mRNA_M-pyrifera_M_contig124850.5050.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A6A3L579_9STRA (Eukaryotic translation initiation factor 3 subunit C n=22 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3L579_9STRA) HSP 1 Score: 196 bits (497), Expect = 5.870e-55 Identity = 95/174 (54.60%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +Q+ ADIPTQIL NR M +LG+CAF GL +EAH CLS++C+GSR KELL QG + RYG+R E E+L +R VPYHMHINLD+LET HL++AML+EVPN+ L R+R +S+A RK +++ +R + P EN R+ VVAA+KLL QG W+K+
Sbjct: 588 HDRFHEARDLLLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLVWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNSRLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWRKS 761
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A0N7L6P5_PLAHL (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6P5_PLAHL) HSP 1 Score: 195 bits (496), Expect = 8.790e-55 Identity = 95/174 (54.60%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +Q+ ADIPTQIL NR M +LG+CAF GL +EAH CLS++C+GSR KELL QG + RYG+R E E+L +R VPYHMHINLD+LET HL++AML+EVPN+ L R+R +S+A RK +++ +R + P EN R+ VVAA+KLL QG W+K+
Sbjct: 610 HDRFHEARDLLLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNARLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWRKS 783
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A662Y4U0_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4U0_9STRA) HSP 1 Score: 195 bits (496), Expect = 9.100e-55 Identity = 95/174 (54.60%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +Q+ ADIPTQIL NR M +LG+CAF GL +EAH CLS++C+GSR KELL QG + RYG+R E E+L +R VPYHMHINLD+LET HL++AML+EVPN+ L R+R +S+A RK +++ +R + P EN R+ VVAA+KLL QG W+K+
Sbjct: 619 HDRFHEARDLLLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNSRLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWRKS 792
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A421GR70_9STRA (Eukaryotic translation initiation factor 3 subunit C n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GR70_9STRA) HSP 1 Score: 194 bits (493), Expect = 3.280e-54 Identity = 94/174 (54.02%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +Q+ ADIPTQIL NR M +LG+CAF GL +EAH CLS++C+GSR KELL QG + RYG+R E E+L +R VPYHMHINLD+LET HL++AML+EVPN+ L R+R +S+A RK +++ +R + P EN R+ VV+A+KLL QG W+K+
Sbjct: 1137 HDRFHEARDLLLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNSRLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVSAAKLLAQGSWRKS 1310
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A484DRR6_BRELC (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRR6_BRELC) HSP 1 Score: 187 bits (475), Expect = 6.660e-52 Identity = 92/174 (52.87%), Postives = 126/174 (72.41%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +Q+ ADIPTQIL NR M +LG+CAF GL +EAH CLS++C+GSR KELL QG + RYG+R E E+L +R VPYHMHINLD+LET HL++AML+EVPN+ + R+R +S+A RK +++ +R + P EN R+ VVAA K L QG W+++
Sbjct: 610 HDRFHEARDLLLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNPNVTDRKRIVSKAFRKLLEFHERLVFEGPPENPRDHVVAAVKHLAQGSWRQS 783
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A2K1KPT1_PHYPA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KPT1_PHYPA) HSP 1 Score: 187 bits (474), Expect = 8.760e-52 Identity = 91/172 (52.91%), Postives = 128/172 (74.42%), Query Frame = 1
Query: 7 EFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTT-NRYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
EFY RDL+LM+ +QE+ + DI TQIL NRAM +LG+CAF + L EAHNCLS+L +G R+KELL QG + +RY ++ E EKL +R +P+HMHINL++LE VHLITAML+EVPN+A+ + +R+ IS+ R+ +D ++Q + P EN R+ V+AA++ L +GDWKKA
Sbjct: 532 EFYTARDLLLMSHLQESVMNMDISTQILFNRAMAQLGLCAFRESLVTEAHNCLSELYAGGRVKELLAQGVSQSRYHEKNPEQEKLERRRQMPFHMHINLELLEAVHLITAMLLEVPNMASSVHDMKRKMISKPFRRLLDINEKQMFTGPPENVRDHVMAATRALSKGDWKKA 703
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A8K1C5H8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H8_PYTOL) HSP 1 Score: 186 bits (473), Expect = 1.260e-51 Identity = 93/173 (53.76%), Postives = 124/173 (71.68%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKK 513
H F++ RDL+LM+ +Q+ ADIPTQIL NR M +LG+ AF GL +EAH CLS++C+GSR KELL QG + RY +R E E+L +R VPYHMHINLD+LET HL++AML+EVPN+ R+R +S+A RK +++ +R + P EN R+ VVAA+KLL QG WKK
Sbjct: 606 HDRFHEARDLLLMSHIQDNITDADIPTQILFNRMMAQLGLSAFRAGLIWEAHACLSEICTGSRTKELLAQGMQSFRYQERDPEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNTRASDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWKK 778
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A6G0WWC9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWC9_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.740e-51 Identity = 90/174 (51.72%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +QE DI TQIL NR M +LG+CAF GL +EAH CLS++C+GS+ KELL QG + R+ +R E E+L KR VPYHMHINL++LE HL +AML+EVPN+ + RRR +S+A RK +++ DR +A P ENTR+ +VAA+K + QG W+K+
Sbjct: 613 HDRFHEARDLLLMSHLQETIVHTDIATQILFNRMMAQLGLCAFRLGLIWEAHACLSEICTGSKTKELLAQGVASFRHQERNPEEERLEKRRQVPYHMHINLELLEVAHLTSAMLLEVPNMVLARTQDRRRVLSKAFRKLLEFHDRLIFAGPPENTRDHIVAAAKYMSQGQWQKS 786
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: W4GR61_9STRA (Eukaryotic translation initiation factor 3 subunit C n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GR61_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.330e-51 Identity = 90/174 (51.72%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +Q+ DI TQIL NR M +LG+CAF GLT+EAH CLS++C+GS+ KELL QG + R+ +R + E+L KR VPYHMHINL++LE HL +AML+EVPN+ + RRR IS+A RK +++ DR +A P ENTR+ +VAA+K L QG W+++
Sbjct: 598 HDRFHEARDLLLMSHLQDTILHTDIATQILFNRMMAQLGLCAFRLGLTWEAHACLSEICTGSKTKELLAQGMASFRHQERNADEERLEKRRQVPYHMHINLELLEVAHLTSAMLLEVPNMVLSRTQDRRRVISKAFRKLLEFHDRLVFAGPPENTRDHIVAAAKYLSQGQWQRS 771
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A485LEA6_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEA6_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.400e-51 Identity = 90/174 (51.72%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 1 HGEFYKGRDLMLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 516
H F++ RDL+LM+ +Q+ DI TQIL NR M +LG+CAF GL +EAH CLS++C+GS+ KELL QG + R+ +R E E+L KR VPYHMHINL++LE HL +AML+EVPN+ + RRR +S+A RK +++ DR +A P ENTR+ VVAA+K + QG W+K+
Sbjct: 610 HDRFHEARDLLLMSHLQDTIAHTDIATQILFNRMMAQLGLCAFRLGLVWEAHACLSEICTGSKTKELLAQGMASFRHQERNPEEERLEKRRQVPYHMHINLELLEVAHLTSAMLLEVPNMVLSRTQDRRRVLSKAFRKLLEFHDRLVFAGPPENTRDHVVAAAKFMSQGQWQKS 783 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124850.5050.1 >prot_M-pyrifera_M_contig124850.5050.1 ID=prot_M-pyrifera_M_contig124850.5050.1|Name=mRNA_M-pyrifera_M_contig124850.5050.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSback to top mRNA from alignment at M-pyrifera_M_contig124850:1..516- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124850.5050.1 ID=mRNA_M-pyrifera_M_contig124850.5050.1|Name=mRNA_M-pyrifera_M_contig124850.5050.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig124850:1..516- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124850:1..516- >mRNA_M-pyrifera_M_contig124850.5050.1 ID=mRNA_M-pyrifera_M_contig124850.5050.1|Name=mRNA_M-pyrifera_M_contig124850.5050.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig124850:1..516- (Macrocystis pyrifera P11B4 male)back to top |