mRNA_M-pyrifera_M_contig124443.4969.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A518A238_9PLAN (Putative periplasmic serine endoprotease DegP-like n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518A238_9PLAN) HSP 1 Score: 291 bits (746), Expect = 1.150e-92 Identity = 150/171 (87.72%), Postives = 162/171 (94.74%), Query Frame = 1
Query: 4 KPVGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENKTQNIKVGHYKE 516
+PV LHSEVKSVLMSLYAGDTVSLTV+REGAKEPLTFK TLT+KLVPFESGFLGILPVRE++NQTT+GVGVRYVIPDSAA KAG+K KD+ILEFNQQKVTS EMLAFLVNHLRP D ASLLISRD+KPVKL+VKLQKTP+AVPAE+PTQAIPSRTAQENK Q IKVGHYKE
Sbjct: 293 RPVTLHSEVKSVLMSLYAGDTVSLTVSREGAKEPLTFKVTLTDKLVPFESGFLGILPVRESKNQTTSGVGVRYVIPDSAAAKAGLKPKDQILEFNQQKVTSPEMLAFLVNHLRPGDAASLLISRDQKPVKLEVKLQKTPEAVPAELPTQAIPSRTAQENKAQKIKVGHYKE 463
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A518I7W5_9PLAN (Putative periplasmic serine endoprotease DegP-like n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I7W5_9PLAN) HSP 1 Score: 229 bits (584), Expect = 1.070e-68 Identity = 116/171 (67.84%), Postives = 144/171 (84.21%), Query Frame = 1
Query: 4 KPVGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENKTQNIKVGHYKE 516
KPV +HS+VK VLMS YAG++VSLTVTREG ++PLTFKATL EKLVPFESGFLGILP RE++ + GVGVR+V +SAA +AG+K KD+ILEFN+QKV SAE LA +VNHLRP + A+L +SRD+KP+ L+VKLQ TP+ V + +PTQA PSRTA+ENK QNIKVGH+K+
Sbjct: 293 KPVSMHSQVKQVLMSKYAGESVSLTVTREGVQKPLTFKATLDEKLVPFESGFLGILPQRESKTENGQGVGVRFVFSNSAAAEAGLKPKDQILEFNKQKVASAEALASMVNHLRPGETATLQVSRDQKPLALNVKLQTTPNTVESSLPTQARPSRTAEENKKQNIKVGHFKD 463
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A6C5I1_9PLAN (PDZ domain-containing protein n=11 Tax=Planctomycetaceae TaxID=126 RepID=A6C5I1_9PLAN) HSP 1 Score: 208 bits (529), Expect = 1.130e-60 Identity = 106/169 (62.72%), Postives = 131/169 (77.51%), Query Frame = 1
Query: 10 VGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENKTQNIKVGHYKE 516
V +HS+VK VLM+ YAGD+VSL VTREG+ +PL+FKAT+ EKLVPFESGF+GILP R + +Q GVG+R+V SAA +AG+K +DRILEFNQQKV+ A LA LVNHLRP + A +LISRD+K + VKLQ TP V +E+PTQA+PSRTA EN+ IK GH KE
Sbjct: 294 VAMHSQVKQVLMNKYAGDSVSLVVTREGSPDPLSFKATMVEKLVPFESGFMGILPQRASIDQVEAGVGIRFVFSKSAAAEAGLKPRDRILEFNQQKVSDASALALLVNHLRPGETAEMLISRDQKEQTVKVKLQSTPHTVESELPTQALPSRTAAENQKDKIKTGHLKE 462
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A3C0AGR4_9PLAN (PDZ domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AGR4_9PLAN) HSP 1 Score: 169 bits (428), Expect = 6.890e-50 Identity = 86/125 (68.80%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 10 VGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEK 384
V +HS+VK VLM+ YAGD VSL V REGA EPL+FKAT+ EKLVPFESGFLGILP R A NQ GVG+R++ SAAE+AG+K+ DRILEFNQQKV+ LA LVNHLRPE+ A LLISRD+K
Sbjct: 103 VAMHSQVKQVLMNKYAGDAVSLVVKREGAAEPLSFKATMVEKLVPFESGFLGILPQRTAINQVEAGVGIRFIFSKSAAEEAGLKSGDRILEFNQQKVSDPGALALLVNHLRPEETAELLISRDQK 227
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A517W1L3_9PLAN (Putative periplasmic serine endoprotease DegP-like n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W1L3_9PLAN) HSP 1 Score: 178 bits (452), Expect = 1.480e-49 Identity = 96/169 (56.80%), Postives = 123/169 (72.78%), Query Frame = 1
Query: 10 VGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENKTQNIKVGHYKE 516
V +HS+VK VLM+ YAG++VSLTVTR G+KEPLT KATL +KLVPFESGFLGILP RE + GV VRYV S A AG+K D+ILEFN+QKVT+++ LA +VNHLRP D A LL+ R+E+P+ + V LQ P V +P+Q + S+TA +NK K GH+K+
Sbjct: 296 VSMHSQVKHVLMNKYAGESVSLTVTRTGSKEPLTLKATLVKKLVPFESGFLGILPQREFNEPSERGVRVRYVFSKSPAALAGLKLNDQILEFNRQKVTNSKSLASMVNHLRPGDSAELLLLREEQPLIVKVTLQSIPHTVENTLPSQIVSSKTAPKNKPA-FKKGHFKD 463
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A3B1DW81_9ZZZZ (PDZ domain-containing protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DW81_9ZZZZ) HSP 1 Score: 113 bits (282), Expect = 5.860e-26 Identity = 64/160 (40.00%), Postives = 97/160 (60.62%), Query Frame = 1
Query: 4 KPVGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENK 483
K V ++V+ VL YAGD + +TV+R+G + +T K L + + PFE+GFLGILP+RE N +T VGVR+V P+S AEKAG+K KDRI FN K+ L+ +VN L PE + +L+ R + +++KL + +P ++ +P +E K
Sbjct: 228 KKVFRQADVRHVLGRKYAGDEIEMTVSRKGKQ--ITKKMVLVDVIRPFEAGFLGILPMREG-NTNSTSVGVRFVYPNSPAEKAGLKVKDRITTFNGTKIVDTTQLSQMVNKLSPEQKVTLVYRRGKSEKTIELKLGHISNEIPVDLRPVILPLSEDEEKK 384
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A2E7D431_9PLAN (PDZ domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D431_9PLAN) HSP 1 Score: 111 bits (278), Expect = 8.840e-26 Identity = 63/152 (41.45%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 4 KPVGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIP 459
K V ++V+ L S AGD V +TV RE E T L EKL+P+E+GFLG+LP R +Q + + GV VR++ DS AE AG+K +DRI F +Q + S + L V+ LRPE A+++ R++K +V L TP A+P+++ + IP
Sbjct: 297 KTVSRVAQVQQELGSHLAGDVVEVTVKREN--ESKTASVKLAEKLLPYEAGFLGVLPTRPSQTEESKGVIVRHIFKDSPAETAGLKKRDRITRFGEQDIKSLDDLYDAVSRLRPEQSATVVYLREDKENTAEVTLVTTPAAIPSDLSPEIIP 446
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A353Z7M9_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353Z7M9_9PLAN) HSP 1 Score: 107 bits (267), Expect = 6.980e-24 Identity = 68/170 (40.00%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 4 KPVGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQN-QTTTGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENKTQNIKVGHY 510
K V +++K VL + YAGDTV +TV R G E LT LT++LVP+E FLG+LPVR + G+GVRYV P+S A +AG++ D+I +T A+ +A V+ LRP D+ ++ I R E+ +L + TP VP +I P R QE N+K+G +
Sbjct: 303 KAVRSQAQMKHVLGNKYAGDTVKVTVERSG--ERLTRDLVLTDRLVPYELPFLGLLPVRAGSGAKDLVGLGVRYVYPESPASRAGIERGDQITALGGVAITQADAMADQVSRLRPGDKLAVTIKRGEETRELSITSGTTPVIVPVDIRPSPQPPRE-QELADPNLKLGRF 469
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: UPI0019958BB6 (PDZ domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019958BB6) HSP 1 Score: 107 bits (267), Expect = 7.060e-24 Identity = 66/161 (40.99%), Postives = 92/161 (57.14%), Query Frame = 1
Query: 22 SEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTTTG-------VGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENK 483
++VK VL GD +++T+ R E TL +L PFE+GFLG+LP REAQ TG VGVR+V PDS A K G+K +DRI++F Q +TSA L V+ +RP ++A +++ RD K L+ L P VP E+PT I + E+K
Sbjct: 298 AQVKHVLGGKIEGDKLAITIKR--GNETKQADLTLVGELPPFEAGFLGVLPTREAQKGQETGEKKQEPGVGVRWVYPDSPAAKIGLKPRDRIMKFRDQAITSAAQLIDQVSRVRPTEKAVVVVRRDGKEQTLEATLAGYPADVPKELPTSPIEAAADGESK 456
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Match: A0A3N5RQ89_9PLAN (PDZ domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5RQ89_9PLAN) HSP 1 Score: 98.6 bits (244), Expect = 6.180e-21 Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 4 KPVGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFESGFLGILPVREAQNQTT-TGVGVRYVIPDSAAEKAGVKAKDRILEFNQQKVTSAEMLAFLVNHLRPEDQASLLISRDEKPVKLDVKLQKTPDAVPAEIPTQAIPSRTAQENKTQNIKVGHYKE 516
KP+ ++++ VL S YAGD V+LTV R E LT + TL +KL+ +ES FLG+ PVR + TG+ RYV DS A +AG++ + I++F + V +A+MLA V+ +RP + L ++ + +++V L P VP +I P R +E +K+G + E
Sbjct: 115 KPIRAQAQMRHVLGSKYAGDKVTLTVER--GSERLTRELTLVDKLIAYESAFLGVSPVRHGAGEPPRTGITARYVYFDSPASRAGIERGNAIIKFGAEAVANADMLADRVSRIRPGETVKLTVAAAGQEREVEVVLGAMPSLVPVDIRPSPQPPRE-KELADATLKLGRFTE 283 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124443.4969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124443.4969.1 >prot_M-pyrifera_M_contig124443.4969.1 ID=prot_M-pyrifera_M_contig124443.4969.1|Name=mRNA_M-pyrifera_M_contig124443.4969.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp DKPVGLHSEVKSVLMSLYAGDTVSLTVTREGAKEPLTFKATLTEKLVPFEback to top mRNA from alignment at M-pyrifera_M_contig124443:2..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124443.4969.1 ID=mRNA_M-pyrifera_M_contig124443.4969.1|Name=mRNA_M-pyrifera_M_contig124443.4969.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig124443:2..517+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124443:2..517+ >mRNA_M-pyrifera_M_contig124443.4969.1 ID=mRNA_M-pyrifera_M_contig124443.4969.1|Name=mRNA_M-pyrifera_M_contig124443.4969.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig124443:2..517+ (Macrocystis pyrifera P11B4 male)back to top |