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Homology
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: D7G008_ECTSI (Sup35, eukaryotic translation termination factor eRF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G008_ECTSI) HSP 1 Score: 423 bits (1087), Expect = 6.330e-143 Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 1
Query: 1 VVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
VVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHF T+ KRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKW+KERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQV + C
Sbjct: 216 VVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTECKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWAKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVANDLC 434
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A6H5K4J4_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J4_9PHAE) HSP 1 Score: 414 bits (1064), Expect = 1.180e-141 Identity = 210/227 (92.51%), Postives = 214/227 (94.27%), Query Frame = 1
Query: 1 VVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKR--------YTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
VVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHF T+ KR YTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKW+KERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVK+QV + C
Sbjct: 216 VVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTECKRSVSAGPLAYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWAKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKKQVANDLC 442
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: B7FW70_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW70_PHATC) HSP 1 Score: 370 bits (950), Expect = 3.610e-125 Identity = 181/214 (84.58%), Postives = 196/214 (91.59%), Query Frame = 1
Query: 19 TDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPCS 660
T+ DPREHLNLVFIGHVDAGKSTLSGNILYLTD VDKRTIERYE+EAK+RNRESWFLAFIMDTNEEERAKGKTVEVG+A F TD KRYTILDAPGH YVPNMIQGA QADVG+LVISARKGEFETGFDRGGQTREHA+LAKTLGV YLVV +NKMD+PTV+W KERFDECVTKIRPFL+ CG+ +K+EVKFIPISGLSGANVK++V CS
Sbjct: 2 TEGDPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAQFETDLKRYTILDAPGHKNYVPNMIQGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVAVNKMDEPTVQWKKERFDECVTKIRPFLKS-CGFVIKREVKFIPISGLSGANVKDEVALSECS 214
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A835YYC4_9STRA (Sup35, eukaryotic translation termination factor eRF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC4_9STRA) HSP 1 Score: 374 bits (961), Expect = 2.680e-124 Identity = 182/214 (85.05%), Postives = 200/214 (93.46%), Query Frame = 1
Query: 16 ATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
A +EDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLA+IMDTNEEERAKGKTVEVGRAHF +D KR+TILDAPGHNAYVPNMIQGA QADVGILVISAR+GEFETGF++GGQTREHALLAKTLGVRYL+VVINKMDD TV WS+ERFDEC +K++PFLR CGYAVKK+V F+P+SGL+GANVK +V+ C
Sbjct: 195 AIEEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAYIMDTNEEERAKGKTVEVGRAHFHSDVKRFTILDAPGHNAYVPNMIQGAAQADVGILVISARRGEFETGFEKGGQTREHALLAKTLGVRYLIVVINKMDDHTVNWSRERFDECTSKLKPFLRS-CGYAVKKDVMFVPLSGLTGANVKVRVEPAVC 407
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A7R9WBC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WBC9_9STRA) HSP 1 Score: 367 bits (943), Expect = 3.400e-123 Identity = 179/210 (85.24%), Postives = 193/210 (91.90%), Query Frame = 1
Query: 28 DPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
DPREHLNLVFIGHVDAGKSTLSG+ILY+T VDKRTIERYEREAK+RNRESWFLAFIMDTNEEERAKGKTVEVGRAHF TD KRYTILDAPGH YVPNMI GA QAD+G+LVISARKGEFETGFDRGGQTREHALLAKTLGV YLVVVINKMDDPTV+W K RFDECVTK+RPFL+ CG+ +K+EVKFIPISGL+GANVK++V S C
Sbjct: 167 DPREHLNLVFIGHVDAGKSTLSGSILYITGNVDKRTIERYEREAKERNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDVKRYTILDAPGHKNYVPNMIMGACQADIGVLVISARKGEFETGFDRGGQTREHALLAKTLGVSYLVVVINKMDDPTVEWKKARFDECVTKLRPFLKS-CGFVIKREVKFIPISGLTGANVKDEVDSSVC 375
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A1E7EUD7_9STRA (GTP_EFTU-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUD7_9STRA) HSP 1 Score: 365 bits (936), Expect = 6.370e-123 Identity = 176/211 (83.41%), Postives = 193/211 (91.47%), Query Frame = 1
Query: 28 DPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPCS 660
DPREHLNLVFIGHVDAGKSTLSG+ILY+ D+VDKRTIERYE+EAK+RNRESWFLAFIMDTNEEERAKGKTVEVG+AHF T+ KRYTILDAPGH YVPNMI GA QADVG+LVISARKGEFETGFDRGGQTREHA+LAKTLGV YLVVV+NKMDDPTV WSKERFDECV K+RPFL+ CGY +K EVKFIP+SGL G+NVK++V S CS
Sbjct: 15 DPREHLNLVFIGHVDAGKSTLSGSILYILDYVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAHFETEAKRYTILDAPGHKNYVPNMIMGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVVVNKMDDPTVNWSKERFDECVKKLRPFLKG-CGYTIKTEVKFIPVSGLVGSNVKDEVDSSICS 224
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A7S1ZIV8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIV8_TRICV) HSP 1 Score: 368 bits (945), Expect = 3.380e-122 Identity = 179/210 (85.24%), Postives = 192/210 (91.43%), Query Frame = 1
Query: 28 DPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
DPREHLNLVFIGHVDAGKSTLSGNILY+TD VDKRTIERYEREAK+ NRESWFLAFIMDTNEEERAKGKTVEVGRAHF T+ KRYTILDAPGH YVPNMI GA QADVG+LVISARKGEFETGFDRGGQTREHALLAKTLGV YL+VVINKMDDPTVKW K RFDECVTK+RPFL+ CG+ +K+EVKFIPISGL+GAN+KE+V C
Sbjct: 172 DPREHLNLVFIGHVDAGKSTLSGNILYITDNVDKRTIERYEREAKELNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETEDKRYTILDAPGHKNYVPNMIMGASQADVGVLVISARKGEFETGFDRGGQTREHALLAKTLGVSYLIVVINKMDDPTVKWQKSRFDECVTKLRPFLKS-CGFVIKREVKFIPISGLTGANIKEEVDPKVC 380
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A6V2PLH0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PLH0_9STRA) HSP 1 Score: 367 bits (943), Expect = 4.270e-122 Identity = 178/215 (82.79%), Postives = 196/215 (91.16%), Query Frame = 1
Query: 13 EATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
+A + DPREHLNLVFIGHVDAGKSTLSGNILY+T+ VDKRTIERYEREAK+RNRESWFLAFIMDTNEEERAKGKTVEVGRAHF T+ KRYTILDAPGH YVPNMI GA QAD+G+LVISARKGEFETGFDRGGQTREHALLAKTLGV YLVVVINKMDDPTV+W K+RFDECVTK+RPFL+ CG+ +K+EVKFIPISGL+GAN+K+ V C
Sbjct: 151 DAPEGDPREHLNLVFIGHVDAGKSTLSGNILYITENVDKRTIERYEREAKERNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETEVKRYTILDAPGHKNYVPNMIMGASQADIGVLVISARKGEFETGFDRGGQTREHALLAKTLGVSYLVVVINKMDDPTVQWDKQRFDECVTKLRPFLKS-CGFVIKREVKFIPISGLTGANIKDTVSPSVC 364
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A8J2S3Z0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3Z0_9STRA) HSP 1 Score: 361 bits (927), Expect = 3.550e-120 Identity = 175/215 (81.40%), Postives = 196/215 (91.16%), Query Frame = 1
Query: 13 EATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
E +EDPREHLN+VFIGHVDAGKSTLSGNILYLT +VDKRTIE+YEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRA F T+ KRYTILDAPGH YVP+MI GA QADVGILVISAR+GEFETGF+RGGQTREHA+L KTLGVR+L+VVINKMDDPTVKW +ERFDECV+K++PFL+ CGY +KKEV+FIPISGL+GANV ++V S C
Sbjct: 111 EVQEEDPREHLNVVFIGHVDAGKSTLSGNILYLTGYVDKRTIEKYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAPFETEAKRYTILDAPGHKNYVPHMISGAAQADVGILVISARRGEFETGFERGGQTREHAMLCKTLGVRFLIVVINKMDDPTVKWQRERFDECVSKLKPFLKT-CGYIIKKEVRFIPISGLTGANVLKEVDSKAC 324
BLAST of mRNA_M-pyrifera_M_contig12458.4993.1 vs. uniprot
Match: A0A448ZSH7_9STRA (Tr-type G domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSH7_9STRA) HSP 1 Score: 362 bits (928), Expect = 7.350e-120 Identity = 180/220 (81.82%), Postives = 197/220 (89.55%), Query Frame = 1
Query: 1 VVEKEATDE-DPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVKSGPC 657
VVE E E DPREHLNLVFIGHVDAGKSTLSG+ILY+T+ VDKRTIERYEREAK+ NRESWFLAFIMDTNEEERAKGKTVEVG+AHF TD KRYTILDAPGH YVPNMI GA QAD+G+LVISARKGEFETGFDRGGQTREHA+LAKTLGV YLVVVINKMDDPTV+W+KER+DECV KIRPFL+ CG+ +K+EVKFIPISGL GANVK++V C
Sbjct: 145 VVEVEPVKEGDPREHLNLVFIGHVDAGKSTLSGSILYITENVDKRTIERYEREAKELNRESWFLAFIMDTNEEERAKGKTVEVGKAHFETDVKRYTILDAPGHKNYVPNMIMGASQADIGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVVINKMDDPTVQWAKERYDECVQKIRPFLKG-CGFVIKREVKFIPISGLKGANVKDEVDPSVC 363
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 423.3 |
| Seed ortholog evalue | 6.9e-116 |
| Seed eggNOG ortholog | 2880.D7G008 |
| Preferred name | SUP35 |
| KEGG ko | ko:K03267 |
| KEGG Pathway | ko03015,map03015 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000166,GO:0000287,GO:0000288,GO:0000956,GO:0001882,GO:0001883,GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003747,GO:0003824,GO:0003924,GO:0005085,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006415,GO:0006464,GO:0006479,GO:0006518,GO:0006725,GO:0006807,GO:0008022,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0008213,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0018444,GO:0019001,GO:0019003,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0022411,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0034655,GO:0035639,GO:0035770,GO:0036094,GO:0036211,GO:0036464,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0046872,GO:0048519,GO:0050789,GO:0051020,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 |
| EggNOG free text desc. | regulation of response to stimulus |
| EggNOG OGs | COG5256@1,KOG0459@2759 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03012,ko03019 |
| Exons | 6 |
| Model size | 663 |
| Cds size | 663 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815762.9761295-CDS-M-pyrifera_M_contig12458:614..681 | 1622815762.9761295-CDS-M-pyrifera_M_contig12458:614..681 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 615..681 + |
| 1692277557.98031-CDS-M-pyrifera_M_contig12458:614..681 | 1692277557.98031-CDS-M-pyrifera_M_contig12458:614..681 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 615..681 + |
| 1622815762.993824-CDS-M-pyrifera_M_contig12458:1869..1945 | 1622815762.993824-CDS-M-pyrifera_M_contig12458:1869..1945 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 1870..1945 + |
| 1692277557.995845-CDS-M-pyrifera_M_contig12458:1869..1945 | 1692277557.995845-CDS-M-pyrifera_M_contig12458:1869..1945 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 1870..1945 + |
| 1622815763.0084116-CDS-M-pyrifera_M_contig12458:3994..4129 | 1622815763.0084116-CDS-M-pyrifera_M_contig12458:3994..4129 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 3995..4129 + |
| 1692277558.0067792-CDS-M-pyrifera_M_contig12458:3994..4129 | 1692277558.0067792-CDS-M-pyrifera_M_contig12458:3994..4129 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 3995..4129 + |
| 1622815763.0209455-CDS-M-pyrifera_M_contig12458:5926..5981 | 1622815763.0209455-CDS-M-pyrifera_M_contig12458:5926..5981 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 5927..5981 + |
| 1692277558.0190127-CDS-M-pyrifera_M_contig12458:5926..5981 | 1692277558.0190127-CDS-M-pyrifera_M_contig12458:5926..5981 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 5927..5981 + |
| 1622815763.033297-CDS-M-pyrifera_M_contig12458:7166..7291 | 1622815763.033297-CDS-M-pyrifera_M_contig12458:7166..7291 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 7167..7291 + |
| 1692277558.0387993-CDS-M-pyrifera_M_contig12458:7166..7291 | 1692277558.0387993-CDS-M-pyrifera_M_contig12458:7166..7291 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 7167..7291 + |
| 1622815763.0440836-CDS-M-pyrifera_M_contig12458:8671..8876 | 1622815763.0440836-CDS-M-pyrifera_M_contig12458:8671..8876 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 8672..8876 + |
| 1692277558.050673-CDS-M-pyrifera_M_contig12458:8671..8876 | 1692277558.050673-CDS-M-pyrifera_M_contig12458:8671..8876 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig12458 8672..8876 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12458.4993.1 >prot_M-pyrifera_M_contig12458.4993.1 ID=prot_M-pyrifera_M_contig12458.4993.1|Name=mRNA_M-pyrifera_M_contig12458.4993.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
VVEKEATDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYE REAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFATDHKRYTILDAP GHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTL GVRYLVVVINKMDDPTVKWSKERFDECVTKIRPFLRQQCGYAVKKEVKFI PISGLSGANVKEQVKSGPCS* back to topmRNA from alignment at M-pyrifera_M_contig12458:615..8876+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig12458.4993.1 ID=mRNA_M-pyrifera_M_contig12458.4993.1|Name=mRNA_M-pyrifera_M_contig12458.4993.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8262bp|location=Sequence derived from alignment at M-pyrifera_M_contig12458:615..8876+ (Macrocystis pyrifera P11B4 male) GTGGTCGAGAAAGAGGCCACCGATGAAGACCCAAGGGAGCACCTCAACCT
CGTGTTTATTGGGCACGGTAAGACCGTACACCCATTGGGGTAGCACTTTT
TTGGCAAGAATGTTTCACTGGAACTGGCCGGTCTCCTCAATCCAATTCCG
TCGGAACTTGCATCAGTATTTTACTCTTACTCGAGACATACCTACTATTT
AGTAGTCGCGTTGCGCTATTTTTGCTTTTCTCAACAATCAGTTTCTGGAT
GAGGTGTGGAGGTCCTATTCTGTAGAGCTATCCCGGTAAGGCAAACTCTG
GTGCTACCCCTGCCCCTACTGTACATATCAGGCAAACCCTGCCTTAGCGT
GCGTCACGTGAGACCCGCCTGCCTTCCTTCCCCGGTGCCAAAGCCTGTGC
GAGCCTTCGCATTATGCCGCTATCTCGACCCGTCGGCATGCAGCACACCC
GCTGTCCGCGCTGATTCCTTTGTCGTGGTAAGAGAGGCACAAGCTCTGTG
GTCGCAAACCTAACCGCCAGGTAAGAGACGGTACTATACGTTGGGCTGCA
GTGGAGAGAGTGTGCAGATCCATTGCCATGCCGTCGTACTGGATACGACG
GGAAACCGTCATTGTTCTCGGCGACCATCACCCATGTCGTCCACTATGCC
CTCGCTTGTAGCGCCCCCTGCGGCATCATTCCCTGTGCCGCCCTCTTTGC
CTCGTCACCTACAGGACGTCGCCTATGCCATGCCCTCTGTGACCCGTCTT
GATATCCCCTGCACAGGCCTCCTATGTGCCATGCACAGCCTTAAGACGTT
CCCCTCGTCTCATCCCCGACGTTTTCCCATACGCGGCGGCCCCCTGTCTC
GTGCACGTATCGACCTATATTACCTCTGTTCTTGGGGATTGTGAGACCAA
TCATACAGATCATTCAGATCGTTCCCGAGTCATGATCTAGATCCCTCAGG
GAAGATTGATCCCTTATGGGTATGATCTAGCTCTTGCGGGAGCCGTATGA
TGTGCTTCATAATCTAGCACACTTTTCATGGTGTGGGCCTGTACTTTGCA
GTTACTGCCCCAACATCTCGAAGCGAGGCTAGGATCTCAGATGATGTATC
TGGATGAGCTATCTGTGGATGATCTGTCGGACGGGTGGATTGTGTCGATC
CCTTTAGCTCTGCTCTGCTTGCACTTATTTCTTTCACTCCACCTCCTCCG
CCGCATCCGCGGTGTGTTTATGTGTCTTGGTTATGTTTGTATGTTTTTGT
GCCAGTCGACGCGGGGAAGTCGACACTTTCAGGAAACATCCTCTACCTCA
CGGACTTCGTCGACAAGCGCACGATCGAAAGGTGAGCCACCCGACGAACG
ATCGGTCAGACAAACGATCTGTCTGTTGGAACATCAGTCGAGCAGATGAG
CGCTCAGTTTGCGCCCGATCAGGCGAGCGGTCAGTACGTTGGAATGTCGG
GTCGGTCAGACGATCTGTTGATTCAAGACGAACGGTCGGGCGGTTGGAGA
ACGATCGGTAAGGCGTCAAATGTTTTTTGCTGAGACGGGAGGTCGGCCAG
GCAAACGGTCAGTCAGCTGGACCAATGGTCGAATGGACGAACGATCGGTA
CGGCGACACACGGTCAAACGAACGATCGGTGAGGCAAACGATCAGTCAAA
GTCAGTAATGCGATCAGAAGTCAATCAGACCACAGGTCGGTCTGACGCAT
GATCGGTCTGTTCAGCAGATCAGTCAGACGAACGGTCAGCCAGTTGGACA
ACCGGTCAGTAGTGCGATAAGTGGTCGGTCAGACCAAGGGTCGGTCTGAC
GCACGGCCAGTCTCTCAAGCAGGTCAGTCACATGAACGTTCGGTCAACTG
GACAAGCGGCCAGCACGGCGATAGATGATCGGTCAGACCACGGGTCGGAT
TGACGATTCATTGGTCAGACGAACCGTCAGTGAGACGGTCGGTCAGACAA
ACAGATTCATAGACAGACGAACGAACGATGCACGTGCTGGTGTCAATTGA
CATATCCCGGTATGTTTATGATCCAGCAGACTAAAATAGCTCTGCTGCAA
AGCCGCTCAGGCTGTGAATGTGTGCAAATGATCCGGCTCCAGGCGAGTCT
CTTGTGTGGGTTGTATAGCGGGGGGAACCGTGCGGCAGGGCAACTTTGCG
CTGCTGCCATTGCTCTTTTTTTGTTTTCCGCCATTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCATCGGGTGATGTTGCTGTTGCTTAATTTTTGTTTTT
ACACAGCTGTGATCGTGTGTTGGACGCCGCCGCTGTCTTTTGGGTGGGCT
GTTTGGTCCGGTCTTGGTTTCCCGCAGTACCGAAAACACCACTTGGGCGT
GGATGCTGAGTTTCTTGTTGTTTTCTTTGTTGTGTTGTTGTGTGCTTACA
TTGTCGTGCAAGTTCTCTCGGTATTGACGGTTTTGTTGCAGCTGCTGTAG
TTGCCGCTCCCGATGTTACTGCGAGAAACATCGAGGTCTGCGTAGACCTG
CAGATACAGCCCCAGCTTCGACGAAAATGATTGAAATGCGCTTGACTTTC
AAACACTACTCTAACCCCGGACGCTTTGGGACAACTCTCGGGATGTTCCA
GGATGTAATGAAGAGATAGTGCGGACGGACTATCAACCAGTTTGTTGGAA
TACGATGTATCGGCGGACTGTCGACCTTTTTGTCGAAATAAAGTATGATA
AGATACCAGCAAGAGTTGTGCAGACTATCAACCTTTTTGTCGAAATGAGA
CGTGAACAGGAGTTAGTGCGGAATATCAACCATTTTGTCCAAACGAGATG
TAGCGAAGAGTTAGTACGGACTATCAACCATTTGTACGAAATGAGATGCA
ATGAAGAGGTATTAGAGCCCATCTTAACGGGGAACACTAAATTTCGTTCC
AATCAGATGGAAGTTAAATTAGAAAAAAAAAATCAAGTCAAATTGAAAGA
ACCGAAAGTCCTCGACAAGATGGGCCCTTGATAGTGCGGAATATCAACCA
TTTTGTCGAAATGAGATGTAGCGAAGAGTTAGTGCGGAGTATCAACCATT
ATTACGAAATGAGATGCAATGAAGAGGTATTAATAGTGCGGAATGTCGAT
CATTTTATCGAAATGAGATGTAGCGAAGAGTTAGTGCGGACTATCAACCT
TTTTTTTTTACGAAATGAGATGCAACGAAGAAGTAAATAATAGTGCGGAA
TGTCAACCATTTTGTCGAAGTGTTGATGTAGTGAAGAGGTTGTGTGCACT
ATCAACCATTGCTATGAACATGGTGTGAAGAAACAGTGTGGACCAACAAC
CGTTCCAAGTCGTACGTATACACTGATGTCGTATTGTTGCGCTGCTGTTC
GACTTGGTCGTGTTGGACACCATGTTACAGGTACGAGCGGGAGGCCAAAC
AGCGCAACCGCGAGTCGTGGTTCTTGGCCTTCATCATGGACACCAACGAG
GAGGAGCGGGCCAAGGGGAAGACCGTGGAAGTCGGACGGGCTCATTTTGC
GACGGACCACAAGAGGTGACAGATCGGACAGCCCATGATCCAGATCGTGA
TCTTGATCTACAGCAGATCATTTGGATCCTATGCAGAACATGACCTTGAT
GCGAATCTTCTGGATCCTATACATTTTTGCCGTTATGATATGTTGTATAT
ATCGCAACACAAAAGGTGGCACGTGTCACAGATCATGATCTAGATCATGA
TCTTGATCTGATACGCGGGGACATAGCAATCAGCACCAGATACAGACTTT
TTCGGCAGACTTTTTCGGTCCCTCATGGGCTCTGATTACTACTAATAGTA
TTACGGGAGACCATAGTAAACAGGACCTACGGTACACACAAAAACCTGTA
TATTTCCCATGTTCACCAGCAATTTTTGGTCCTATTTACTACGGCCCCCC
GTAGATAATCTAAATGGTCTGGATTCGCTGCCGTTGTGAGGTGCTCGGCT
CAAGCCAAGACCAAGGACTCGTCGTATTACGGGGGGCCATAGTAAATGGG
ACCAAATTTTGTTAGTAAAAATAGGAAAATATATAGGTTTCTTTGTGTAC
CGTACGTGTTATTTACAAAGGTCCTCCGTAATGGTGAGCAGTCTTTTACT
GTATATTTACCACGAGTGCTTGCCCCTAGTTGTGGTCGAAATCTCGGTAT
GATGTAGGTCATTGTCAAAGGCAAAAGTAGAGACCGGCCTGTGGTTTTCC
CCTTGATCGGGATTTTTTTTATGTTGTGCCACGGATCACGTAAGGTGACC
ACATCTGACAGACGGAACAGATCACGATCAAGATCATGAGCTAGATCGTG
GCCACGTCTGCCGGATGGGACAGATGACGATGTAGACCATCTAGACCCTT
CGCTTGTCGGTGTGGTGTTTTGTGCCACGGAGCCCGAGAGGTGATTGTCG
TTGCGCATACATGAGACAGATCGCGATGCAGTGTGTAGATCATGGAGGAC
CCTGTAGTTGGCCTCAAGACATGGCGTCGCCACGGACGGTGAGATGTGCT
TGATAAGAGACCAGTCGCGATTGAGGTCATCTAGACCGCCGCGGAGCACA
AGAGGCGCACTGGCTTGCACGCATCGACGAGGTCGCGACCTACGTGTACT
AGATCGTCCGGATCCTAAATTTTCGGTCATGAGAGATATAACTTTGCTGC
GGAGGGAGTACAGAGAGGTGATCGATGGACATGTGGGATCACCGCACATG
ATGGGACAGGCGGATTGCGCAGCTCGTAGAGGTCCAACACTTATTCGAGC
AAATGGTTGGCACATACGCTGTACGAGACGAAGGAGCTGATGCTAAGTGT
ATATATAGCCAATGGTTGATCGGCTTGAGGGTTGCGGTTAGGATTCGTTA
TGTTCGCCTCGCACACGGTGGCCCTCTCACCGTTTTCTCGAATGGGTGGA
AAGCTACCCGGTACGATGCGGATCACCTATAGGCCCTATAGTTGCCGTTG
CGAGATGCCGTTCAAGCTCTTGCTTGCTTTCCTGCCCGCCTGAACTAAAC
CGCTCTGGTAACCGCTGCCTTGCCCCAGTGCCGCCTCTCGCGACGTCGCT
ACTTGATATACCTGGTACCTGGCACGCGCTGAGTTATTTTCATGGGTGCT
TTCTGAGCTTGCTGGGTGGCCGTTTTTGTAACCGTTTTGTCATCCGTTTC
TTGTCACCGTTTTAGCAACCGTAATGATGGGATTGATTTTTTTCCATTTC
TGTAGCTGTTTTTGCAACGGTTACTTGTGCTGACAATGCTTTTGCAACAT
TTGTGCAACAGTTTTTGTAACTGTCATGTTAACTTTTTTTTGTTTTTGTC
CTCGCTGTGAAGGTACACGATCCTCGACGCTCCCGGTCACAACGCCTACG
TACCCAACATGATTCAGGTGAGTGTTTTTGTTTGTTTAGCAATCATGCTT
GGGAGCCCTCGGTTTGTGACCCATCGACTGCCAACAGAGGCGTTGGCCTC
TGCCCAAAAGACCGTTGGCGAGCCCAAATGACCATTGGCGTGCCCAAAAG
ACCTGTCTCCGTTCTATTTGAATATATGTCTGGTATCGTTTACCGAGGTA
CCAGGTATGTGATCAGTGTTTGCATTAAAAAAAAAATGTTGGTTTTAGTA
TTTTACCTCCGCCTTATAACCCGTTTACTACCGCAATCCCGTTTTGGGGA
TGAACTACTGATAATTTGAGTGGTTTGCCCCCCCCCCATGGGCTATTACC
AGGAACATAACGATCAGGACCAAATATCCTTATTAACAGTACAAATACTG
TAATATACCAGATATAGGTTTTTGTGTATTTGATGGGTCCTGATTACTGT
GGGCACCCGTGTTAATAGTAATAGTTGCTGTAGTATTACCGGGGACCATA
TTAAGTAGGCACTACGGTACACAAAAAAAACTATATATTTCGCTATTTTT
ACTGACAATATTCGGTCCTATGTACTATGGTCCCCCGTAATAGTAGTAGT
AGTAGGCCTATATGGTAGGACCCAAGGACCCCGTCACAGCGCTATTAATA
AGACACGAGGAGAAAGCCAACAAGAACAACTACCCTCCCATTGAACATAT
GTGTAGCACGAGCTGCGCAGCGCGATTTACCGTAAAAATTACGCCGTCGG
TGCCTAACTCCCGGCCGATAACGTTCCGTGTCACGTCGCGTGGATCAGAC
TCCCGCTTGTTGTCTGTGGCCACGTTTCTCAGATTATTGTTGGTAGAATA
GGGCCCACCCCCCCCCTCTCTCTCCCCCCTGAGGAACGCGGACAGATGTG
GTATGGATAAGTTTGGTACAGTCGACAACAGCAAAAAGAGAATCATTTAT
CGGTGATAAGGAAAGCTGAGCAAGAAGGGGATACCAGGTATATATGTAAG
GGGATCATTTTTGTTGTTGAATCAAGTACGTGGGGAAAACGTAATGAGCC
GCCTAAATGAATGTTGGAGGTGTCTCTAATAGGAGTAGGAGCGTTGCTCC
GTCTCGAAAGGTATGCGTGCTCAATGGTCAAAGAGCTAAGGCAATCAACA
AATGAGTACGACCCCCTCTTCCCCCTCCCCTCACGCGTCCGTCTTTCGCC
AGGGTGCGGTGCAAGCGGATGTGGGCATCCTCGTCATTTCTGCGCGAAAG
GGAGAGTTCGAAACCGGCTTTGACAGGGGGGGGCAGACGAGGGAGCACGC
GCTTTTGGCCAAGACGCTAGGGGTTAGGTGAGGAGGCGTTATTTTGAAGG
ACTACAGGGGATGTTTACGTGCAGGCTTGAATCAATGCCTCGGACCGATC
GTGATCTGTAGGTTGTGTAGTTCCTCACCTTTCCGTTGTGAGAGGTTTCT
GGGTGACTTGGTATGGACTTAATATCAAGAATGGGAATGCCTTGTTAATA
GAATGAATGAGTTATGAATAGGAATGCCTTGTTACCAGGAACGACTTAAA
ACTTGTTTGACTCATCGATAGGAACGACTTATGAACAAGAATGGCTCATC
AATCAATAAGAATGGCTTGATAATAGGAATGACTTGCTCATTACGGGGGA
CCGTAATAAATACCAGTAGGACCTACGGTACACACAAAAACCTAAATTTT
TCCCTGTTTTTGCTAGCCCTAACCTTATCCCTGTTTACTGTGCCCTCCCG
TAAAAATAAAAATGACTCATTTAATGAGTCATTCAATAAGAATGACTTAT
TAATAGGAATGGCTGGGTATTAGTATAGACCTCTTCAAGCGAACAGCCGC
TCTGATCGTAAATGTAAGGGACGCTTCGTTTCGATGTTGGCGCGGAAACG
ATCCTTGTAGTCCCTCCCAGCGTGGTAGGTGCTTCAGTCAGTCCACGCCC
CTCTCTCTGCCCGCAGCATGGGCGCAAACCTGCTTGTTTTCGTCATACGC
GGGAGAGCACCCTAGCGATATGTACAGCACAGAAGGGTTTATTGGTTAGG
GTTTTTAGGGCGTATCACTCCGGGTCTACAAGGCCCCTGTGTTTGTGGTA
CTACTTACTGTATACTAATTATCATGGGTCAAACCCTGTGGGGTGTCTGG
GTACGCCCAAAGCTGGTTGCTTTCGCAATAGTCGGGAGGGTACGGTACCC
TATTGATGGCGAGTATATACAGAAGCGTTCCTACAGACAGTAGGCTGTGT
TTATGGTGGGGTGTACCAGCATGTATTGCTGCTGCCGTCGCCGCTGCGGC
CCGCGACGAAGTGCGGTTATCGCGCCCCGCGTTGACACCGGACTGCACCT
GTACCGACGTGTCGCATGCTAAAGAGATACGCCATAACCCACCCCATTTA
GGGCCGCACTACCGTTTTGGAGACAAACCACTGATTAAGGGGGACCATAG
TAAATAGGACCAAATATCGTTGGTAAAAATACAGCAGGCAAATGTATAGG
TTTTTGTGTATACCGTAGGTCCCATATCTACTAGGGTCCCCCGCAGTAAT
CGGAATTACAGTCGGATTTAAGTTTATGTACGGAGTAGTGAAGAGGTTTT
AACCGCCGTGCCGCGCCCTCCATCCCTCCCTCCCTCCCTCCCGCCGCCCC
CCCCCTCCCTCCCCCATCCCCCCCCCCATCCCTCCCGCCCTCTATAACTT
CCCCAAGGTACCTGGTGGTGGTAATCAACAAGATGGACGACCCAACTGTC
AAATGGTCGAAGGAGCGGTTCGATGAGTGCGTCACCAAGATCCGACCGTT
CTTGCGGCAGCAGTGCGGGTACGCGGTGAAGAAGGAAGTCAAGTTCATCC
CCATTTCGGGGCTGTCGGGGGCTAACGTGAAGGAACAGGTGAAGAGCGGG
CCCTGTTCGTAG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig12458:615..8876+ >mRNA_M-pyrifera_M_contig12458.4993.1 ID=mRNA_M-pyrifera_M_contig12458.4993.1|Name=mRNA_M-pyrifera_M_contig12458.4993.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig12458:615..8876+ (Macrocystis pyrifera P11B4 male) GTGGTCGAGAAAGAGGCCACCGATGAAGACCCAAGGGAGCACCTCAACCT CGTGTTTATTGGGCACGGTGGTCGAGAAAGAGGCCACCGATGAAGACCCA AGGGAGCACCTCAACCTCGTGTTTATTGGGCACGTCGACGCGGGGAAGTC GACACTTTCAGGAAACATCCTCTACCTCACGGACTTCGTCGACAAGCGCA CGATCGAAAGTCGACGCGGGGAAGTCGACACTTTCAGGAAACATCCTCTA CCTCACGGACTTCGTCGACAAGCGCACGATCGAAAGGTACGAGCGGGAGG CCAAACAGCGCAACCGCGAGTCGTGGTTCTTGGCCTTCATCATGGACACC AACGAGGAGGAGCGGGCCAAGGGGAAGACCGTGGAAGTCGGACGGGCTCA TTTTGCGACGGACCACAAGAGGTACGAGCGGGAGGCCAAACAGCGCAACC GCGAGTCGTGGTTCTTGGCCTTCATCATGGACACCAACGAGGAGGAGCGG GCCAAGGGGAAGACCGTGGAAGTCGGACGGGCTCATTTTGCGACGGACCA CAAGAGGTACACGATCCTCGACGCTCCCGGTCACAACGCCTACGTACCCA ACATGATTCAGGTACACGATCCTCGACGCTCCCGGTCACAACGCCTACGT ACCCAACATGATTCAGGGTGCGGTGCAAGCGGATGTGGGCATCCTCGTCA TTTCTGCGCGAAAGGGAGAGTTCGAAACCGGCTTTGACAGGGGGGGGCAG ACGAGGGAGCACGCGCTTTTGGCCAAGACGCTAGGGGTTAGGGTGCGGTG CAAGCGGATGTGGGCATCCTCGTCATTTCTGCGCGAAAGGGAGAGTTCGA AACCGGCTTTGACAGGGGGGGGCAGACGAGGGAGCACGCGCTTTTGGCCA AGACGCTAGGGGTTAGGTACCTGGTGGTGGTAATCAACAAGATGGACGAC CCAACTGTCAAATGGTCGAAGGAGCGGTTCGATGAGTGCGTCACCAAGAT CCGACCGTTCTTGCGGCAGCAGTGCGGGTACGCGGTGAAGAAGGAAGTCA AGTTCATCCCCATTTCGGGGCTGTCGGGGGCTAACGTGAAGGAACAGGTG AAGAGCGGGCCCTGTTCGTAGGTACCTGGTGGTGGTAATCAACAAGATGG ACGACCCAACTGTCAAATGGTCGAAGGAGCGGTTCGATGAGTGCGTCACC AAGATCCGACCGTTCTTGCGGCAGCAGTGCGGGTACGCGGTGAAGAAGGA AGTCAAGTTCATCCCCATTTCGGGGCTGTCGGGGGCTAACGTGAAGGAAC AGGTGAAGAGCGGGCCCTGTTCGTAG back to top
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