mRNA_M-pyrifera_M_contig124916.5066.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A356TH77_9DELT (CHASE domain-containing protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A356TH77_9DELT) HSP 1 Score: 118 bits (295), Expect = 4.300e-29 Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 1 LMAIQSIADYLADGNGGADGDFVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVDGKSSL 444
L+A++SI G + FV + +Q+ GG+ A+NW+APDGTI V P E N+ A G+++ HP A +A RTR P T P+ LFQG G ATY PV + E+IG++N VF ++ LVE SL G+L++H L I + +L
Sbjct: 80 LVAVESIRRIREAGLMDEEATFVRSATIVQNELGGYLAINWIAPDGTIVWVSPAERNAAARGRNVFRHPQASPAAREAERTRRPSATPPIPLFQGIAGFATYYPVIVEGELIGFVNGVFDIRGLVEASLEEGILEAHELRITTDEGAL 227
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A520QJZ8_9DELT (Histidine kinase n=2 Tax=Myxococcales TaxID=29 RepID=A0A520QJZ8_9DELT) HSP 1 Score: 118 bits (295), Expect = 5.400e-28 Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 1 LMAIQSIADYLADGNGGADGDFVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVDGKSSL 444
L+A++SI G + FV + +Q+ GG+ A+NW+APDGTI V P E N+ A G+++ HP A +A RTR P T P+ LFQG G ATY PV + E+IG++N VF ++ LVE SL G+L++H L I + +L
Sbjct: 59 LVAVESIRRIREAGLMDEEATFVRSATIVQNELGGYLAINWIAPDGTIVWVSPAERNAAARGRNVFRHPQASPAAREAERTRRPSATPPIPLFQGIAGFATYYPVIVEGELIGFVNGVFDIRGLVEASLEEGILEAHELRITTDEGAL 206
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A3A4JVR3_9DELT (Histidine kinase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3A4JVR3_9DELT) HSP 1 Score: 113 bits (283), Expect = 2.350e-26 Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 64 FVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVDG 432
F + +LQ G QA+NWV PDGTIE VVP N A G++L HP A FL A T + +LT P+EL QGGRG+A Y+PV + IG+LN VFR+ L+E +L G+ D ++I DG
Sbjct: 83 FSRYAMNLQRQLSGLQAVNWVGPDGTIEWVVPEGPNRLAQGRNLKQHPGAASTFLAAAETGQMRLTPPIELLQGGRGIAAYIPVIEGGQTIGFLNPVFRIDTLMEDALAKGVRDHFAVTISDG 205
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A7C3H1V7_9BACT (CHASE domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C3H1V7_9BACT) HSP 1 Score: 105 bits (262), Expect = 1.480e-25 Identity = 50/112 (44.64%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 61 DFVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDR-DEEIIGYLNAVFRMQQLVERSLGA 393
DF+ R++ + GFQA+NW+ P G I++V P+E N ALG+ L HP A + F+ A + REP +T + LFQGG G A+Y PV R D +++GY+N VFR++ ++ +LGA
Sbjct: 78 DFIHRAEMIYQAAPGFQAINWIDPQGRIQLVFPQEGNLPALGRDLHTHPDAAEFFILAEQKREPTITPAVRLFQGGLGFASYWPVVRPDGQLLGYVNGVFRLRSALDAALGA 189
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A2A5DE56_9BACT (Histidine kinase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A5DE56_9BACT) HSP 1 Score: 108 bits (271), Expect = 8.850e-25 Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 61 DFVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLE-LFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVD 429
+F +S +Q FGGFQALNW+ TI VVP N ALGK +L+ P + A RT +P L+ P+E LFQGGRG ATY PV R+EE++G++N VFR ++E +L +G+ D +++ I D
Sbjct: 79 EFREQSIIIQKAFGGFQALNWINHQYTISWVVPMHGNEAALGKYILDSPNSIVGIQGAARTNQPGLSQPIESLFQGGRGFATYFPVRRNEELLGFVNGVFRTNFMLEEALNSGVRDLYSVHISD 202
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A2D9TAZ7_9DELT (Histidine kinase n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TAZ7_9DELT) HSP 1 Score: 105 bits (262), Expect = 1.110e-23 Identity = 55/122 (45.08%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 70 ARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVDGK 435
AR++ Q+ +GGFQ +NW+ G I V P E N ALG+S+ +HPIA F AR P +T LELFQGGRG ATY P + D Y+N VFR++ LVE +L G LD + +++ D +
Sbjct: 86 ARAEVAQELYGGFQGINWLDDAGVIRFVAPLEPNRNALGRSVRDHPIAHTAFERARADGSPHMTEALELFQGGRGFATYYPFE-DAGERRYVNGVFRIKPLVETALRGGFLDEYAVALRDDR 206
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A545U2S6_9PROT (Histidine kinase n=2 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545U2S6_9PROT) HSP 1 Score: 103 bits (257), Expect = 7.120e-23 Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 1 LMAIQSIADYLADGNGGADGDFVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVDGKSSL 444
L I+ I + G +V +SLQ F GFQA+NWV P+G I+ V P N ALG +L HPIAG+ R+ T P+ L QGG+G T+ P+ RD + GYLN VFR++ L+ +L + ++I DG+ +L
Sbjct: 63 LSIIEHIRNLWMKGQINNHDAYVETVESLQLQFSGFQAINWVNPEGVIQWVAPVAGNGPALGANLAEHPIAGELMERTLRSNRDMATRPVMLLQGGKGFTTFYPLIRDGRLEGYLNGVFRVESLMTEALAQVARSDYRITIRDGEHAL 210
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A7X7Z1Z5_9DELT (Histidine kinase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7Z1Z5_9DELT) HSP 1 Score: 102 bits (253), Expect = 2.550e-22 Identity = 53/125 (42.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 61 DFVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVDGK 435
DF ++ L F G QA+NW+ +G I +VP +AN A K L HP A FL+A RT + Q+T P+ L QGG G A Y P++ E GYLNAVFR+ L+E L G+ + I DG+
Sbjct: 80 DFRLQATDLISQFSGLQAINWIDREGFIRWIVPEDANLAAKDKDLKKHPQAAQTFLNAMRTGKIQVTPPVMLLQGGHGFAAYFPLEVQGERQGYLNAVFRLDPLIEGCLAHGIQQQFSFVIRDGE 204
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A1Q4UTN4_9PROT (Diguanylate cyclase n=2 Tax=Thalassospira TaxID=168934 RepID=A0A1Q4UTN4_9PROT) HSP 1 Score: 99.8 bits (247), Expect = 1.590e-21 Identity = 58/150 (38.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 1 LMAIQSIADYLADGNGGADGDFVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHPIAGDPFLD-ARRTREPQLTAPLELFQGGRGVATYMPVDRDE-EIIGYLNAVFRMQQLVERSLGAGMLDSHTLSIVDGKSSL 444
L A+++ AD + ++A++ LQ F QA+NW++P+ I+ V P + N A+G L HP+AG P LD A R+ Q+T LEL QGGRG A Y+PV E EIIG +N VFR++ ++ LG+ L +T+ + + S L
Sbjct: 76 LHALENFADNWRGNAPEDERQYIAQAAPLQSRFEALQAINWISPNYIIKYVAPIKGNVSAMGADLKRHPVAG-PVLDMAFDQRQTQITPTLELLQGGRGFAAYVPVITPEGEIIGMVNGVFRIRSMLATILGSDYLADYTIRVRENASVL 224
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Match: A0A3M1SLI2_9BACT (PAS domain S-box protein (Fragment) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A3M1SLI2_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 3.940e-21 Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 64 FVARSQSLQDNFGGFQALNWVAPDGTIEVVVPREANSGALGKSLLNHP--IAGDPFLDARRTREPQLTAPLELFQGGRGVATYMPVDRDEEIIGYLNAVFRMQQLVERSL 387
F ++ + ++ F+A+NW+ +G I+++ P+E N GALGK++ NHP F +A T E T ++LFQGG+GVA+Y PV +D IIGYLN VFR+ ++ +L
Sbjct: 79 FPIVTEPIHESLSEFRAINWIDKEGVIKIISPKEGNEGALGKNVKNHPSYTVRAAFTEAEETGEYSFTGVIDLFQGGKGVASYFPVRKDGRIIGYLNGVFRIIPILRDAL 188 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124916.5066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124916.5066.1 >prot_M-pyrifera_M_contig124916.5066.1 ID=prot_M-pyrifera_M_contig124916.5066.1|Name=mRNA_M-pyrifera_M_contig124916.5066.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp MAIQSIADYLADGNGGADGDFVARSQSLQDNFGGFQALNWVAPDGTIEVVback to top mRNA from alignment at M-pyrifera_M_contig124916:2..445+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124916.5066.1 ID=mRNA_M-pyrifera_M_contig124916.5066.1|Name=mRNA_M-pyrifera_M_contig124916.5066.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig124916:2..445+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124916:2..445+ >mRNA_M-pyrifera_M_contig124916.5066.1 ID=mRNA_M-pyrifera_M_contig124916.5066.1|Name=mRNA_M-pyrifera_M_contig124916.5066.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig124916:2..445+ (Macrocystis pyrifera P11B4 male)back to top |