mRNA_M-pyrifera_M_contig124468.4977.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A2E7KFZ5_9PLAN (PDZ domain-containing protein n=13 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KFZ5_9PLAN) HSP 1 Score: 340 bits (872), Expect = 5.120e-117 Identity = 169/172 (98.26%), Postives = 171/172 (99.42%), Query Frame = 1
Query: 1 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 516
TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLN LLAKA+PGQNVTLSV+QVGEKGAVSKVNVTLGWAERIN
Sbjct: 17 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNTLLAKAQPGQNVTLSVVQVGEKGAVSKVNVTLGWAERIN 188
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A355GC51_9PLAN (PDZ domain-containing protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GC51_9PLAN) HSP 1 Score: 287 bits (735), Expect = 3.000e-96 Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 1
Query: 1 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 516
TLFL+VNYESQAQE AP + + RQKYAALMS+AHKARLNQHYSKYYKATLGVV TDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPA+KAGLMKYDIILSFG HRLASVRQLN+LLAKA+PGQ+V LSVIQVGE+GAVS V+VTLGW+ERIN
Sbjct: 17 TLFLVVNYESQAQE-----APAAKQDGSTARQKYAALMSDAHKARLNQHYSKYYKATLGVVCTDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPAEKAGLMKYDIILSFGSHRLASVRQLNSLLAKAQPGQDVKLSVIQVGEQGAVSTVDVTLGWSERIN 183
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A517RD66_9PLAN (PDZ domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RD66_9PLAN) HSP 1 Score: 282 bits (722), Expect = 2.850e-94 Identity = 143/172 (83.14%), Postives = 153/172 (88.95%), Query Frame = 1
Query: 1 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 516
TLFL+VNYESQAQE + N S RQKYAALMSEAHKARLNQHYSKYYKATLG+V TDASGPLAAHLTNGAPDWWTGVGT+++GNPGYGVVIMHVAPGSPAD AGLMKYDIILSFGKHRLASVRQLNALLAKA+PGQ+V LSVIQVGE GAVS V+V LGW+ERIN
Sbjct: 17 TLFLVVNYESQAQEGSVNNKTTSTA-----RQKYAALMSEAHKARLNQHYSKYYKATLGIVGTDASGPLAAHLTNGAPDWWTGVGTDINGNPGYGVVIMHVAPGSPADNAGLMKYDIILSFGKHRLASVRQLNALLAKAQPGQDVKLSVIQVGENGAVSTVDVKLGWSERIN 183
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A517VZV6_9PLAN (PDZ domain (Also known as DHR or GLGF) n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZV6_9PLAN) HSP 1 Score: 279 bits (714), Expect = 4.690e-93 Identity = 141/171 (82.46%), Postives = 150/171 (87.72%), Query Frame = 1
Query: 4 LFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 516
LFL+++YESQAQE AP S RQKYAALMSEAHKA LNQHYSKYYKATLG++AT ASGPLAAHLTNGAPDWWTGVGT+LDGNPGYGVVIMHVAPGSPAD+AGLMKYDIILSFGKHRLASVRQLNALL KA+PGQ V L VIQVGE+GAVS V VTLGWAERIN
Sbjct: 18 LFLVLSYESQAQEGAPQKKAASTA-----RQKYAALMSEAHKANLNQHYSKYYKATLGIIATAASGPLAAHLTNGAPDWWTGVGTDLDGNPGYGVVIMHVAPGSPADQAGLMKYDIILSFGKHRLASVRQLNALLEKAQPGQKVALKVIQVGEQGAVSDVEVTLGWAERIN 183
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A3M0YHL9_9GAMM (PDZ domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YHL9_9GAMM) HSP 1 Score: 71.2 bits (173), Expect = 6.400e-12 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 271 NPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAE 507
+PG GV++ V P SPA KAGL YDI+LSF +L S RQL L+ +++PGQ V L V++ G+ + + VTLG E
Sbjct: 42 SPGQGVLVAEVIPDSPAAKAGLKPYDILLSFDDQKLFSPRQLRELVQRSQPGQEVKLKVLRQGQ---IQTITVTLGEQE 117
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A1W9W0C4_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium 4572_87 TaxID=1972443 RepID=A0A1W9W0C4_9DELT) HSP 1 Score: 65.5 bits (158), Expect = 2.440e-9 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 283 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKV 483
GV+I HVA GSPA AGL D+I FG R+ V+Q+ +L+ KA+PGQ VTL++++ G + +++ V
Sbjct: 120 GVIISHVAKGSPALTAGLRSGDVIRRFGATRILDVKQMQSLILKAQPGQKVTLTILRDGRQNSLNVV 186
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A831W430_9GAMM (PDZ domain-containing protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A831W430_9GAMM) HSP 1 Score: 61.6 bits (148), Expect = 3.160e-8 Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 283 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLG 498
GV++ VAPGSPAD+AG+ +DI+L FG +L + QL L+ +PG V++ +++ G V V VT+G
Sbjct: 68 GVLVRQVAPGSPADRAGIRPFDILLGFGDQKLFAPEQLVKLVRSGKPGDKVSIELVR---SGRVMPVEVTIG 136
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A3M0YG40_9GAMM (PDZ domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YG40_9GAMM) HSP 1 Score: 60.8 bits (146), Expect = 4.610e-8 Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 271 NPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAE 507
+PG GV++ V P SPA KAGL +D++L+F ++ S RQL L+ PG+ V L V++ G+ + ++ TLG E
Sbjct: 48 SPGQGVLVAEVIPASPAAKAGLKPFDVLLAFDGEKVFSPRQLQELVRGKRPGETVKLEVLRQGQ---IQTLSATLGEQE 123
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A7C1UD24_9GAMM (PDZ domain-containing protein n=1 Tax=Thiothrix sp. TaxID=1032 RepID=A0A7C1UD24_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 1.120e-7 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 283 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLG 498
GV++ V GSPA+K+GL ++DI+LSF +L S +QL L++ A+P VTLS+I+ G K + V LG
Sbjct: 74 GVMVESVVLGSPAEKSGLTRFDIVLSFNNQKLFSPQQLAQLVSAAKPDDEVTLSIIRAGVK---QDIKVKLG 142
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A2V8NEH0_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8NEH0_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 1.200e-7 Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 283 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAE 507
GV + V+PGSPADKAGL K D+IL F + R+L L+ ++ P Q V L++ G+ +VNVTLG E
Sbjct: 80 GVGVNRVSPGSPADKAGLKKGDVILQFDNEPVTGTRKLFRLIGESAPEQTVRLTI---SRNGSEQQVNVTLGQRE 151 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124468.4977.1 >prot_M-pyrifera_M_contig124468.4977.1 ID=prot_M-pyrifera_M_contig124468.4977.1|Name=mRNA_M-pyrifera_M_contig124468.4977.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYback to top mRNA from alignment at M-pyrifera_M_contig124468:3..518+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124468.4977.1 ID=mRNA_M-pyrifera_M_contig124468.4977.1|Name=mRNA_M-pyrifera_M_contig124468.4977.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig124468:3..518+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124468:3..518+ >mRNA_M-pyrifera_M_contig124468.4977.1 ID=mRNA_M-pyrifera_M_contig124468.4977.1|Name=mRNA_M-pyrifera_M_contig124468.4977.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig124468:3..518+ (Macrocystis pyrifera P11B4 male)back to top |