mRNA_M-pyrifera_M_contig124446.4971.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A7Y5C6Y4_9BACT (Tryptophan synthase beta chain n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C6Y4_9BACT) HSP 1 Score: 279 bits (713), Expect = 1.340e-90 Identity = 139/172 (80.81%), Postives = 150/172 (87.21%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLM+ L ELE AY AQ D F AEL LRK+Y+GR TPLYFA R TEHL GAKVYFKREDLAHTGAHKINNALGQ LLAKRMGK+R+IAETGAGQHGVATATACALLGLDC VYMG ED+ERQKLNVFRMRLLGS+V V SG+KTLKDAIN+A+RDWVT VGD+HYVLG
Sbjct: 34 ETLMHPLIELEEAYAGAQTDSAFQAELERLRKHYIGRPTPLYFARRFTEHLAGAKVYFKREDLAHTGAHKINNALGQTLLAKRMGKRRVIAETGAGQHGVATATACALLGLDCEVYMGTEDMERQKLNVFRMRLLGSKVTPVDSGTKTLKDAINEAMRDWVTNVGDTHYVLG 205
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A7V2Y4U1_9BACT (Tryptophan synthase beta chain n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y4U1_9BACT) HSP 1 Score: 273 bits (697), Expect = 3.200e-88 Identity = 137/172 (79.65%), Postives = 147/172 (85.47%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLM ALDELE AY +A+ DP F L + YVGR TPLYFA R TEHLGGAKVYFKREDLAHTGAHKINNALGQ LLAKRMGK+R+IAETGAGQHGVATATA ALLGL+C +YMG EDIERQKLNVFRMRLLGS V+ V SGSKTLKDAIN+ALRDWVT VG +HYVLG
Sbjct: 32 ETLMCALDELERAYADARTDPDFQTVLRDYQATYVGRPTPLYFARRFTEHLGGAKVYFKREDLAHTGAHKINNALGQALLAKRMGKRRLIAETGAGQHGVATATAAALLGLECDIYMGTEDIERQKLNVFRMRLLGSRVIPVASGSKTLKDAINEALRDWVTNVGHTHYVLG 203
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A7C2VF00_9AQUI (Tryptophan synthase beta chain n=2 Tax=Aquificaceae TaxID=64898 RepID=A0A7C2VF00_9AQUI) HSP 1 Score: 268 bits (685), Expect = 1.550e-86 Identity = 131/172 (76.16%), Postives = 149/172 (86.63%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLMYAL+ELE AYKEA+ DP+F E N K++ GR TPLYFA LT++ GGAK+Y KREDL HTGAHKINN LGQ LLAKRMGK+RIIAETGAGQHGVATATACALLGL+CV+YMG ED ERQKLNVFRMRLLG+EV VKSGS+TLKDAIN+ALRDWVT V ++HY++G
Sbjct: 24 ETLMYALEELEEAYKEAKEDPSFWEEFNYYLKSFAGRPTPLYFARNLTQYAGGAKIYIKREDLLHTGAHKINNTLGQALLAKRMGKRRIIAETGAGQHGVATATACALLGLECVIYMGEEDAERQKLNVFRMRLLGAEVRVVKSGSRTLKDAINEALRDWVTNVENTHYIIG 195
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: Q5GMK5_9BACT (Tryptophan synthase beta chain n=1 Tax=uncultured bacterium TaxID=77133 RepID=Q5GMK5_9BACT) HSP 1 Score: 267 bits (683), Expect = 4.550e-86 Identity = 133/172 (77.33%), Postives = 150/172 (87.21%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLMYAL+ELE A++ + D F A L+ R++Y+GR TPLYFA R+TEHLGGAK+YFKREDLAHTGAHKINNALGQ LLA+RMGK RIIAETGAGQHGVATATA ALLGL+C +YMG EDIERQKLNVFRMRLLGS+V V SGSKTLKDAIN+ALRDWVT V ++HYVLG
Sbjct: 34 ETLMYALEELEDAFRASLRDRAFLATLDTYRRDYIGRPTPLYFAQRMTEHLGGAKIYFKREDLAHTGAHKINNALGQTLLAQRMGKTRIIAETGAGQHGVATATAAALLGLECEIYMGEEDIERQKLNVFRMRLLGSKVNPVASGSKTLKDAINEALRDWVTNVRNTHYVLG 205
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A7G8BHG7_9BACT (Tryptophan synthase beta chain n=2 Tax=unclassified Acidobacterium TaxID=2625945 RepID=A0A7G8BHG7_9BACT) HSP 1 Score: 266 bits (680), Expect = 9.360e-86 Identity = 133/172 (77.33%), Postives = 149/172 (86.63%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLM AL+ELE AY EAQADPTF AEL+ L ++Y GR TPLYFASRLTE LGGAKVY KREDL HTGAHKINN +GQ LLAKRMGKKRIIAETGAGQHGVA+AT CAL GL+CVVYMG ED+ RQ+LNV+RMRLLG+EV V SGS+TLKDAIN+A+RDWVT V +HY+LG
Sbjct: 25 ETLMTALEELEHAYAEAQADPTFHAELDLLLRDYAGRPTPLYFASRLTEQLGGAKVYLKREDLLHTGAHKINNCIGQGLLAKRMGKKRIIAETGAGQHGVASATVCALFGLECVVYMGEEDMRRQELNVYRMRLLGAEVRGVSSGSRTLKDAINEAMRDWVTNVRTTHYLLG 196
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A1V6EYA7_9BACT (Tryptophan synthase beta chain n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6EYA7_9BACT) HSP 1 Score: 265 bits (677), Expect = 3.460e-85 Identity = 130/172 (75.58%), Postives = 147/172 (85.47%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLMYALDELE AY+ A ADP F A+L R++YVGR TPLYFA RLT LGGA++YFKREDLAHTGAHKINNALGQCLLA+RM K R+IAETGAGQHGVATATA ALL L+C VYMGAED+ERQ+LNVFRMRLLG++V V +GS+TLKDAIN+ALRDW V +HYVLG
Sbjct: 33 ETLMYALDELEAAYRSAMADPAFQADLEQRRQHYVGRPTPLYFAERLTASLGGARIYFKREDLAHTGAHKINNALGQCLLARRMNKPRVIAETGAGQHGVATATAAALLDLECEVYMGAEDMERQRLNVFRMRLLGAKVTCVNAGSRTLKDAINEALRDWAANVEHTHYVLG 204
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A6C1BSY6_9AQUI (Tryptophan synthase beta chain n=1 Tax=Hydrogenobacter sp. T-8 TaxID=1632019 RepID=A0A6C1BSY6_9AQUI) HSP 1 Score: 265 bits (676), Expect = 3.760e-85 Identity = 129/172 (75.00%), Postives = 148/172 (86.05%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLMYAL+ELE AY +A+ DP+F ELN +++ GR TPLYFA RLT++ GGA++Y KREDL HTGAHKINN LGQ LL KRMGKKR+IAETGAGQHGVATATACALLGL+CVVYMG ED ERQKLNVFRMRLLG+EV VKSGS+TLKDAIN+ALRDWVT V +HY++G
Sbjct: 26 ETLMYALEELERAYAKAKEDPSFWEELNHYLRSFAGRPTPLYFAKRLTQYAGGARIYIKREDLLHTGAHKINNTLGQALLTKRMGKKRVIAETGAGQHGVATATACALLGLECVVYMGEEDAERQKLNVFRMRLLGAEVRIVKSGSRTLKDAINEALRDWVTNVETTHYIIG 197
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A3M2GY20_9BACT (Tryptophan synthase beta chain n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2GY20_9BACT) HSP 1 Score: 264 bits (675), Expect = 4.340e-85 Identity = 129/172 (75.00%), Postives = 147/172 (85.47%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLMYAL+ELE Y A+ DP+F EL+ K++ GR TPLYFA RLTE+ GGAK+Y KREDL HTGAHKINN LGQ LLAKRMGK+RIIAETGAGQHGVATATACALLGLDC+VYMG ED ERQKLNVFRM LLG++V VKSGS+TLKDAIN+ALRDWVT V ++HY++G
Sbjct: 21 ETLMYALEELEKEYNRAKQDPSFWEELHLYLKDFAGRPTPLYFAKRLTEYAGGAKIYIKREDLLHTGAHKINNTLGQALLAKRMGKRRIIAETGAGQHGVATATACALLGLDCIVYMGEEDAERQKLNVFRMELLGAQVRVVKSGSRTLKDAINEALRDWVTNVENTHYIIG 192
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: UPI0005914DA0 (tryptophan synthase subunit beta n=2 Tax=Bhargavaea cecembensis TaxID=394098 RepID=UPI0005914DA0) HSP 1 Score: 264 bits (674), Expect = 9.520e-85 Identity = 130/172 (75.58%), Postives = 147/172 (85.47%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETLM AL ELETAY+EA+ DP F EL ++ K+YVGRETPLYFA RLTE GGAK+Y KREDL HTGAHKINNALGQ LLAKRMGK++IIAETGAGQHGVATATACALLGLDC+V+MG EDI RQ+LNVFRM LLG+ VVSV GS TLKDA+N+ALR WV V D+HY++G
Sbjct: 30 ETLMPALLELETAYREAKEDPAFIEELESILKDYVGRETPLYFAGRLTEAAGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGKRKIIAETGAGQHGVATATACALLGLDCIVFMGREDIRRQELNVFRMELLGASVVSVDGGSGTLKDAVNEALRHWVANVSDTHYIIG 201
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Match: A0A372IMY8_9BACT (Tryptophan synthase beta chain n=1 Tax=Acidipila sp. 4G-K13 TaxID=2303751 RepID=A0A372IMY8_9BACT) HSP 1 Score: 263 bits (673), Expect = 1.010e-84 Identity = 132/172 (76.74%), Postives = 148/172 (86.05%), Query Frame = 1
Query: 1 ETLMYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGAKVYFKREDLAHTGAHKINNALGQCLLAKRMGKKRIIAETGAGQHGVATATACALLGLDCVVYMGAEDIERQKLNVFRMRLLGSEVVSVKSGSKTLKDAINDALRDWVTTVGDSHYVLG 516
ETL+ ALDELE AY EAQADP F A+L+ L ++YVGR TPLYFASRLTE LGGAK+Y KREDL HTGAHKINN +GQ LLA RMGKKRIIAETGAGQHGVATAT CAL GL+CVVYMG ED+ RQ+LNV+RMRLLG+EV V SGSKTLKDAIN+A+RDWVT V +HY+LG
Sbjct: 23 ETLVAALDELEHAYAEAQADPDFHAKLDGLLRDYVGRPTPLYFASRLTEQLGGAKIYLKREDLLHTGAHKINNCIGQGLLALRMGKKRIIAETGAGQHGVATATVCALFGLECVVYMGEEDMRRQELNVYRMRLLGAEVRGVDSGSKTLKDAINEAMRDWVTNVRTTHYLLG 194 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124446.4971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124446.4971.1 >prot_M-pyrifera_M_contig124446.4971.1 ID=prot_M-pyrifera_M_contig124446.4971.1|Name=mRNA_M-pyrifera_M_contig124446.4971.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp MYALDELETAYKEAQADPTFTAELNALRKNYVGRETPLYFASRLTEHLGGback to top mRNA from alignment at M-pyrifera_M_contig124446:2..517- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124446.4971.1 ID=mRNA_M-pyrifera_M_contig124446.4971.1|Name=mRNA_M-pyrifera_M_contig124446.4971.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig124446:2..517- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124446:2..517- >mRNA_M-pyrifera_M_contig124446.4971.1 ID=mRNA_M-pyrifera_M_contig124446.4971.1|Name=mRNA_M-pyrifera_M_contig124446.4971.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig124446:2..517- (Macrocystis pyrifera P11B4 male)back to top |