mRNA_M-pyrifera_M_contig124612.5003.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: I2JJ41_9GAMM (DNA helicase n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=I2JJ41_9GAMM) HSP 1 Score: 306 bits (785), Expect = 8.650e-95 Identity = 151/172 (87.79%), Postives = 163/172 (94.77%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNVTAGK 516
AQF +SW NRGPVDHGYAEDYRRIGERLVQ+LI+TRQGRQ+VKPEVLQVSFPEGEISVLPDE+TLDTDGKY+IRRI+SG K SDEFDRIEYTLLLEAAER+FGHGTRVEAVHLAGETQEQVTVT+ KKSARLSK QSA+GAIAQG+FPAKPE+RTCPR PSFFICG V AGK
Sbjct: 967 AQFTRSWFNRGPVDHGYAEDYRRIGERLVQFLIQTRQGRQLVKPEVLQVSFPEGEISVLPDEMTLDTDGKYNIRRIRSGKKSSDEFDRIEYTLLLEAAERRFGHGTRVEAVHLAGETQEQVTVTDRKKSARLSKAQSAMGAIAQGHFPAKPESRTCPRCPSFFICGKVPAGK 1138
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: A0A7G3FE59_9GAMM (DNA helicase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7G3FE59_9GAMM) HSP 1 Score: 275 bits (702), Expect = 4.860e-83 Identity = 132/171 (77.19%), Postives = 154/171 (90.06%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNVTAG 513
AQF QSW +RGPV+HGYA+DYRRIG+RLVQYL+ETRQGRQ+VKPE+LQ+SFPEG+I+VLPDEITLD DG +SIRRIK+G KGSDEFDR+EYTLL+EAAER FG GTRVEAVHLAGETQE V V++ KK+ RL K QSA+G+IA+G+FPAKPENRTCPR P+FFICG V G
Sbjct: 960 AQFTQSWNDRGPVNHGYADDYRRIGQRLVQYLMETRQGRQLVKPEILQLSFPEGDINVLPDEITLDIDGNHSIRRIKTGKKGSDEFDRMEYTLLVEAAERHFGKGTRVEAVHLAGETQEAVKVSDRKKNTRLDKAQSAMGSIARGHFPAKPENRTCPRCPNFFICGKVPPG 1130
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: UPI001118E3CA (UvrD-helicase domain-containing protein n=1 Tax=Aeromonas hydrophila TaxID=644 RepID=UPI001118E3CA) HSP 1 Score: 274 bits (701), Expect = 6.720e-83 Identity = 130/171 (76.02%), Postives = 154/171 (90.06%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNVTAG 513
AQF QSW +RGPVDHGY EDYRRIG+RLVQYL+ETRQGRQ+VKPEVLQ+SFPEG+I++LPDE+TLDT+G YSIRRIK+G KGSDEFDRIEY+LL+EA ER FG G+RVE VHLAGETQE VTV++ KK+ RL K QSA+G+IA+G+FPAKP+NRTCPR P+FFICG V +G
Sbjct: 960 AQFTQSWRSRGPVDHGYVEDYRRIGQRLVQYLMETRQGRQLVKPEVLQLSFPEGKINILPDEVTLDTNGNYSIRRIKTGKKGSDEFDRIEYSLLVEATERHFGLGSRVEVVHLAGETQEAVTVSDRKKATRLDKAQSAMGSIARGDFPAKPDNRTCPRCPNFFICGKVPSG 1130
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: UPI00067F3F7E (UvrD-helicase domain-containing protein n=1 Tax=Gallaecimonas pentaromativorans TaxID=584787 RepID=UPI00067F3F7E) HSP 1 Score: 268 bits (684), Expect = 1.650e-80 Identity = 128/169 (75.74%), Postives = 146/169 (86.39%), Query Frame = 1
Query: 7 FAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNVTAG 513
F SWLN+GPVDHGYA DYRRIG RLV YL+ETRQGR +VKPEVLQ+SFPEGEI+VLPDEIT+DTDG +S+RRIK+G KGSDEFDRIEY+LLLEAAER FG GTRVE +HLAGET E V+V+N KK+ RL QSA+G+I QG+FPAKP+NRTCPR PSFFICG V G
Sbjct: 962 FTMSWLNQGPVDHGYAADYRRIGRRLVDYLLETRQGRHLVKPEVLQLSFPEGEINVLPDEITVDTDGNHSVRRIKTGKKGSDEFDRIEYSLLLEAAERHFGPGTRVEVIHLAGETLEPVSVSNRKKNTRLGNAQSAMGSITQGHFPAKPDNRTCPRCPSFFICGTVPPG 1130
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: A0A4P7XGL9_9ALTE (DNA helicase n=1 Tax=Hydrocarboniclastica marina TaxID=2259620 RepID=A0A4P7XGL9_9ALTE) HSP 1 Score: 266 bits (680), Expect = 6.060e-80 Identity = 130/171 (76.02%), Postives = 148/171 (86.55%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNVTAG 513
AQF QSW RGPVDHGY +DYRRIG+RLVQYL+ETRQGR++VKPE LQVSFPEG+I VLPDE++ D DG +SIR IK+G KGSDEFDRIEYTLL+EAAER FGHGTRVEAVHLAGET E VTV++ K++ RL K QSALG+IA+G+FPA PENRTCPR PSFFICG V G
Sbjct: 961 AQFMQSWQIRGPVDHGYTDDYRRIGQRLVQYLMETRQGRKLVKPEALQVSFPEGKIIVLPDEVSCDIDGNHSIRCIKTGKKGSDEFDRIEYTLLVEAAERHFGHGTRVEAVHLAGETLEAVTVSDRKRTTRLDKAQSALGSIARGHFPAMPENRTCPRCPSFFICGKVPPG 1131
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: UPI0015811FC1 (UvrD-helicase domain-containing protein n=1 Tax=Halomonas titanicae TaxID=664683 RepID=UPI0015811FC1) HSP 1 Score: 262 bits (669), Expect = 2.130e-78 Identity = 127/171 (74.27%), Postives = 147/171 (85.96%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNVTAG 513
AQF QSW N GPVDHGY +DYR IG RLVQYL+ TRQGRQ+V+PE+LQ+SFPEGEI+VLPDEITL+ DG + IRR+K+G K SDEFDRIEYTLL+EAAER FG GTRVEAVHLAGETQE V V++ KK+ARL K +S +G+IAQG+FPAKP+NRTCPR PSFFICG V G
Sbjct: 963 AQFTQSWQNCGPVDHGYEDDYRCIGRRLVQYLMNTRQGRQLVQPEILQLSFPEGEINVLPDEITLNADGNHHIRRVKTGKKSSDEFDRIEYTLLVEAAERHFGPGTRVEAVHLAGETQEVVQVSDRKKNARLDKARSVMGSIAQGHFPAKPDNRTCPRCPSFFICGKVPPG 1133
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: UPI001A9547B0 (PD-(D/E)XK nuclease family protein n=1 Tax=Hafnia alvei TaxID=569 RepID=UPI001A9547B0) HSP 1 Score: 233 bits (593), Expect = 1.270e-73 Identity = 111/168 (66.07%), Postives = 139/168 (82.74%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNV 504
A+F +SWL GPVDH YA+DY RIG+RLVQYL+ETRQG ++VKPEVLQ+S+PEG I VLPDE+TL+ DG + +RRIK+G KGSDEFDRIEYTLLLEAA R +G RV+AVHLAGETQE VTV+ K+ ARL K Q+A+ +I++G FPA P++R CPR P+FF+CG +
Sbjct: 147 ARFRESWLKSGPVDHSYADDYLRIGQRLVQYLMETRQGLKLVKPEVLQLSYPEGTIIVLPDEVTLNKDGTHCVRRIKTGKKGSDEFDRIEYTLLLEAAGRHYGKDFRVQAVHLAGETQEIVTVSTRKQKARLDKAQTAITSISRGFFPANPDSRVCPRCPNFFVCGKI 314
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: UPI000BA8A72D (ATP-dependent helicase n=5 Tax=Enterobacterales TaxID=91347 RepID=UPI000BA8A72D) HSP 1 Score: 231 bits (590), Expect = 1.920e-67 Identity = 111/168 (66.07%), Postives = 139/168 (82.74%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNV 504
A+F +SWL GPVDH YA+DY RIG+RLVQYL+ETRQG ++VKPEVLQ+S+PEG I VLPDE+TL+ DG + +RRIK+G KGSDEFDRIEYTLLLEAA R +G RV+AVHLAGETQE VTV+ K+ ARL K Q+A+ +I++G FPA P++R CPR P+FF+CG +
Sbjct: 962 ARFRESWLKSGPVDHSYADDYLRIGQRLVQYLMETRQGLKLVKPEVLQLSYPEGTIIVLPDEVTLNKDGTHCVRRIKTGKKGSDEFDRIEYTLLLEAAGRHYGKDFRVQAVHLAGETQEIVTVSPRKQKARLDKAQTAITSISRGFFPATPDSRVCPRCPNFFVCGKI 1129
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: UPI0018F4D025 (UvrD-helicase domain-containing protein n=1 Tax=Pseudoalteromonas sp. bablab_jr004 TaxID=2755065 RepID=UPI0018F4D025) HSP 1 Score: 226 bits (576), Expect = 1.590e-65 Identity = 112/171 (65.50%), Postives = 132/171 (77.19%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNVTAG 513
AQF SW GPV+HGYA+DY RIG+RL+QYLIETR+ Q+VKPEVLQ+ F EG I+VLPDE+ +D G Y IRRIK+G KGSDEFDRIEY+LL+EAA R FG RVE VHLAGETQE V V++ KKS RL K ++A+ +I G FPAK E RTCPR P+FFICG V G
Sbjct: 960 AQFMSSWGKCGPVEHGYADDYLRIGQRLMQYLIETRKDGQLVKPEVLQLPFIEGTINVLPDEVIVDAKGNYCIRRIKTGKKGSDEFDRIEYSLLVEAARRHFGSSVRVEVVHLAGETQEPVIVSDRKKSVRLDKARTAMSSIIGGQFPAKAEGRTCPRCPNFFICGKVPGG 1130
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Match: UPI0011A948F0 (UvrD-helicase domain-containing protein n=2 Tax=Yersinia bercovieri TaxID=634 RepID=UPI0011A948F0) HSP 1 Score: 225 bits (574), Expect = 3.010e-65 Identity = 107/168 (63.69%), Postives = 138/168 (82.14%), Query Frame = 1
Query: 1 AQFAQSWLNRGPVDHGYAEDYRRIGERLVQYLIETRQGRQMVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEYTLLLEAAERQFGHGTRVEAVHLAGETQEQVTVTNLKKSARLSKTQSALGAIAQGNFPAKPENRTCPR*PSFFICGNV 504
A+F ++WL +GPVDH YA+DY RIG+RLVQYL+ETRQG +++KPE LQ+S+PEG I+VLPDEI L+ DG + IRRIK+G KGSDEFDRIEYTLLLEAAE +G +VEAVHLAGETQE VTV+ K+ RL K ++A+ +I++G FPA P++R CPR P+FF+CG +
Sbjct: 962 ARFKETWLRKGPVDHSYADDYLRIGQRLVQYLMETRQGLKLIKPEGLQLSYPEGTITVLPDEIILNEDGTHCIRRIKTGKKGSDEFDRIEYTLLLEAAESHYGKDFQVEAVHLAGETQEIVTVSARKQKTRLDKARTAITSISRGFFPASPDSRVCPRCPNFFVCGKI 1129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124612.5003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124612.5003.1 >prot_M-pyrifera_M_contig124612.5003.1 ID=prot_M-pyrifera_M_contig124612.5003.1|Name=mRNA_M-pyrifera_M_contig124612.5003.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp MVKPEVLQVSFPEGEISVLPDEITLDTDGKYSIRRIKSGIKGSDEFDRIEback to top mRNA from alignment at M-pyrifera_M_contig124612:1..516- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124612.5003.1 ID=mRNA_M-pyrifera_M_contig124612.5003.1|Name=mRNA_M-pyrifera_M_contig124612.5003.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig124612:1..516- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124612:1..516- >mRNA_M-pyrifera_M_contig124612.5003.1 ID=mRNA_M-pyrifera_M_contig124612.5003.1|Name=mRNA_M-pyrifera_M_contig124612.5003.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig124612:1..516- (Macrocystis pyrifera P11B4 male)back to top |