mRNA_M-pyrifera_M_contig124479.4983.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A6I6ACA8_9PLAN (Phage major capsid protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ACA8_9PLAN) HSP 1 Score: 330 bits (845), Expect = 1.750e-110 Identity = 166/168 (98.81%), Postives = 168/168 (100.00%), Query Frame = 1
Query: 1 SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRS 504
SSARVT+PKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATR+
Sbjct: 257 SSARVTVPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRA 424
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A517VP98_9PLAN (Phage capsid family protein n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VP98_9PLAN) HSP 1 Score: 310 bits (794), Expect = 8.980e-103 Identity = 153/168 (91.07%), Postives = 165/168 (98.21%), Query Frame = 1
Query: 1 SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRS 504
S+ARVT+PKE+GQAAN+IVAEN+L+MWSR++ASSR N+AWFINQDTEPQLHQMSLGVSTAGGQLVYMPP+GLS A YATLMGRPVIPTEFNETLGTEGDI+LASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATR+
Sbjct: 256 SAARVTVPKEAGQAANTIVAENVLNMWSRLKASSRLNAAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPTGLSGAPYATLMGRPVIPTEFNETLGTEGDILLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRA 423
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A6C3V3_9PLAN (Possible phage phi-C31 gp36-like protein / Major capsid protein, HK97 family n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6C3V3_9PLAN) HSP 1 Score: 308 bits (789), Expect = 5.290e-102 Identity = 155/168 (92.26%), Postives = 163/168 (97.02%), Query Frame = 1
Query: 1 SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRS 504
SSARVT+ KESGQAAN+I+AENIL MWSR++ASSR NSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPP+GLS ASYATLMGRPVIPTEFNETLGTEGDI+LASLDDYITISKG IEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATR+
Sbjct: 257 SSARVTVSKESGQAANTILAENILQMWSRLKASSRMNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPAGLSGASYATLMGRPVIPTEFNETLGTEGDILLASLDDYITISKGCIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRA 424
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A6C2YGP1_9BACT (Uncharacterized protein n=1 Tax=Tuwongella immobilis TaxID=692036 RepID=A0A6C2YGP1_9BACT) HSP 1 Score: 198 bits (503), Expect = 1.230e-58 Identity = 97/166 (58.43%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 7 ARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRS 504
A +T+PKESGQAA +I EN+L MWSR+ A R N+ WF NQD EPQL M + V + GGQ VY+PP GLSE YATLMGRP++P E+ TLGT GD++LA L Y+TIS+G +E A SMH+ F D+ A R I R+DG+PW PLTPY+GT TQS FVTL R+
Sbjct: 290 ATITVPKESGQAAATITTENVLKMWSRLYAPCRPNAVWFHNQDIEPQLWAMRMNVGS-GGQPVYLPPGGLSERPYATLMGRPLMPVEWCSTLGTAGDLILADLSQYVTISRGAVESAMSMHLRFDYDETAFRLIFRMDGQPWWAAPLTPYQGTQTQSCFVTLQNRA 454
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A6N8BXL4_9CLOT (Phage major capsid protein n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A6N8BXL4_9CLOT) HSP 1 Score: 188 bits (478), Expect = 3.670e-55 Identity = 89/164 (54.27%), Postives = 117/164 (71.34%), Query Frame = 1
Query: 10 RVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATR 501
+VT+P E GQA +I+AENI MWSRM A +N+ W++NQDT PQL+ +S V T GG +Y+PP GLS+ Y TL GRPV+P ++ TLGTEGDI+L Y+ KGG++ S+HV FLTD++A RF+ R+DGK W+ PLTPY+GT T S FVTLA+R
Sbjct: 267 KVTVPIEKGQATKTILAENIHKMWSRMDAEYWENATWYVNQDTMPQLNTLSQVVGT-GGVPIYLPPGGLSQKPYGTLYGRPVVPVKYCSTLGTEGDIVLGDFSQYVLCDKGGVQAQSSLHVYFLTDEMAFRFVYRVDGKTWQPTPLTPYQGTNTVSPFVTLASR 429
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: UPI002022F95C (phage major capsid protein n=1 Tax=Xanthobacter aminoxidans TaxID=186280 RepID=UPI002022F95C) HSP 1 Score: 189 bits (479), Expect = 6.040e-55 Identity = 92/165 (55.76%), Postives = 118/165 (71.52%), Query Frame = 1
Query: 7 ARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATR 501
A+VT+ KE+GQAA +IV +NIL+MWSRM SR N+ W+INQD EPQL+ +S + TAG VY+PP+G+S Y L GRPVIP E+ ETLGTEGDI L + Y+ KGG++ A SMHV FLTD++ R R+DG+P PL P+KGT TQS F+TLA+R
Sbjct: 304 AKVTVDKETGQAAKTIVYDNILNMWSRMWGRSRSNAVWYINQDVEPQLYSLSQVIGTAGVP-VYLPPNGISGNPYGMLFGRPVIPVEYAETLGTEGDISLVDMSQYVLADKGGVQAASSMHVAFLTDEMVFRISYRVDGEPIWHAPLIPFKGTKTQSPFITLASR 467
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A497ATT3_9CHLR (Phage major capsid protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497ATT3_9CHLR) HSP 1 Score: 186 bits (473), Expect = 3.180e-54 Identity = 94/168 (55.95%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 1 SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRS 504
S A V++ KESGQAA++IVAENI+ M++RM A SR N+ W INQD EPQL Q++L V T GGQL+Y+PP GLS + YA+++GRPV+P E+ T+G GDI+ A L Y I+KGGI+ A S+HV F+ D+ RF+ R+DG+P ++PLTP+KG+ T S FV LATRS
Sbjct: 283 SGALVSVSKESGQAADTIVAENIIKMYARMWARSRANAVWLINQDIEPQLFQLNLPVGT-GGQLLYVPPGGLSASPYASILGRPVLPVEYCGTVGDVGDIIFADLGQYQMINKGGIDAASSIHVRFVYDETCYRFVYRVDGQPKWSKPLTPFKGSNTLSPFVALATRS 449
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A0F8XZ99_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F8XZ99_9ZZZZ) HSP 1 Score: 179 bits (455), Expect = 3.860e-54 Identity = 94/168 (55.95%), Postives = 117/168 (69.64%), Query Frame = 1
Query: 1 SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATRS 504
S A V++ KE+GQAA S+VAEN++ MWSRM A SR N+ W INQD EP + MS+ V T GG VYMPP GLS++ Y TL RPVI E +TLGT+GDI L L Y+ I KGGI+ A+S+HV+FLT Q A RFI R DG+P LTP+ G+ T S F++L TRS
Sbjct: 54 SGALVSVNKETGQAATSLVAENVIKMWSRMYARSRANAIWVINQDVEPAMFTMSIAVGT-GGVPVYMPPGGLSKSPYGTLFSRPVIAIEQCQTLGTKGDIYLLDLSQYLMIDKGGIKSAKSIHVQFLTGQTAYRFIYRADGQPLWNSVLTPFNGSNTLSPFISLDTRS 220
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A0F9RZH5_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9RZH5_9ZZZZ) HSP 1 Score: 186 bits (471), Expect = 8.680e-54 Identity = 93/169 (55.03%), Postives = 124/169 (73.37%), Query Frame = 1
Query: 1 SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGT-ATQSSFVTLATRS 504
S A VT+ KE+GQ A +IV+EN+ +MW+R+ A S+ NS W NQ+ PQL ++ TAG QLV+ PP+G++ A +AT+ GRP++ TEFN LGT GDI L L Y+TI+KG I Q SMHV+FLTDQ+ALRFI RIDG+ WE P+TP+KGT +TQSSF+ + TR+
Sbjct: 297 SDALVTVTKEAGQVAATIVSENLDNMWARLAARSQANSVWMYNQNAWPQLAALARDTGTAG-QLVFSPPTGIAGAPFATIYGRPLVATEFNAGLGTVGDITLTDLSQYVTITKGAIRQDVSMHVQFLTDQMALRFIFRIDGQTWENSPVTPFKGTGSTQSSFIAVETRA 464
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Match: A0A4P7Z005_9PROT (Phage major capsid protein n=1 Tax=Azospirillum sp. TSA2s TaxID=709810 RepID=A0A4P7Z005_9PROT) HSP 1 Score: 185 bits (470), Expect = 1.300e-53 Identity = 92/167 (55.09%), Postives = 119/167 (71.26%), Query Frame = 1
Query: 1 SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLHQMSLGVSTAGGQLVYMPPSGLSEASYATLMGRPVIPTEFNETLGTEGDIMLASLDDYITISKGGIEQAESMHVEFLTDQLALRFIMRIDGKPWETQPLTPYKGTATQSSFVTLATR 501
S A+V + KE+GQ+A +I EN+L MWSRM + SR NS WFINQD E QL+ M+ + TAG VY+P +G+S Y TL GRPVIP E+ +TLGTEGDI L L Y+ K G++ A SMHV FLT+++A RF+ R+DG+P PLTPYKG+ T+S F+TLATR
Sbjct: 302 SPAKVAVAKETGQSAGTIQYENVLKMWSRMWSRSRANSVWFINQDCESQLYAMAQVIGTAGVP-VYLPANGISGQPYGTLFGRPVIPVEYADTLGTEGDITLVDLSQYVLADKNGVQAASSMHVAFLTNEMAFRFVYRVDGEPIWHAPLTPYKGSQTKSPFITLATR 467 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124479.4983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124479.4983.1 >prot_M-pyrifera_M_contig124479.4983.1 ID=prot_M-pyrifera_M_contig124479.4983.1|Name=mRNA_M-pyrifera_M_contig124479.4983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp SSARVTIPKESGQAANSIVAENILHMWSRMRASSRKNSAWFINQDTEPQLback to top mRNA from alignment at M-pyrifera_M_contig124479:12..518- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124479.4983.1 ID=mRNA_M-pyrifera_M_contig124479.4983.1|Name=mRNA_M-pyrifera_M_contig124479.4983.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig124479:12..518- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124479:12..518- >mRNA_M-pyrifera_M_contig124479.4983.1 ID=mRNA_M-pyrifera_M_contig124479.4983.1|Name=mRNA_M-pyrifera_M_contig124479.4983.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig124479:12..518- (Macrocystis pyrifera P11B4 male)back to top |