mRNA_M-pyrifera_M_contig124687.5026.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig124687.5026.1
Unique NamemRNA_M-pyrifera_M_contig124687.5026.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A6I6A5Z6_9PLAN (Uncharacterized protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A5Z6_9PLAN)

HSP 1 Score: 302 bits (773), Expect = 1.260e-102
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1
Query:    1 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ
Sbjct:  102 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 242          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A6CDL8_9PLAN (Uncharacterized protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6CDL8_9PLAN)

HSP 1 Score: 251 bits (642), Expect = 1.090e-82
Identity = 110/141 (78.01%), Postives = 126/141 (89.36%), Query Frame = 1
Query:    1 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            KNYLNTQRPA+IHVF P++ F   MTE+YER LDQKLGTPYSIRHHLTG RA GIHCAEYA+DALSACHLM+A++P KVSPASL+ GIVQA RY P++TF LE+PP + EKPRNWCHQ+W+DT+NCTSACCVKLRGWVLCQ
Sbjct:  102 KNYLNTQRPATIHVFQPKTTFNPTMTEQYERYLDQKLGTPYSIRHHLTGVRARGIHCAEYAIDALSACHLMKAQAPAKVSPASLVTGIVQADRYSPSITFALERPPLVAEKPRNWCHQLWVDTRNCTSACCVKLRGWVLCQ 242          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A518IB37_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IB37_9PLAN)

HSP 1 Score: 246 bits (628), Expect = 1.470e-80
Identity = 106/141 (75.18%), Postives = 125/141 (88.65%), Query Frame = 1
Query:    1 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            KNYLNTQRPA+IHVF P++AF   MT +YER LD KLGTPYSI+HHLTG RA G+HCAEYA+DALSAC+LM+A +P KVSPASL+ GIVQ++RYVP++TF LE+PP + EKPR WCHQ+WIDTKNCTSACC+KLRGWVLCQ
Sbjct:  102 KNYLNTQRPATIHVFQPKAAFDQRMTAQYERFLDHKLGTPYSIKHHLTGNRAKGVHCAEYAIDALSACNLMKANAPAKVSPASLVTGIVQSERYVPSITFALERPPLVAEKPRGWCHQLWIDTKNCTSACCIKLRGWVLCQ 242          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A517VZ43_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZ43_9PLAN)

HSP 1 Score: 235 bits (599), Expect = 3.890e-76
Identity = 101/141 (71.63%), Postives = 121/141 (85.82%), Query Frame = 1
Query:    1 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            KNYLNTQRPA+IH+F P++ F   MT EYE  LDQKLGTPYSI+HHLTG RA GIHCAEYA+DALSAC+LM+A +P KVSPASL+ GIV++ RY P++TFEL++PP + EK  +WCHQ+WIDTKNCTSACC+KLRGWV CQ
Sbjct:  103 KNYLNTQRPATIHIFQPKTKFNPSMTAEYEHYLDQKLGTPYSIKHHLTGSRAKGIHCAEYAIDALSACNLMKANAPAKVSPASLVTGIVKSDRYTPSITFELKRPPRVSEKSSSWCHQLWIDTKNCTSACCIKLRGWVFCQ 243          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A517Z433_9PLAN (Uncharacterized protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z433_9PLAN)

HSP 1 Score: 165 bits (418), Expect = 6.420e-49
Identity = 77/141 (54.61%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            K YL TQ P  IHV+HPR   T E  E+    L  ++GTPY+IRHHL+GKRA+G+HCAEYA DAL +  L+ A  PPKVSPASL +G+     Y    T ELE       K  NWCHQ+WIDTK CTS CC KL  W LC+
Sbjct:   85 KEYLATQAPTVIHVYHPRKRLTREQEEQLRAHLQSRIGTPYAIRHHLSGKRADGLHCAEYATDALMSAGLIHAHRPPKVSPASLAEGVTIHHIYDDGRTIELEVESVPPPKGSNWCHQLWIDTKVCTSNCCSKLSSWFLCR 225          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A2D6SWC5_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SWC5_9PLAN)

HSP 1 Score: 164 bits (415), Expect = 2.310e-48
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    1 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            +NYL +Q P  IH+  P    +   + E+   LD +LG PY+++HHLTGK A GIHCAEYA+ ALSA  LM+AK P KVSP SL++G+V+A RY    T  L + PA   K  NWC Q+WIDTK CT+ CC K+ GW LC+
Sbjct:   93 ENYLKSQNPYEIHILQPAKRLSKRQSREFASHLDSQLGRPYAVKHHLTGKSATGIHCAEYAIKALSAADLMRAKRPAKVSPGSLVRGVVKANRYSAGRTVLLREKPAPPPKGANWCDQMWIDTKTCTANCCRKMSGWFLCR 233          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A2E0SKW3_9PLAN (Uncharacterized protein n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SKW3_9PLAN)

HSP 1 Score: 161 bits (407), Expect = 1.050e-46
Identity = 69/138 (50.00%), Postives = 97/138 (70.29%), Query Frame = 1
Query:    7 YLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLC 420
            YL+TQ+P  +H+ HPR A+T    E +   L+ ++GTPYS++HHLTG+R++GIHCAEY +DAL+ C +M+AK+PP+VSPASLL+G V++ RY P  +F +  P    E    WC Q+WIDT +CTS C  + R  V C
Sbjct:  132 YLSTQQPDELHLLHPRVAWTQPQQEAFVAALESRMGTPYSVKHHLTGRRSDGIHCAEYVIDALAECDVMRAKNPPRVSPASLLQGGVESDRYQPVRSFAIHPPEVPTEVADGWCEQMWIDTCDCTSNCWTRFRKMVFC 269          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A518CL06_9PLAN (Uncharacterized protein n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CL06_9PLAN)

HSP 1 Score: 157 bits (396), Expect = 4.780e-45
Identity = 67/139 (48.20%), Postives = 96/139 (69.06%), Query Frame = 1
Query:    7 YLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            YL+TQ P  +H+ HP++  T+   + +   L+ K+GTPYS+RHHLTG RA G+HCAEY +DAL+ C LM+A++PP+VSPASLL+G + A  Y P  +F ++ P A VE   +WC Q+W+DT +CTS   ++ R  V C 
Sbjct:  132 YLSTQLPDELHLLHPQAKLTSNQEKAFTDALEAKIGTPYSVRHHLTGNRAEGVHCAEYVIDALNECDLMRAENPPRVSPASLLRGSIGAGLYQPVRSFAIQPPLAPVEVANSWCEQLWVDTCDCTSYSWIRFRKLVFCH 270          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A517ZNG0_9PLAN (Uncharacterized protein n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZNG0_9PLAN)

HSP 1 Score: 149 bits (377), Expect = 1.010e-42
Identity = 69/139 (49.64%), Postives = 90/139 (64.75%), Query Frame = 1
Query:    7 YLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFEL-EKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLC 420
            YL +Q P  IH+  PR  FT      +   L+++LG PYS++HHLTG RA G+HCAEY MDAL A ++M AK+PP+VSPASL  G  + + YVP +T  + E  P   EK  +WC Q W+DTK CT  C +K+RGW  C
Sbjct:   89 YLKSQSPGEIHIVRPRCQFTKLQCRRFRAELEEQLGRPYSVKHHLTGNRAEGLHCAEYVMDALMAANVMTAKNPPRVSPASLHTGAHKKQTYVPELTVTVCEVTP---EKGDSWCSQTWLDTKRCTKRCYLKMRGWFCC 224          
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Match: A0A3E0Q0P3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q0P3_9BACT)

HSP 1 Score: 144 bits (362), Expect = 2.140e-40
Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 1
Query:    1 KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGKRAN-GIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTFELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ 423
            + YL +Q P  IH+FHP    T E + E E  L+ +LGTPY++ HH+TG R+  G+HCAEY  DAL +  L++A+ PPKVSPASL +GI + + Y   VT ++ +P        +WC ++W DTK C + CC +L GW LC+
Sbjct:   89 ERYLASQVPDEIHLFHPSRRLTDEESRELETALEDRLGTPYAVMHHVTGNRSEKGVHCAEYVTDALMSVGLIRAERPPKVSPASLAEGITKNEIYTNGVTIQVARPEPTPPDDASWCGRMWFDTKLCCTRCCDQLTGWFLCR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124687.5026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6I6A5Z6_9PLAN1.260e-102100.00Uncharacterized protein n=7 Tax=Gimesia TaxID=1649... [more]
A6CDL8_9PLAN1.090e-8278.01Uncharacterized protein n=8 Tax=Planctomycetaceae ... [more]
A0A518IB37_9PLAN1.470e-8075.18Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A517VZ43_9PLAN3.890e-7671.63Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A517Z433_9PLAN6.420e-4954.61Uncharacterized protein n=1 Tax=Maioricimonas rari... [more]
A0A2D6SWC5_9PLAN2.310e-4851.77Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E0SKW3_9PLAN1.050e-4650.00Uncharacterized protein n=1 Tax=Planctomyces sp. T... [more]
A0A518CL06_9PLAN4.780e-4548.20Uncharacterized protein n=1 Tax=Polystyrenella lon... [more]
A0A517ZNG0_9PLAN1.010e-4249.64Uncharacterized protein n=3 Tax=Symmachiella TaxID... [more]
A0A3E0Q0P3_9BACT2.140e-4045.07Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124687contigM-pyrifera_M_contig124687:91..516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score132.1
Seed ortholog evalue2e-28
Seed eggNOG ortholog1123242.JH636435_gene2715
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
EggNOG OGs2CEDH@1,2J31I@203682,33X2E@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size426
Cds size426
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815764.4458895-CDS-M-pyrifera_M_contig124687:90..5161622815764.4458895-CDS-M-pyrifera_M_contig124687:90..516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124687 91..516 -
1692277558.616661-CDS-M-pyrifera_M_contig124687:90..5161692277558.616661-CDS-M-pyrifera_M_contig124687:90..516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124687 91..516 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124687.5026.1prot_M-pyrifera_M_contig124687.5026.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig124687 91..516 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig124687.5026.1

>prot_M-pyrifera_M_contig124687.5026.1 ID=prot_M-pyrifera_M_contig124687.5026.1|Name=mRNA_M-pyrifera_M_contig124687.5026.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
KNYLNTQRPASIHVFHPRSAFTAEMTEEYERLLDQKLGTPYSIRHHLTGK
RANGIHCAEYAMDALSACHLMQAKSPPKVSPASLLKGIVQAKRYVPAVTF
ELEKPPAIVEKPRNWCHQIWIDTKNCTSACCVKLRGWVLCQ*
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mRNA from alignment at M-pyrifera_M_contig124687:91..516-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig124687.5026.1 ID=mRNA_M-pyrifera_M_contig124687.5026.1|Name=mRNA_M-pyrifera_M_contig124687.5026.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig124687:91..516- (Macrocystis pyrifera P11B4 male)
AAAAACTACCTGAATACACAGCGTCCCGCTTCGATCCATGTCTTTCACCC ACGGTCCGCTTTCACTGCAGAGATGACCGAGGAATACGAACGACTGCTCG ATCAGAAACTGGGCACACCCTATTCCATCAGGCATCACCTCACGGGCAAA CGCGCGAATGGCATTCACTGTGCAGAATACGCCATGGACGCCCTCTCTGC CTGTCACCTGATGCAGGCCAAATCGCCCCCCAAGGTGTCCCCGGCTTCGC TGCTGAAGGGGATCGTCCAGGCAAAACGCTACGTACCCGCGGTTACCTTC GAACTGGAAAAGCCACCTGCGATCGTCGAAAAGCCGCGCAACTGGTGTCA CCAGATCTGGATCGACACCAAAAACTGCACCTCAGCCTGCTGTGTGAAAC TGCGTGGCTGGGTTCTCTGTCAGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig124687:91..516-

>mRNA_M-pyrifera_M_contig124687.5026.1 ID=mRNA_M-pyrifera_M_contig124687.5026.1|Name=mRNA_M-pyrifera_M_contig124687.5026.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig124687:91..516- (Macrocystis pyrifera P11B4 male)
AAAAACTACCTGAATACACAGCGTCCCGCTTCGATCCATGTCTTTCACCC
ACGGTCCGCTTTCACTGCAGAGATGACCGAGGAATACGAACGACTGCTCG
ATCAGAAACTGGGCACACCCTATTCCATCAGGCATCACCTCACGGGCAAA
CGCGCGAATGGCATTCACTGTGCAGAATACGCCATGGACGCCCTCTCTGC
CTGTCACCTGATGCAGGCCAAATCGCCCCCCAAGGTGTCCCCGGCTTCGC
TGCTGAAGGGGATCGTCCAGGCAAAACGCTACGTACCCGCGGTTACCTTC
GAACTGGAAAAGCCACCTGCGATCGTCGAAAAGCCGCGCAACTGGTGTCA
CCAGATCTGGATCGACACCAAAAACTGCACCTCAGCCTGCTGTGTGAAAC
TGCGTGGCTGGGTTCTCTGTCAGTAAAAAAACTACCTGAATACACAGCGT
CCCGCTTCGATCCATGTCTTTCACCCACGGTCCGCTTTCACTGCAGAGAT
GACCGAGGAATACGAACGACTGCTCGATCAGAAACTGGGCACACCCTATT
CCATCAGGCATCACCTCACGGGCAAACGCGCGAATGGCATTCACTGTGCA
GAATACGCCATGGACGCCCTCTCTGCCTGTCACCTGATGCAGGCCAAATC
GCCCCCCAAGGTGTCCCCGGCTTCGCTGCTGAAGGGGATCGTCCAGGCAA
AACGCTACGTACCCGCGGTTACCTTCGAACTGGAAAAGCCACCTGCGATC
GTCGAAAAGCCGCGCAACTGGTGTCACCAGATCTGGATCGACACCAAAAA
CTGCACCTCAGCCTGCTGTGTGAAACTGCGTGGCTGGGTTCTCTGTCAGT
AA
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