGTAGTAGGATGCGAATACCGACA TACAACTCTTGCCCCTAAATGTAAGAAGCGTTTTTATACTAACATTCAAT AAGAACGGTCCTCAAAGTTATGTACAGAGTGGTACAAATTATATGTATTG ACGCATGCCACGCGGCGGTGTACGGGTGCACGTGTACCGAAATATGTATA AGGTACCCCACTTGAGGGGCTCTCTGTCCCACCCATAACCTGACAAACCA CGAATCAAGAAGAGCAACGCCACGGCCTACAGTTGGTAGATGTACAACGA ACAATGACGCGTGACTACGACAGAGGTAGGTGGAGCACGTTTTGGCAACT TTTTCTGGCCAGAGACGTCTGGCCAGAAACGGTTTCTGAATGACGGGGGC ACCTTATGACCCAAAATCGTCGAGATTTCATTGTTGTGTTGCAAATTGTT TTCGTTCGATTCATTACTTTAGGCAACCGGAATGTTCGTCGGATGGCACT TGCATTTAACCTCCAATATCATATTTTGATTGGGGTATAGAGTTCCTCAT ACTAGAAGATTCAGAAAACAAATGGTGCACATCTAACGAAGCACACGGTC AAATGTTGTACAACACAAATGGCGTTTCGGCGTAGTTTCTCAGCGCTGGT CCAAAAGTGCTACCTCTATGCTAGCACGGGTCTTATATTCAACGTGAACG TCGCCTCCGTCTTACCCTCCCTCTTTTGGACATGCCTGCCATGACGGTGA AAAAAAACAGCCACCGCTGCAGTTCTACGCGAACGTGATTCACAGCAAGT CTTGGGATCGCATAGAAATCGTCACCTACGCCGATCGCCCGCAGGACCTT AGCCCGGTGGTACAAGCACTGCAGTGGGCGCAGTCGAAGGGAAAAATTCA CCCTAACCTCCACATTCACACGGTAAGTGACGCAGGATAGCAGCAGCAGG TGCACCCTAAGCTTCTGAGGCTCCTCACGCGAGCTCTACGCCCCACCGAT GTAGGAGTTTACGGTATGCTTGCGTCAAGATCCTGCACCACGTACCTGGT ACGTCTTCCGTCGCTGAATTTCAGCGGCCCCCGAAAACTGGAGTCTTGGA TTTCGATAGGATTAAAAAACGTGACGAAAATAGCTACGATTGACTGTATC ATCGGCAGCCGCGTGGCTATGGATGGCACGCTCAGTACCGGAACCAGTTG TACAACAAAGCTCGCAGAATGATACTGGCTGTATACCATTACTTCGTACT CATATTAGAACATGGACGACGTATCATTCTTTCAACTACTCATGCTGCTG ATTGCTCTTGCTCACCCTTCCACGGTTTGTTAGACGGGTTATACAGCAAG CTCGCATAATGATGCTGCCGTAACTTACTACTTCAGGTAGCTGTACGTAG CTCACACACTAGACTGTCGGCGAGGCCGAGCATCACTGAGCTATCTTCCG TTACACCTGGGTTCCGAGGGTGAACTAAAAATGTCGGCATATAACACCCA TTTCGATCCGTGCGGCGCACTTGGAGCAGAACCGAACGATGGGCGAAGAC ATGCGTACGATGATGTGCGCTGACGGGCTGACCGTGGCAAGGTCGACACT GGTGGACCTCGTTGGTTTTCACTCCAACGCCTTATGGTTATTCGCTCCCT CGAGTTGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12514:2372..6729+

>mRNA_M-pyrifera_M_contig12514.5093.1 ID=mRNA_M-pyrifera_M_contig12514.5093.1|Name=mRNA_M-pyrifera_M_contig12514.5093.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig12514:2372..6729+ (Macrocystis pyrifera P11B4 male)
CGACGAGATATCACCATCGACTACCCGTGTCCGTACGCGATCGACACCGA
AGAGGAGGCTACAGCGAGACAACTAGACACCTCCATCCCTGGAAACGTTG
TCACCGTGGAACACCTGCGATTCTGCCGCACGGGCAACCACTTCAGCAGC
GCGTTTCGGAACCTGGCTCTTGGGTACTGCTGCAAGTCAAAGTTGCGACG
AGATATCACCATCGACTACCCGTGTCCGTACGCGATCGACACCGAAGAGG
AGGCTACAGCGAGACAACTAGACACCTCCATCCCTGGAAACGTTGTCACC
GTGGAACACCTGCGATTCTGCCGCACGGGCAACCACTTCAGCAGCGCGTT
TCGGAACCTGGCTCTTGGGTACTGCTGCAAGTCAAAGTTGGTGGTGCTTC
CTCCCAAAGACGACGTCCTGGCCCCGGGCGTGTTCAACGAAGGCGATCCC
GGCCCCCGGTGGTTCGACTTCTCCAATGCCCCGGACGTGGAAGGCTTCAA
CTCGAGCGCATGCGCCGCCGACATCACGTGGGCTGGACCCAGGGCATTCC
ACATGCAAGAACGTGAGATACGCGGGATGTGGGAGCGAAAATGTGGTGCT
TCCTCCCAAAGACGACGTCCTGGCCCCGGGCGTGTTCAACGAAGGCGATC
CCGGCCCCCGGTGGTTCGACTTCTCCAATGCCCCGGACGTGGAAGGCTTC
AACTCGAGCGCATGCGCCGCCGACATCACGTGGGCTGGACCCAGGGCATT
CCACATGCAAGAACGTGAGATACGCGGGATGTGGGAGCGAAAATCCCCCA
AGGAAGGGAGGGGAGAAAGAGACGAGAGCACGGGTGGCGAGTTCGACCTG
GAACAGATAGGACCGGTGGATGGGAGCCAAGAAGAGGGCGGGACGAAGAA
GGGCGCGGGTACCCTGGCGATTCACATTCGGTCCGGGGACATATTTTACG
ATGATGTCCTGGCCGACTACGGGCAGCCCCCAAGGAAGGGAGGGGAGAAA
GAGACGAGAGCACGGGTGGCGAGTTCGACCTGGAACAGATAGGACCGGTG
GATGGGAGCCAAGAAGAGGGCGGGACGAAGAAGGGCGCGGGTACCCTGGC
GATTCACATTCGGTCCGGGGACATATTTTACGATGATGTCCTGGCCGACT
ACGGGCAGTTCTACGCGAACGTGATTCACAGCAAGTCTTGGGATCGCATA
GAAATCGTCACCTACGCCGATCGCCCGCAGGACCTTAGCCCGGTGGTACA
AGCACTGCAGTGGGCGCAGTCGAAGGGAAAAATTCACCCTAACCTCCACA
TTCACACGTTCTACGCGAACGTGATTCACAGCAAGTCTTGGGATCGCATA
GAAATCGTCACCTACGCCGATCGCCCGCAGGACCTTAGCCCGGTGGTACA
AGCACTGCAGTGGGCGCAGTCGAAGGGAAAAATTCACCCTAACCTCCACA
TTCACACGAACCGAACGATGGGCGAAGACATGCGTACGATGATGTGCGCT
GACGGGCTGACCGTGGCAAGGTCGACACTGGTGGACCTCGTTGGTTTTCA
CTCCAACGCCTTATGGTTATTCGCTCCCTCGAGTTGTAACCGAACGATGG
GCGAAGACATGCGTACGATGATGTGCGCTGACGGGCTGACCGTGGCAAGG
TCGACACTGGTGGACCTCGTTGGTTTTCACTCCAACGCCTTATGGTTATT
CGCTCCCTCGAGTTGT
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