mRNA_M-pyrifera_M_contig124472.4980.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig124472.4980.1
Unique NamemRNA_M-pyrifera_M_contig124472.4980.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: I2CRQ5_NANGC (Glutamate--cysteine ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ5_NANGC)

HSP 1 Score: 156 bits (395), Expect = 4.310e-46
Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 1 
Query:    1 IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDADHWENFQSTNWCNVRWKPPPADA----PDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDAN 375
            + V VDE  +  L+  G+DPIL+RH+AHLF+RDPLVIF+ A +VDD    +H+EN QSTNW +VRWKPPP       P +GWR ELRT+E+  TDFENAA TVF VLL+R+IL +DL LY+PI+ +D N
Sbjct:   23 VEVEVDEATEALLLSRGLDPILSRHIAHLFIRDPLVIFEGATEVDDLSSTEHFENIQSTNWQSVRWKPPPPSPGSHDPPIGWRTELRTMEIQLTDFENAAFTVFVVLLTRIILAFDLHLYVPITKLDTN 151
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: A0A1Y2HCP8_9FUNG (Glutamate--cysteine ligase n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HCP8_9FUNG)

HSP 1 Score: 162 bits (410), Expect = 3.480e-45
Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 1 
Query:    1 IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDADHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDAN 375
            IP+ +DEK++ +L   GVDP LARH+AHLF+RDPLVI+      DDS   DH+EN QSTNW  +R+KPPP   P++GWRVE R +EV P+DFENAA +VF VL+SRVIL  DLDLYIP+SLVDAN
Sbjct:  109 IPLPIDEKIEARLQSEGVDPQLARHIAHLFIRDPLVIYRELLHQDDSTVTDHFENLQSTNWQTMRFKPPPTTHPELGWRVEFRAMEVQPSDFENAAFSVFVVLISRVILCLDLDLYIPLSLVDAN 233
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: A0A812IVP6_9DINO (Glutamate--cysteine ligase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812IVP6_9DINO)

HSP 1 Score: 164 bits (415), Expect = 1.670e-44
Identity = 79/126 (62.70%), Postives = 98/126 (77.78%), Query Frame = 1 
Query:   13 VDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSA-RKVDDSKDADHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDANFVAA 387
            +D+    QL+ GGVD  LA+H+AHLF+RDPLVIF  A  +VDD    +H+EN QSTNW +VRWKPPP D  D+GWRVE+RT+EV  TDFENAA TVF+VL SRVILF+DL++Y+P+SLV  NF  A
Sbjct:  571 IDQGAYAQLVAGGVDDKLAQHIAHLFIRDPLVIFTGAISEVDDDASTEHFENIQSTNWQSVRWKPPPPDREDIGWRVEIRTMEVQLTDFENAAFTVFTVLASRVILFFDLNMYVPMSLVQENFARA 696
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: I2CPA3_NANGC (Glutamate--cysteine ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPA3_NANGC)

HSP 1 Score: 155 bits (391), Expect = 3.420e-43
Identity = 74/125 (59.20%), Postives = 95/125 (76.00%), Query Frame = 1 
Query:   13 VDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDADHWENFQSTNWCNVRWKPPPA----DAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDAN 375
            VDE+++  L+ GGVD  L+RH++HLFVRDPLVIFD A  VDD++  +H+EN QSTNW  VRWKPPP     D P +GWR E R++E+  TDFENAA TVF +LL+RV+L +DL LY+P+S VD N
Sbjct:   19 VDEELESLLLAGGVDRALSRHISHLFVRDPLVIFDDAIAVDDARTTEHFENIQSTNWQTVRWKPPPQKTNPDDPHIGWRTEFRSMEIQLTDFENAAFTVFVILLTRVVLTFDLSLYLPLSKVDDN 143
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: A0A7S1CAJ8_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAJ8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 3.590e-43
Identity = 79/125 (63.20%), Postives = 93/125 (74.40%), Query Frame = 1 
Query:    1 IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDADHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDAN 375
            +PV  DE     L   GVD +LA+HVAHLFVRDPLVI+    ++DD K  DHWEN QSTNW +VRWKPPP D  D+GWRVELRT+EV  + FENAA TV + LL RVILF+DL+LYIP+S VD N
Sbjct:  160 MPVQYDEDSLATLRAAGVDEVLAKHVAHLFVRDPLVIYSDRVELDDDKAVDHWENLQSTNWQSVRWKPPPPDT-DMGWRVELRTMEVQLSPFENAAFTVVTALLCRVILFFDLNLYIPLSKVDEN 283
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: M5BVW8_THACB (Glutamate--cysteine ligase n=2 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5BVW8_THACB)

HSP 1 Score: 156 bits (394), Expect = 9.670e-43
Identity = 75/129 (58.14%), Postives = 100/129 (77.52%), Query Frame = 1 
Query:    1 IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDADHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDANFVAA 387
            +PV++DEKV  +L E  +D +LA+H+AHLF+RDPLV+F  A ++DD+K  DH+E+ QSTNW ++R+KPPPA +  +GWRVE RT+EV PTDFENAA ++F VLLSR IL + L+ YIPIS VD N   A
Sbjct:  363 VPVLIDEKVYDRLRENNIDDLLAKHIAHLFIRDPLVVFSEAIELDDTKSTDHFESLQSTNWQSLRFKPPPAGSA-IGWRVEFRTMEVQPTDFENAAFSIFIVLLSRAILSFGLNFYIPISRVDENMARA 490
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: A0A5A8DAK8_CAFRO (Glutamate--cysteine ligase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DAK8_CAFRO)

HSP 1 Score: 158 bits (399), Expect = 2.700e-42
Identity = 79/130 (60.77%), Postives = 96/130 (73.85%), Query Frame = 1 
Query:    1 IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIF-DSARKVDDSKDADHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDANFVAA 387
            +PV  D+    + + GG+D  LA HVA LFVRDPLVIF +    VDD+ +ADHWEN QSTNW ++RWKPPP D+  +GWRVELRT+E   TDF NAALTV S L SRV+LF+DL L +P+SLVDAN V A
Sbjct:  611 LPVPRDDAAFERCVAGGLDEALAAHVASLFVRDPLVIFSERVESVDDAAEADHWENIQSTNWRSMRWKPPPPDSDAIGWRVELRTMEAQATDFANAALTVTSALFSRVVLFFDLSLLVPLSLVDANMVTA 740
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: A0A7S2YK69_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YK69_9STRA)

HSP 1 Score: 150 bits (378), Expect = 3.180e-42
Identity = 75/125 (60.00%), Postives = 95/125 (76.00%), Query Frame = 1 
Query:   16 DEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSA-RKVDDSKDADHWENFQSTNWCNVRWKPPPA----DAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDAN 375
            DE+V  Q  E GVDP LA+H+AHLF+RDPLVIF+ A  +VDD K  +H+E+ QSTNW  VRWKPPP     + P +GWR E R++E+  TD+EN+A TVF +LL+RVIL +DL+LYIPIS VDAN
Sbjct:   23 DEEVFKQCREAGVDPALAQHIAHLFIRDPLVIFEGAVEEVDDEKQTEHFESIQSTNWQTVRWKPPPPRNDPNDPHIGWRTEFRSMEIQLTDYENSAFTVFIILLTRVILAFDLNLYIPISRVDAN 147
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: A0A0L0T9C3_ALLM3 (Glutamate--cysteine ligase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T9C3_ALLM3)

HSP 1 Score: 153 bits (387), Expect = 7.370e-42
Identity = 75/125 (60.00%), Postives = 95/125 (76.00%), Query Frame = 1 
Query:    1 IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDADHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDAN 375
            I +V+D  ++ +L + GVDP+LARH+AHLF+RDPLV++      DDS   DH+EN QSTNW  +R+KPPP   PD+GWRVE R++E   TDFENAA +VF VLLSRVIL  DLDLY+P+SLVD N
Sbjct:  126 IDLVIDADIEARLRKDGVDPLLARHLAHLFIRDPLVLYRELLDQDDSVAMDHFENIQSTNWQTMRFKPPPTAHPDLGWRVEFRSMEAQLTDFENAAFSVFIVLLSRVILCLDLDLYLPLSLVDKN 250
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BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Match: A0A8H3E3S5_9AGAM (Glutamate--cysteine ligase n=6 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3E3S5_9AGAM)

HSP 1 Score: 155 bits (392), Expect = 1.240e-41
Identity = 74/129 (57.36%), Postives = 101/129 (78.29%), Query Frame = 1 
Query:    1 IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDADHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVFSVLLSRVILFYDLDLYIPISLVDANFVAA 387
            +P++VD+KV  +L E  +D +LA+H+AHLF+RDPLV+F  A ++DD+K  DH+E+ QSTNW ++R+KPPPA++  +GWRVE RT+EV PTDFENAA ++F VLLSR IL + L+ YIPIS VD N   A
Sbjct:  363 VPILVDDKVYQRLRENNIDDLLAKHIAHLFIRDPLVVFSEAIELDDTKSTDHFESLQSTNWQSLRFKPPPANSA-IGWRVEFRTMEVQPTDFENAAFSIFVVLLSRAILSFGLNFYIPISRVDENMARA 490
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124472.4980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I2CRQ5_NANGC4.310e-4658.14Glutamate--cysteine ligase (Fragment) n=1 Tax=Nann... [more]
A0A1Y2HCP8_9FUNG3.480e-4563.20Glutamate--cysteine ligase n=1 Tax=Catenaria angui... [more]
A0A812IVP6_9DINO1.670e-4462.70Glutamate--cysteine ligase n=1 Tax=Symbiodinium sp... [more]
I2CPA3_NANGC3.420e-4359.20Glutamate--cysteine ligase (Fragment) n=1 Tax=Nann... [more]
A0A7S1CAJ8_9STRA3.590e-4363.20Glutamate--cysteine ligase (Fragment) n=1 Tax=Bico... [more]
M5BVW8_THACB9.670e-4358.14Glutamate--cysteine ligase n=2 Tax=Thanatephorus c... [more]
A0A5A8DAK8_CAFRO2.700e-4260.77Glutamate--cysteine ligase n=3 Tax=Cafeteria roenb... [more]
A0A7S2YK69_9STRA3.180e-4260.00Glutamate--cysteine ligase (Fragment) n=1 Tax=Amph... [more]
A0A0L0T9C3_ALLM37.370e-4260.00Glutamate--cysteine ligase n=1 Tax=Allomyces macro... [more]
A0A8H3E3S5_9AGAM1.240e-4157.36Glutamate--cysteine ligase n=6 Tax=Rhizoctonia sol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124472contigM-pyrifera_M_contig124472:2..519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.0
Seed ortholog evalue1.2e-35
Seed eggNOG ortholog2850.Phatr27240
Preferred nameGCLC
KEGG rclassRC00064,RC00090
KEGG koko:K11204
KEGG ReactionR00894,R10993
KEGG Pathwayko00270,ko00480,ko01100,ko04212,ko04216,map00270,map00480,map01100,map04212,map04216
KEGG ModuleM00118
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000166,GO:0000287,GO:0000302,GO:0000303,GO:0000305,GO:0000902,GO:0000904,GO:0001101,GO:0001678,GO:0002009,GO:0002165,GO:0003008,GO:0003013,GO:0003018,GO:0003254,GO:0003674,GO:0003824,GO:0004357,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006082,GO:0006355,GO:0006518,GO:0006520,GO:0006534,GO:0006536,GO:0006575,GO:0006732,GO:0006749,GO:0006750,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006915,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007568,GO:0007584,GO:0008015,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009058,GO:0009064,GO:0009069,GO:0009266,GO:0009408,GO:0009410,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010941,GO:0012501,GO:0014070,GO:0014823,GO:0015711,GO:0015833,GO:0016043,GO:0016595,GO:0016597,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0017109,GO:0019184,GO:0019219,GO:0019222,GO:0019725,GO:0019748,GO:0019752,GO:0019852,GO:0022008,GO:0023051,GO:0023057,GO:0030030,GO:0030154,GO:0030162,GO:0030182,GO:0030435,GO:0030554,GO:0030587,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031406,GO:0031667,GO:0032268,GO:0032269,GO:0032270,GO:0032354,GO:0032434,GO:0032436,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033500,GO:0034097,GO:0034284,GO:0034635,GO:0034641,GO:0034698,GO:0035107,GO:0035114,GO:0035120,GO:0035150,GO:0035220,GO:0035239,GO:0035295,GO:0035690,GO:0035728,GO:0035729,GO:0036094,GO:0042176,GO:0042221,GO:0042391,GO:0042398,GO:0042493,GO:0042542,GO:0042592,GO:0042593,GO:0042886,GO:0042939,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043436,GO:0043523,GO:0043524,GO:0043531,GO:0043603,GO:0043604,GO:0043648,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044344,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0044752,GO:0045454,GO:0045732,GO:0045862,GO:0045892,GO:0045934,GO:0046677,GO:0046685,GO:0046686,GO:0046688,GO:0046872,GO:0046937,GO:0046938,GO:0046982,GO:0046983,GO:0048037,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050662,GO:0050789,GO:0050794,GO:0050801,GO:0050865,GO:0050866,GO:0050880,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051409,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051881,GO:0051900,GO:0055082,GO:0060255,GO:0060429,GO:0060548,GO:0060562,GO:0061136,GO:0061564,GO:0061687,GO:0065007,GO:0065008,GO:0070555,GO:0070848,GO:0070887,GO:0071214,GO:0071229,GO:0071230,GO:0071241,GO:0071248,GO:0071260,GO:0071276,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071363,GO:0071371,GO:0071372,GO:0071375,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071585,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0071840,GO:0072337,GO:0072348,GO:0080090,GO:0090066,GO:0090702,GO:0097066,GO:0097067,GO:0097068,GO:0097069,GO:0097159,GO:0097237,GO:0097367,GO:0097501,GO:0098754,GO:0098849,GO:0099120,GO:0104004,GO:0120036,GO:0120039,GO:1901214,GO:1901215,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902494,GO:1902679,GO:1903050,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903364,GO:1903506,GO:1903507,GO:1904386,GO:1904387,GO:1990170,GO:1990748,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000489,GO:2000490,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.Glutamate-cysteine ligase
EggNOG OGs2XBFY@2836,KOG3754@1,KOG3754@2759
EC6.3.2.2
COG Functional cat.H
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons2
Model size387
Cds size387
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815762.1653519-CDS-M-pyrifera_M_contig124472:1..2301622815762.1653519-CDS-M-pyrifera_M_contig124472:1..230Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124472 2..230 -
1692277557.4507432-CDS-M-pyrifera_M_contig124472:1..2301692277557.4507432-CDS-M-pyrifera_M_contig124472:1..230Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124472 2..230 -
1622815762.1803052-CDS-M-pyrifera_M_contig124472:361..5191622815762.1803052-CDS-M-pyrifera_M_contig124472:361..519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124472 362..519 -
1692277557.47161-CDS-M-pyrifera_M_contig124472:361..5191692277557.47161-CDS-M-pyrifera_M_contig124472:361..519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124472 362..519 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124472.4980.1prot_M-pyrifera_M_contig124472.4980.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig124472 2..519 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig124472.4980.1

>prot_M-pyrifera_M_contig124472.4980.1 ID=prot_M-pyrifera_M_contig124472.4980.1|Name=mRNA_M-pyrifera_M_contig124472.4980.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
IPVVVDEKVQGQLIEGGVDPILARHVAHLFVRDPLVIFDSARKVDDSKDA
DHWENFQSTNWCNVRWKPPPADAPDVGWRVELRTIEVAPTDFENAALTVF
SVLLSRVILFYDLDLYIPISLVDANFVAA
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mRNA from alignment at M-pyrifera_M_contig124472:2..519-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig124472.4980.1 ID=mRNA_M-pyrifera_M_contig124472.4980.1|Name=mRNA_M-pyrifera_M_contig124472.4980.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=518bp|location=Sequence derived from alignment at M-pyrifera_M_contig124472:2..519- (Macrocystis pyrifera P11B4 male)
ATCCCTGTGGTGGTGGATGAAAAAGTACAAGGACAGCTCATTGAAGGAGG
AGTGGATCCCATCCTTGCACGACATGTTGCGCACCTTTTTGTCAGAGACC
CTCTGGTCATCTTTGACAGTGCAAGAAAAGTCGATGACAGCAAAGATGCA
GACCATTGGTAAGTGTGAGGGAAAAGGGGGAGAAGGGGAAGAGGGGAGAA
AGAGTTGGGTGGGAGGAAGGGTGGTTTCATTGACTCACGTACCAATGTTT
TCTGCTTTCTCTATGTGTGTTTCTTTTCATGTTGTGCAGGGAAAACTTCC
AGTCTACGAACTGGTGTAATGTGCGGTGGAAGCCACCACCGGCAGATGCT
CCAGATGTTGGGTGGCGAGTGGAGTTGCGAACAATTGAAGTAGCTCCTAC
TGATTTTGAAAACGCTGCATTGACTGTGTTTTCTGTATTATTGTCGCGTG
TCATTTTGTTCTACGATTTGGACTTGTACATTCCCATTTCGCTTGTGGAT
GCAAACTTTGTTGCAGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig124472:2..519-

>mRNA_M-pyrifera_M_contig124472.4980.1 ID=mRNA_M-pyrifera_M_contig124472.4980.1|Name=mRNA_M-pyrifera_M_contig124472.4980.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig124472:2..519- (Macrocystis pyrifera P11B4 male)
ATCCCTGTGGTGGTGGATGAAAAAGTACAAGGACAGCTCATTGAAGGAGG
AGTGGATCCCATCCTTGCACGACATGTTGCGCACCTTTTTGTCAGAGACC
CTCTGGTCATCTTTGACAGTGCAAGAAAAGTCGATGACAGCAAAGATGCA
GACCATTGATCCCTGTGGTGGTGGATGAAAAAGTACAAGGACAGCTCATT
GAAGGAGGAGTGGATCCCATCCTTGCACGACATGTTGCGCACCTTTTTGT
CAGAGACCCTCTGGTCATCTTTGACAGTGCAAGAAAAGTCGATGACAGCA
AAGATGCAGACCATTGGGAAAACTTCCAGTCTACGAACTGGTGTAATGTG
CGGTGGAAGCCACCACCGGCAGATGCTCCAGATGTTGGGTGGCGAGTGGA
GTTGCGAACAATTGAAGTAGCTCCTACTGATTTTGAAAACGCTGCATTGA
CTGTGTTTTCTGTATTATTGTCGCGTGTCATTTTGTTCTACGATTTGGAC
TTGTACATTCCCATTTCGCTTGTGGATGCAAACTTTGTTGCAGCGGGAAA
ACTTCCAGTCTACGAACTGGTGTAATGTGCGGTGGAAGCCACCACCGGCA
GATGCTCCAGATGTTGGGTGGCGAGTGGAGTTGCGAACAATTGAAGTAGC
TCCTACTGATTTTGAAAACGCTGCATTGACTGTGTTTTCTGTATTATTGT
CGCGTGTCATTTTGTTCTACGATTTGGACTTGTACATTCCCATTTCGCTT
GTGGATGCAAACTTTGTTGCAGCG
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