mRNA_M-pyrifera_M_contig1243.4950.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1243.4950.1
Unique NamemRNA_M-pyrifera_M_contig1243.4950.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: D7G584_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G584_ECTSI)

HSP 1 Score: 653 bits (1684), Expect = 1.460e-220
Identity = 443/658 (67.33%), Postives = 481/658 (73.10%), Query Frame = 1 
Query:    1 QDHGVLKICGRDAAVDYSITKDKFNALKQGANVNGSGAQAAPSGGAADSPXXXXXXXXXXXXXXXXMEVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAAGAERP------RAPDVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGATDPALARDSGGSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLEDSGAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIPPVTAASIVKTKIIRDMDKKPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSEQARSDGAAKGESSRLLVEFSVENHAKLKLQQSRKDAFDSRKRELKALGLGQDGRPLKKVEEGKEKKSRGKLQREKKKLRPESTGTGNDTDQLPASPAETPSKKKRKKPGAQAEAEGVTPNEGGVSRGQGTGVT--GDEETDGLVGGEGXXXXXXXXXXXXXXXXXXYERVDPQERAYQQLERAYTAKTEQAAAAKSGKPAASKGXXXXXXGREGEEAA--GXXGAVGGGGDAERKKGGEGRWFD 1938
            +DHGVLKI GRDAAVDYSITK+K++AL  G       A + P+   +D     XXXXXXXXXXXXX    XXXXXXXXXXX       XXXX      XXXX      DA AG ER       RAPDV HGCT+FVRNVAFD  QEEVKERF  FG VRLALLVKDRATGMPRGTAF  +S R +AD CLAAAIGATDPA ARDSGGSC+YLG+RALH+TRAVDRE+AGRLTVGAQKR GHKDKRNLYLADEGLVLEDSGAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSP RLSVRN+ RHVTDGKLKSMAA AAR+GIQAG A PQDVRLYLEAQGEEF+AITP+RL+IP VT  S+VK KIIRDMDKKP+ +D SELHPSKGYGFVEF+HHGQALAALRQMNNNPAYS QA+SDGAAKGESSRL+VEFSVENHAKLKLQQ RK+AF+ RKRELKALGLGQDGRPLKK +E KE KSRGK+QREK            ++ ++P   A T +                              V   GD ETDGLVGG G         XXXXXX   YER+D QERAYQ+LE+AYTAKTE AA            XXXXXX   G EA   G  GAV G  D  R+KG  GRWFD
Sbjct:  438 KDHGVLKIKGRDAAVDYSITKEKYSALNLG-------APSTPAAAGSDX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAGDSXXXXSEGEEDXXXXPKEGGPDAGAGVERAVERKQQRAPDVNHGCTIFVRNVAFDSSQEEVKERFSEFGDVRLALLVKDRATGMPRGTAFVKYSKRDDADRCLAAAIGATDPAHARDSGGSCIYLGSRALHVTRAVDREEAGRLTVGAQKRVGHKDKRNLYLADEGLVLEDSGAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSPTRLSVRNIGRHVTDGKLKSMAAAAARAGIQAGRANPQDVRLYLEAQGEEFAAITPKRLQIPAVTGNSVVKAKIIRDMDKKPSTDDPSELHPSKGYGFVEFSHHGQALAALRQMNNNPAYSGQAKSDGAAKGESSRLIVEFSVENHAKLKLQQGRKEAFEQRKRELKALGLGQDGRPLKKEDENKEMKSRGKIQREKXXXXX--XXXXXESGEVPDGQASTANTGSXXXXXXXXXXXXXXXXXXXXXXXXXDAVVDAGDAETDGLVGGRGTEGEDRPKRXXXXXXTSPYERMDQQERAYQKLEKAYTAKTEVAAXXXXXXXX----XXXXXXXXRGAEAVVEGGGGAVEG--DGARRKGKSGRWFD 1076
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A835ZCM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM5_9STRA)

HSP 1 Score: 355 bits (912), Expect = 2.390e-106
Identity = 275/506 (54.35%), Postives = 341/506 (67.39%), Query Frame = 1 
Query:    1 QDHGVLKICGRDAAVDYSITKDKFNALKQGANVNGSGAQAAPSGGAADSPXXXXXXXXXXXXXXXXMEVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAAGAER-PRAPDVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGATDPALARD---SGGSCVYLGTRALHITRAVDREQAGRLT-VGAQKRSGHKDKRNLYLADEGLVLEDSGAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIPPVTAASIVKTKIIRDMDK-----KPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSEQARSDGAAKGESSRLLVEFSVENHAKLKLQQSRKDAFDSRKRELKALGLGQDGRPL--KKVEEGKEKK--SRGKLQREKKKLRPESTG 1470
            ++HGV+KIC RD AVDY++ K +F     G  +N +              XXXXXXXXXXXXXXXX +   XXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXX       R P  PDV  G TVFVRNV FD  ++ ++E F  FG VRLALLVKD+ TGMPRGTAF  F+ R  AD CLA A G  D A   +   SGG+ +YLG RALH+ RAV+R++A RL   G   +S  KDKRNLYLA+EGL++    AA    K+DM+KR  AR DKK KLKNP+FF+SP+RLSVRNL+R VTD  L+ +AA AAR+G++   A+ +D+R  LEA GE+ + ITP RLKIPPV+ AS+V+ ++IR+ ++      P   D S L PSKGYGF+EF HHG ALAALR +NNNPAYS  A      KGE  RL+VEF+VENHAKLK+Q++RK   ++RKREL  LGL  DG  +  K  + G + K  SRG+ QR++K+   E  G
Sbjct:  449 REHGVMKICDRDVAVDYALAKKRFEETLAGQALNRTTDAXXXXXXXXXXXXXXXXXXXXXXXXXXXSDAGGXXXXXXXXXXXXXGSDAGXXXXXXXXXXXXXXXXXXXXXXXKPRRAPPRPDVGQGRTVFVRNVGFDATEDALRECFEDFGDVRLALLVKDKGTGMPRGTAFVKFTTREAADKCLAVAEGLEDGAEPINDILSGGNSIYLGGRALHVMRAVERDEAQRLGGKGPDGQSAKKDKRNLYLANEGLLIATEEAARETPKADMDKRAAARADKKQKLKNPLFFISPLRLSVRNLSRAVTDAALRKLAADAARAGLEQRRASAKDMRRQLEASGEDHATITPDRLKIPPVSQASVVRARVIRETERVGSSAAPPGGDLSAL-PSKGYGFMEFKHHGHALAALRTLNNNPAYSHHAHGGKMEKGEKPRLIVEFAVENHAKLKVQETRKAKQETRKRELATLGLRPDGTAMLSKGADAGGDAKKLSRGQRQRDRKRQLREQNG 953
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: W7T7L7_9STRA (Rna-binding protein 28 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7L7_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.460e-52
Identity = 135/331 (40.79%), Postives = 187/331 (56.50%), Query Frame = 1 
Query:  343 ERPRAPDVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAFFSNRG----EADLCLAAAIGATDPALARDSGGSCVYLGTRALHITRAVDREQAGRLTVG----AQKRSGHK---DKRNLYLADEGLVLEDSGAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIPPVTAASI-VKTKIIRDMDKKPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSEQARSDGAAKGESSRLLVEFSVENHAKL 1299
            + P + DV  G  +FVRN+ FD   E +K  F  +  V  A++VKD  TG+ +GTAF   +     E  L  AA  G T P L RD            + I RA++ + A +  V     A   SGHK   D+RNLYLA+EGL++  S A     K D+EKR   + +KK+KL+NP FFVSP RLS+RNL R V D +++++   A + GI A   TP D+ L+L+AQG    A+  + L +    +  I +K KI+RD+ K P     + + PS+GY F +F  H  ALAALR +NNNP +S  + + GAAK   SRL+V F+VENH  L
Sbjct:  449 KNPPSSDVNEGKAIFVRNIPFDATSESLKLAFHDYAPVAFAIIVKDSTTGLSKGTAFIKFKSKVGMETTLSAAACGGGTLPLLGRD------------VKIDRALETKDAPKAVVSDPVAADLSSGHKSKVDRRNLYLANEGLLI-GSEAQNEIPKGDIEKRQREQAEKKAKLRNPYFFVSPTRLSIRNLRRSVGDEEVRNLLVQAVQKGINAKQVTPDDLILHLKAQGLYEQALRHEDLSVFQPRSRDIHIKVKIMRDLSKTP----MNGVFPSRGYAFADFTSHIHALAALRHLNNNPTFSGFSITSGAAK--CSRLIVSFAVENHKAL 760
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A2D4BNT5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNT5_PYTIN)

HSP 1 Score: 199 bits (505), Expect = 4.640e-50
Identity = 149/379 (39.31%), Postives = 211/379 (55.67%), Query Frame = 1 
Query:  361 DVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGATDP-------------ALARDSGGSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLEDSGAAEGAA--KSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIPPVTAASIVKTKIIRDMDKKPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSE-QARSDGAAKGESSRLLVEFSVENHAKLKLQQSRKDAFDSRKRELKAL--GLGQDGRPLKKVEEGKEKKSRGKLQR 1437
            D Q   T+F+RN++F   +E +KE F  FG V  A +V D+A+G+ +G  F  F  R  AD+ +      T               +L+  + G  + L  R + +TRAV R+ A RLT     +   KDKRN+YLA EG +  +  + E  +  K D+EKR  A K+KK KLKNP++FVSP+RLSVRNLA HV D +LK +   AA +G+Q       D+R  ++ +    S   P ++K+           KI+RDMD   NV    E   S+GYGFVEFA H  ALAALR +NNNP Y+       G+A+ E SRL+VEF++EN  KLKL++ +++    ++ E KAL    G D +      +G +KKSRG+ QR
Sbjct: 1025 DEQRMRTLFIRNLSFQTTEESMKEFFATFGAVEYARIVVDKASGLSKGVGFVRFRQREPADVVMMRGQNDTTQNTKRKGKKPQDQFSLSAFADGDALMLDGRMIIVTRAVARDDAERLTESNSAQRKAKDKRNMYLAYEGTINVNKLSEEELSLPKMDIEKRRRAIKEKKEKLKNPLYFVSPLRLSVRNLASHVDDAQLKQLFREAAITGMQQXKV---DMRRXVKVELLPASERVPVKVKM----------AKIVRDMD---NVRPGKEPR-SRGYGFVEFAEHVHALAALRVVNNNPEYTSFTPGKGGSAEHEKSRLIVEFALENQGKLKLREKKQNDAKKKREEEKALKEAQGDDHKS-----QG-QKKSRGQRQR 1380
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A6G0W8R2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W8R2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 4.660e-48
Identity = 150/403 (37.22%), Postives = 216/403 (53.60%), Query Frame = 1 
Query:  325 DAAAGAERPRAP-DVQHGCTVFVRNVAFDCGQEEVKERFGA-FGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGAT-DPALARDSG------------GSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLEDSGAAEGAA--KSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGE-EFSAITPQRLKIPPVTAASIVKTKIIRDMDK-KPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSEQAR-----SDGAAKGESSRLLVEFSVENHAKLKLQQSRKDAFDSRKRELKALGLGQDGRPLKKVEEGKEKKSRGKLQREKKKLR 1455
            D    + +P+   + Q   TVF+RN++F   +E + E F   FG V  A +V D+ +G+ +G AF  F ++  AD  +A       DP   + +             G  +Y+  R L +TR+V ++ A RLT     +    DKRN+YLA EG +  +  A       K D+EKR  A K+KK KLKNP+FF+SPVRLSVRNLA  V +  LK++    A  G++ G    +DV+      GE +     P ++K+           KI+RD+D  KP      E   S+GYGFVEF+ H  ALAALR++NNNPAY++ +      + GA   + +RL++EF++ENH KLKL++ R +    R+ E K L   Q     +KVE    +KSRGK QRE K LR
Sbjct:  558 DEPKASSKPKVDTESQRERTVFIRNLSFQTSEEGLSEAFSTEFGPVEYARIVMDKGSGLSKGVAFVRFRSKEHADAAIARGTPKVEDPKKKKKNAAQDIFFSSAMLDGDGIYVDGRLLSVTRSVAKDDADRLTEENSAKRKAVDKRNMYLAYEGTINVNKTADTELELPKMDIEKRRRAIKEKKEKLKNPLFFISPVRLSVRNLALSVDEKTLKTVFREGAIEGLREGLVNMKDVK------GEYQLEKGVPVKIKL----------AKIVRDVDNVKPG-----EGPRSRGYGFVEFSQHVHALAALRKLNNNPAYTQYSGRGVKPARGAQDKDKTRLIIEFALENHGKLKLREKRMNDAKKRRDEDKMLRKAQGEEVPEKVE----RKSRGKRQREAKALR 935
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A7R9YDH0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDH0_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.560e-47
Identity = 139/374 (37.17%), Postives = 194/374 (51.87%), Query Frame = 1 
Query:  361 DVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAFF---SNRGEADLCLAAAIGATDPALARDSGGSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGH--KDKRNLYLADEGLVL-----EDSGAAE------GAAKSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIP---------PVTAASIVKTKIIRDMDKKPNVNDTSELHP---SKGYGFVEFAHHGQALAALRQMNNNP--AYSEQARSDGAAKGESS-----RLLVEFSVENHAKLKLQQSRKDAFDSRKRELKALGLGQDG 1377
            DV+ G T+FVRN+ FDC +E++KE F  F  V    LVKD  T + RG+AF    +  G  ++  AA +         D     + L  R L  + AV R +A  L+  + + +    KDKRNLYL DEG +L     +D  + E      G   SD +KR L+ ++ K KLKNP+FFV+  RLS+RNL   V D +L+ +A  AAR G+Q  SA  +D+R +L AQG    AI    L++             + ++   K++RDMD           HP   S+G+GFVEF  H  ALAALR +NNNP  AY + A+  G  K ++      RL+VEF VENH K++           R+RE    G  +DG
Sbjct:    3 DVREGLTIFVRNIPFDCTREQLKEAFEQFAEVATCALVKDPETNLLRGSAFVKMKNKEGVEEILAAAEV---------DELSDGISLNGRLLRCSLAVPRNEAKALSAESARTNASTGKDKRNLYLLDEGRMLAKGLDDDDKSLESESERIGMHPSDAKKRTLSHRENKQKLKNPLFFVNGRRLSIRNLDYDVDDSELRELADKAAREGLQKVSA--KDIRKHLTAQGRPPDAIRSDELQVSYWVEDQKSGKAQSNTVASVKVMRDMD-----------HPKKLSRGFGFVEFTSHVAALAALRMLNNNPNEAYVKYAQGKGRVKKKARGAHPPRLIVEFVVENHRKMQXXXXX-XXXXXRQRETAPKGPAKDG 353
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A7S2G517_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G517_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.350e-47
Identity = 128/334 (38.32%), Postives = 188/334 (56.29%), Query Frame = 1 
Query:  352 RAPDVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGATDPALARDSGGSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLEDS-GAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQ----GEEFSAITPQRLKIPPVTAASIVKTKIIRDMDKKPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSEQARSDGAAKGES----SRLLVEFSVENHAKLKLQQSRK 1320
            R+ DV  G TVFVR + F+  Q  V ERF  FG V    LV D  +G+PRGTAF  F  +  A  C+AA           + G +   LG R + +  A+ R+     +   Q++S  +D+RNLYL DEGL+L+ +   A    + D+ KR  A +DKK KLKNP+FF+S  RLSVRNL   V    L  +   AAR G++    TP++V+L  ++       + S   P++L+ P   +  +   K+++D+        T E  PS+G+GFVEF+ HG ALAALR++NNNP Y+E A     A+ +      R++VEF+VE+  K+KLQ++R+
Sbjct:  421 RSGDVAKGVTVFVRGLPFEATQSAVTERFKEFGPVNRVSLVLDPHSGLPRGTAFVNFQEQDSAKGCIAAF----------NKGQALNVLG-RPVEVLEAMGRDDV--TSSVQQRKSVKRDRRNLYLKDEGLILDGAEDYAHTVPEGDLRKRRDAHEDKKRKLKNPLFFISATRLSVRNLDGDVDTALLGKIFNDAARKGVERNLVTPEEVQLQEDSHESDPNHQKSTTRPEKLRDP--KSVKLAGAKVMQDL--------TKENSPSRGFGFVEFSEHGHALAALREVNNNPKYTEFALRGKQAREKDVKLRPRIIVEFAVEDRGKMKLQETRR 731
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A5D6Y1I0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1I0_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.210e-46
Identity = 140/379 (36.94%), Postives = 191/379 (50.40%), Query Frame = 1 
Query:  325 DAAAGAERPRAPDVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGATDPA------------------LARDSGGSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLEDSGAAEGAA--KSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIPPVTAASIVKTKIIRDMDKKPNVNDTSELHPSK-----GYGFVEFAHHGQALAALRQMNNNPAYSE-----QARSDGAAKGES--SRLLVEFSVENHAKLKLQQSRKDAFDSRKRELKAL 1359
            DA    E     D Q   T+F+RN++F   +E +K  F  FG V  A +V D  +G+ +G  F  F +   AD  LA    A +P                   L+  + G  + L  R L +TRAV +  A RL          KDKRN+YLA EG +  +  +AE  A    D+EKR  A ++KK KLKNP++FVSPVRLSVRNL+  V D KLK +    A +G++ G     +V+  L           P+R   P      +   K++RD +             SK     GYGFVEFA H  ALAALR++NNNPA++      +A   G A  ES  SRL+VEF++ENH KLKL++ R+   D R+ E +AL
Sbjct:  511 DAIKSGEPKSDTDAQRYRTLFLRNLSFQTSEEGLKAFFATFGAVEYARVVYDHGSGLSKGVGFVRFKDAAVADSVLARGQLAEEPTPSSGRKQXXXXXXENAFTLSALADGDALVLDGRMLSLTRAVAKADAERLAAENSSARKQKDKRNMYLAYEGTINVNKLSAEELALPAMDVEKRRRAIREKKEKLKNPLYFVSPVRLSVRNLSAAVDDKKLKEVFRDGAAAGVREGVVDRAEVKTEL----------LPKRAAAP----VKVKMAKVVRDTEAAKAAGGVGAAGASKEPRSRGYGFVEFAEHVHALAALRKLNNNPAFAHLAAGAKADKKGGALAESARSRLIVEFALENHGKLKLREKRRADADKRRAEERAL 875
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A8K1CP94_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP94_PYTOL)

HSP 1 Score: 184 bits (467), Expect = 2.100e-45
Identity = 133/353 (37.68%), Postives = 192/353 (54.39%), Query Frame = 1 
Query:  361 DVQHGCTVFVRNVAFDCGQEEVKERFGAFGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGAT------------------DP-ALARDSGGSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLEDSGAAE--GAAKSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIPPVTAASIVKTKIIRDMDKKPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSEQARSDGAA-----KGES------SRLLVEFSVENHAKLKLQQSR 1317
            D Q   T+F+RN++F   +E +++ F  +G V  A +V D+ +G+ +G AF  F  R  ADL +  +  A                   DP AL+  + G  + L  R L ++R+V+++ A RLT         +DKRN+YLA EG +  +  + E  G  K D+EKR  A ++KK KLKNP+ FVSPVRLSVRNLA  V D +LK +   AA +GI+ G    +DV+       +    +TP     P      +   K++RDM+   NV    E   S+GYGFVEF  H  ALAALR +NNNP +++ A    AA     +G+S      SRL+VEF++ENH KLKL++ +
Sbjct:  489 DEQRARTIFLRNLSFQSTEEGLRDFFATYGPVEYARIVYDKGSGLSKGVAFVRFKQREVADLVIERSQSALARQEXXXXXXXXXXXXXEDPFALSALADGDALMLDGRMLLVSRSVNKDDADRLTEANSADRKKRDKRNMYLAYEGTISVNKLSEEELGLPKLDIEKRRRAIREKKEKLKNPLIFVSPVRLSVRNLATSVDDKQLKQIFRDAAATGIKEGKVIMKDVK------SDFVPTVTP-----PEKAQVKVKMAKVVRDME---NVKPGKEPR-SRGYGFVEFTEHIHALAALRVLNNNPQFTKVAAGGAAAAAKVKQGKSLADEDKSRLIVEFALENHGKLKLREKK 826
[Close]
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Match: A0A067CLD4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLD4_SAPPC)

HSP 1 Score: 184 bits (466), Expect = 2.980e-45
Identity = 149/399 (37.34%), Postives = 215/399 (53.88%), Query Frame = 1 
Query:  340 AERPRAP-DVQHGCTVFVRNVAFDCGQEEVKERFGA-FGTVRLALLVKDRATGMPRGTAF--FSNRGEADLCLAAAIGATDP------------ALARDSG---GSCVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLEDSGAAEGAA--KSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDGKLKSMAATAARSGIQAGSATPQDVRL-YLEAQGEEFSAITPQRLKIPPVTAASIVKTKIIRDMDKKPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNNNPAYSEQAR-----SDGAAKGESSRLLVEFSVENHAKLKLQQSRKDAFDSRKRELKALGLGQDGRPLKKVEEGKEKKSRGKLQREKKKLR 1455
            ++RP+   + Q   TVF+RN++F   +  +KE   + FG V  A +V D + G+ +G AF  F ++  AD  +A      D              L  D+    G  VY+  R L ITRAV+++ A RL          KDKRN+YLA EG +  +  A E     K D+EKR  A K+KK KLKNP+FF+SPVRLSVRNLA  V +  LK++    A +G++A     ++V+  Y+   G       P ++++           KI+RDMD   N+    E   S+GYGFV+F+HH  ALAALRQ+NNNP Y+E +             E +RL++EF++ENH KLKL++ + +    R+ E   L   Q G  ++KVE    +KSRGK QRE K ++
Sbjct:  529 SKRPKGDSEAQMLRTVFIRNLSFQTTELFLKESMESEFGPVEYARVVMDHSAGLSKGVAFVRFRSQDAADAAIARGTVKDDSKDKKKNKSSVSGGLFYDNALLDGDGVYVDNRLLSITRAVNKDDATRLADENSATRKAKDKRNMYLAYEGTISVNKTADEDLELPKMDIEKRRRAIKEKKEKLKNPLFFISPVRLSVRNLALGVDEKILKTIFREGAIAGLRANLVDMKEVKPEYVLKSG------APVKIEL----------CKIVRDMD---NIKPGQEPR-SRGYGFVQFSHHVHALAALRQLNNNPTYTEYSGRGVKLGKSTPDAEKTRLIIEFALENHGKLKLREKKMNDAKKRRTEDNMLRKAQ-GEVVEKVE----RKSRGKRQREAKAIK 902
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1243.4950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G584_ECTSI1.460e-22067.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCM5_9STRA2.390e-10654.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7T7L7_9STRA3.460e-5240.79Rna-binding protein 28 n=1 Tax=Nannochloropsis gad... [more]
A0A2D4BNT5_PYTIN4.640e-5039.31Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A6G0W8R2_9STRA4.660e-4837.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7R9YDH0_9STRA2.560e-4737.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2G517_9STRA3.350e-4738.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A5D6Y1I0_9STRA2.210e-4636.94Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CP94_PYTOL2.100e-4537.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CLD4_SAPPC2.980e-4537.34Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1243contigM-pyrifera_M_contig1243:273..9618 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score663.7
Seed ortholog evalue8.8e-188
Seed eggNOG ortholog2880.D7G584
KEGG koko:K14573
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006366,GO:0006396,GO:0006397,GO:0006401,GO:0006417,GO:0006725,GO:0006807,GO:0007623,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009299,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0010638,GO:0016070,GO:0016071,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032268,GO:0032270,GO:0032501,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0042162,GO:0042752,GO:0042789,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043487,GO:0043488,GO:0043565,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045893,GO:0045935,GO:0046483,GO:0046700,GO:0048511,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051972,GO:0051973,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097167,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1904353,GO:1904355,GO:1905661,GO:1905663,GO:1990904,GO:2000112,GO:2000278,GO:2000573,GO:2001141,GO:2001252
EggNOG free text desc.RNA processing
EggNOG OGsKOG0127@1,KOG0127@2759
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-14_006590.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons8
Model size1941
Cds size1941
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1243.4950.1prot_M-pyrifera_M_contig1243.4950.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1243 273..9618 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815760.5887995-CDS-M-pyrifera_M_contig1243:272..7851622815760.5887995-CDS-M-pyrifera_M_contig1243:272..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 273..785 +
1692277556.615156-CDS-M-pyrifera_M_contig1243:272..7851692277556.615156-CDS-M-pyrifera_M_contig1243:272..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 273..785 +
1622815760.6040576-CDS-M-pyrifera_M_contig1243:1956..21001622815760.6040576-CDS-M-pyrifera_M_contig1243:1956..2100Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 1957..2100 +
1692277556.6253638-CDS-M-pyrifera_M_contig1243:1956..21001692277556.6253638-CDS-M-pyrifera_M_contig1243:1956..2100Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 1957..2100 +
1622815760.6161819-CDS-M-pyrifera_M_contig1243:3133..34691622815760.6161819-CDS-M-pyrifera_M_contig1243:3133..3469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 3134..3469 +
1692277556.641757-CDS-M-pyrifera_M_contig1243:3133..34691692277556.641757-CDS-M-pyrifera_M_contig1243:3133..3469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 3134..3469 +
1622815760.6283982-CDS-M-pyrifera_M_contig1243:4770..48841622815760.6283982-CDS-M-pyrifera_M_contig1243:4770..4884Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 4771..4884 +
1692277556.652538-CDS-M-pyrifera_M_contig1243:4770..48841692277556.652538-CDS-M-pyrifera_M_contig1243:4770..4884Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 4771..4884 +
1622815760.6387377-CDS-M-pyrifera_M_contig1243:5766..59701622815760.6387377-CDS-M-pyrifera_M_contig1243:5766..5970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 5767..5970 +
1692277556.6620488-CDS-M-pyrifera_M_contig1243:5766..59701692277556.6620488-CDS-M-pyrifera_M_contig1243:5766..5970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 5767..5970 +
1622815760.6508074-CDS-M-pyrifera_M_contig1243:7252..73691622815760.6508074-CDS-M-pyrifera_M_contig1243:7252..7369Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 7253..7369 +
1692277556.6713142-CDS-M-pyrifera_M_contig1243:7252..73691692277556.6713142-CDS-M-pyrifera_M_contig1243:7252..7369Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 7253..7369 +
1622815760.6653044-CDS-M-pyrifera_M_contig1243:8114..83871622815760.6653044-CDS-M-pyrifera_M_contig1243:8114..8387Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 8115..8387 +
1692277556.6795187-CDS-M-pyrifera_M_contig1243:8114..83871692277556.6795187-CDS-M-pyrifera_M_contig1243:8114..8387Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 8115..8387 +
1622815760.6803904-CDS-M-pyrifera_M_contig1243:9378..96181622815760.6803904-CDS-M-pyrifera_M_contig1243:9378..9618Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 9379..9618 +
1692277556.6885662-CDS-M-pyrifera_M_contig1243:9378..96181692277556.6885662-CDS-M-pyrifera_M_contig1243:9378..9618Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1243 9379..9618 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1243.4950.1

>prot_M-pyrifera_M_contig1243.4950.1 ID=prot_M-pyrifera_M_contig1243.4950.1|Name=mRNA_M-pyrifera_M_contig1243.4950.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=647bp
QDHGVLKICGRDAAVDYSITKDKFNALKQGANVNGSGAQAAPSGGAADSP
DESDEEQEKEQEGGDGMEVDSDDPEEDDEFSDDDDDGSEQEGDDGVDDDD
DGEEEGGADAAAGAERPRAPDVQHGCTVFVRNVAFDCGQEEVKERFGAFG
TVRLALLVKDRATGMPRGTAFFSNRGEADLCLAAAIGATDPALARDSGGS
CVYLGTRALHITRAVDREQAGRLTVGAQKRSGHKDKRNLYLADEGLVLED
SGAAEGAAKSDMEKRVLARKDKKSKLKNPIFFVSPVRLSVRNLARHVTDG
KLKSMAATAARSGIQAGSATPQDVRLYLEAQGEEFSAITPQRLKIPPVTA
ASIVKTKIIRDMDKKPNVNDTSELHPSKGYGFVEFAHHGQALAALRQMNN
NPAYSEQARSDGAAKGESSRLLVEFSVENHAKLKLQQSRKDAFDSRKREL
KALGLGQDGRPLKKVEEGKEKKSRGKLQREKKKLRPESTGTGNDTDQLPA
SPAETPSKKKRKKPGAQAEAEGVTPNEGGVSRGQGTGVTGDEETDGLVGG
EGTEGEERPKRKKKSNKTSKYERVDPQERAYQQLERAYTAKTEQAAAAKS
GKPAASKGKGKRKRGREGEEAAGEGGAVGGGGDAERKKGGEGRWFD*
back to top

mRNA from alignment at M-pyrifera_M_contig1243:273..9618+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1243.4950.1 ID=mRNA_M-pyrifera_M_contig1243.4950.1|Name=mRNA_M-pyrifera_M_contig1243.4950.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9346bp|location=Sequence derived from alignment at M-pyrifera_M_contig1243:273..9618+ (Macrocystis pyrifera P11B4 male)
CAGGACCACGGAGTCCTAAAGATCTGCGGGCGCGACGCTGCGGTGGACTA
CTCGATCACCAAAGACAAGTTCAACGCCCTCAAGCAAGGCGCCAACGTGA
ACGGCTCGGGCGCTCAAGCAGCTCCTTCTGGGGGGGCGGCCGACAGCCCC
GACGAGAGCGACGAAGAACAAGAAAAAGAACAAGAGGGTGGCGACGGAAT
GGAGGTCGATTCCGATGACCCTGAGGAAGATGATGAGTTTTCGGACGACG
ACGACGACGGCAGCGAACAGGAGGGCGACGACGGCGTTGATGATGATGAT
GATGGCGAGGAGGAGGGAGGAGCAGACGCCGCGGCGGGGGCGGAGCGGCC
ACGGGCCCCGGATGTCCAGCACGGGTGCACGGTTTTCGTGAGGAACGTTG
CGTTCGACTGCGGACAGGAGGAGGTCAAGGAGAGGTTCGGCGCCTTCGGG
ACCGTGCGGCTGGCGCTGCTCGTGAAGGACCGCGCCACCGGGATGCCCAG
GGGGACGGCGTTCGTCAAGGCAAGGGGGGCTGGGCACTGCTGTTGTATCG
TATGATAAGGTTGCGTCGTAACGTTTGGCGGGAAATGGTGCGCCGTGGAA
TCGACCCTACGACCCCCGTGTTTTGTGTTGTTCTGCGAGATGCGTGCGCT
GACCTCACCTATCCCCTTTGCGGTAGTATTCCAGCTCCGCTTAGGGGGAA
AACCACTTGGAAATTAAGCGGGATCATTTCTGCACTACTACCGGGGAACA
TATTAATAGTAATAGATATTAATAGCAATAGATAGTAATCAGTATTACTC
GTAAGTATGGTGTGTCGACATAGGGGGATACACGGTTTTAGGGTCCATCG
TGGGTTCTGATTACTATGTATCACTATGTATTACTATGTAGTACATATTA
TTACTATGTATTACTCTATATTACTATGGTCCTCCATAAAAGCTGTTATT
ACCACTCTGGACGGAAATGTAAGCATCCTTGGTGTTCAAATATCGGTACC
TAACTATTGATAGTATCTAGCGCTCCTCGCATTTTCAACCGGACTGGAAA
GCAGGGTTAACTAGCGCAACAAACAGTACCTGCCAGTTTCAACCTGGCGC
GTTGTTTTCGTGACGCGCGTGCCTATTGGTCGGTGCGGCCTTGGCAAAAA
CCGACCCTTTATGAGCGACGGATCATGCTTGCTAGGCAACGATGGGCGGT
TCCTCTCCAATAGCCGAATGTTTGGGGAGGAATATCGGTAGAGTTACGTT
GACTTAAGTTCTCCGAATTCGGGCGGGAACGTATATCCCAGTCATCGTAC
CTCGTACTTATACGCTAATACCAACAATCCTGTTGCTTCCGTCCCTCCCT
TGTTTGTTTGTCTTACAAGTATCGTCAGCTTTGAGTTCGACCTTTTTTTT
TTCAAGGTTCAAGCGCTTTAGGCTCGCACCCAGGTTTTTTGGGACAAACG
ACTTGAAATAACAGTGCGGGATGTTTTCTGCAGTACATAGTAGGGGAGGT
TCAACACACACTTTTTTCTTTTCTTTTTTGCCGTTTCCCCGCTTTTTATG
CGGCTTAGACGTACAATACATGTACCGACTCGGGTATCCCTACCGATTGC
TGCGTCGCACTTTTCCAACCGAGTTATTTTGTCGGTGTTTTTGTTTCTGT
TTTGGCCGTTTTCCTACCGATTGCCGCGTCGCAGTTTTCCAACCGAGGCG
AGGCCGACCTCTGCCTGGCAGCCGCGATAGGCGCGACCGATCCCGCCCTC
GCACGCGACTCTGGGGGGTCGTGCGTCTACCTCGGGACCCGTGCGTTGCA
CATCACTCGCGCCGTCGACCGAGAGCAGGTGAGATGGGAGGTATGTTTGC
ACTCCAAGAGTCTTTTTTGAGCCTGTGCTGTGACAACGGGCTAGATTTTT
TGGCGACGAGTTCATGTGAGAACAACACAGCAAGAACAGCAGGTGAGAGT
TGGCGCTAGCTTTCTGACTGCAGAAGGTGGTACTGCAGTGATTTACCAGT
CTGCTAAAACCGCTGAGGGCTGTACAATGGTTGAAATAGACCTGAGCCCG
GCTTTGTCAAGATGACTGAAATATACCTGACTGCTGTATACACCAACTTG
ATACATATATGTTAACCCTATATCCCCGACCGCCCGAGAAATTTCTCGGA
ATGTTTGGAGATGGTTGGTCGATGTAATGAGGAGTTAGTGTGAACTTTAT
CAACCTTTTTGTCCAAGTCGGGCCAAAACCGTGAATAAATATAGTAGTGG
TCCCTCTAAACTGCCTGTGAAATCGCTTGGCGGAGGTGGGATCAACCATT
GTAGCAGTGTGCGGAATAGTGCCGATTGCCGATATGGTGCCGGTATTGTT
GCTTGGCGCATCTACACCGGCACTATAGAGGGACCATTACCGTACCGAAA
CCGCCCGTAACAACTGCACGGTCCGTACAGGCTGTGCGCCGCTTGAAACG
AAACCAGCTGTCCGTGGGTGGGTACATGTATGTACACACCGTCAGCGCCG
CGGTCCAGTAGTCGTGCGAAAAAACCGCCGCGCTGGCGTTCCCTCCGGCT
TGCTTTCGTCGTTGCAACGGGTACCTCTACGGTATGAGACGGTGACGGCA
CTGTACAGTACGGTTACGATACGGTACTGCGGTTGCGGTACGATATGTAT
GATGAGGAACGCGACCCAGTTCGAGACGGGCAAGTACGATTCAGTTTTGG
TGCGGTTATGGTACAATACGATACGGTGCAGAGAACGGTTACGGTACAAT
ACGGTACGGTTGCCCGATTTTTTACCATCTTGAGACGCTTTGACCGTCCC
CTATCCCCGCACCCCGTTTTTCTGACTGCCTCCTCCCGCGTTTCCTTCCC
CACCCTTTCAGGCCGGGCGTCTAACCGTGGGCGCGCAGAAACGATCGGGC
CACAAGGATAAGCGCAACCTGTACCTTGCCGACGAGGGCCTCGTCTTGGA
GGACAGCGGCGCGGCGGAGGGCGCGGCGAAGTCGGACATGGAGAAGCGCG
TGCTCGCCCGCAAGGACAAGAAGAGCAAGCTGAAGAACCCCATCTTCTTC
GTCAGCCCCGTGCGTCTGAGCGTGCGCAACCTTGCCCGCCACGTTACCGA
CGGCAAGCTCAAGTCCATGGCGGCCACCGCGGCGAGGAGCGGGATTCAGG
CCGGCAGCGCGACCCCCCAGGACGTCCGCCTCTACCTCGAAGCTCAGGTG
AGGACCCGACAAACGACAATCTAGAAGACGCGCTTTTTGCGAGAGCTGGG
TGGGCCAAGCCGCCTTGTCACAGCACGCCCACCTGCTCCCTTGCTCACTC
GCTCGTGCCCTGCCGTGCGGTGCCTTGCGGTGTTGTACAGTCGTTGCGGT
CGTGTGGTTGCTTACCACCGCCTCCCCCCTTTCCAGGTCGCGTCACGCAC
CATCGCGCGAGAATGGAACCCTTTTTGTTTTTTGGTTGTTGTTTCGCCAA
TCTGTTGGGTGGGTGTACTGCGCAACCTTTACCTGGACAGGGTAATGGCG
GAAGCGGCGCGGTGGTTAATAATCCGGTCTACGGGTCTCGGCACAGGGGG
GGGGCGTCTGGAGCCCGAGGGCGCGCGTGCGTCGGTCGCGTCGTGTCCTG
TTTTGAGGGTATCGTTGCCCGTTACCGGTTATCTTGCCCTTGCCAGCGTG
CGATAGGGTGCTGCGCGGCAGTGGCGGCATCTTACCTACCAGCCGCTCGA
CCGGCAATATATTCTCGCGATAAAATTAGCTGCGGTGGCGCTGTTCCCTC
GTTAATAGATGATGTATCATGATGAACTACTGCTGTTGCGCCGGGTGTGC
TCGTCCGCTCGTCCCTTGGTGGTTTGACAAAAGCCTGAGCAAAACGGAGG
GTGGGTGTCCTGGGGCGGGGGACGGACGGATCGTGATTGGTGATGCCGGT
GTGTGTGGGAATAAAGGAGTTATGGTACTATTATAGTTACAGCAGTACCA
GGGCTGTCCACGGGTCGGGTCAAACCTCGCGGCTCACTCAGATCGGGTCG
GGTAAGGGTGACCAGACCTGATCCGTGAGAGCTTCAAGACCTCCTGACCC
GACGGACGCGTGATATTTCAAGAACTTCCTGACCCGACCCGCGGGGGGGG
TCGGTTCATGACCCGTGAAGAGGCCCGAATACTGGTAGCACAGCCCCCCG
CGACCTGCCACTGAGAGCGTCACGACAAGGCCCTGGTGGGCTCCTGTTGA
CCCCTCCCGTTTACGACTGCAAAACACCCACAATTTTTTGGGAAACATTA
CTTGGAAGTAGTGTTGGCTCATTATCGCAGTGACTTAGCACTCTGGAGAC
GGAGATGTAACGATCGTTGAGGTGTGAACATCAAGTCCAAACTGTCCTTA
CCAAAGTCTGTCCGCGGTGGCAAGGGTTAGGGTTAGTAGCGGGGGTCTCA
CAACAGCAAAATTCTCTTGCAATTGTTTTATTTTCTCCTTTTTCAAAGAA
AAAAAATGTATATGTCTGGTTTTGTTTTTTTTATTTTTATTTCGGCAGGG
GGAAGAGTTTTCGGCCATCACTCCTCAGCGGCTGAAAATCCCCCCGGTGA
CGGCGGCCTCCATCGTCAAGACCAAGATCATCCGGGACATGGACAAGAAG
CCAAACGTGAATGTGAGGAGCCTTCTCGTTTTGACGGAGTAGCCGGGTTC
GCTGCTCCATCCCTGGTGAATATCGAGGGTCGCGTAGGCCGCGAGGTCTA
TGGCAAAACTACTGCGTGCGTACTTGATGCCACTACTGTACCGTATTGCT
GCGACAGTGTTCCGTCTTTTTTTTGTTGGTCACCGCTTTTACTTTAGCTC
TGCCAGGTGACTTATTGGACAAGACTTGTGTGATAGAACTGCGATGATAC
CGCTGTGATTCGTTTTTTGTGTTTTATCGTCACTTAGTGACTTTCATAAT
CAGTTCGCTGGAGCTTAACCCCTTTAGTCCTCTAGAAGCCATGTAGGCCT
TCAAGACTGCTCTCCCGTAGTGTCGACATGTTGTATTAATAGTATTAATA
GTTCAAATCAGACTAATATTTAGTTGAAGGCTTAACGCTCAGCGACTTTC
TGGACACGGCGTGGTCACAGGCGCCTCCCCTTCCCCCCCCCCCGTGGTAC
ATACTATTACGGGGGTCCATAGTTAATAGGACCTATGGTGTACATAAAAA
CCTATATATTTACCTATTTTTTCTAACAATATTTGGTCCTATTTACTATG
GTCCTCCGTAATAATGTCGTTTGGTTTGCTAAGGTCAATTGGTTTACGCG
TGAAGTCGAACCGATTCTACCACTTCGCAACAAAAAGGGCACGAGATCTG
CCAGCCAGCGTTAAAAGCATGTCAACACTCCGCCGCTTTCCTCTCCTCAT
ACTATTAATAAGTACGATCTCACCCTTTCTTACAGCCTCCGCTTACCGTG
TCCCTGCTCCTCCCTCCCAACCCCTCTCGCCTCCTCCCTCGTCCCCCTCC
GGTACTGTCTGCGACGAAAAAACACGCCTGCGAATCCCATGCAGGACACG
TCCGAGTTGCATCCGAGCAAGGGCTATGGCTTCGTGGAGTTTGCACACCA
CGGACAGGCGTTGGCGGCGCTTCGCCAGATGAACAACAACCCCGCTTACT
CCGAGCAAGCAAGGTCGGACGGGGCGGCGAAGGGGGAGAGCTCAAGGCTA
CTCGTAGAGTTTAGCGTCGAAAACCACGCCAAGCTCAAGCTCCAACAGGT
GCGAACGTTTCGCTTTTATTCGGTTGAGTTTGGTTCTTGTACAAGTGTGT
CTGGCGGCGTCTACAGTAGCGCCGCACGGAATGCTGTGTGTTGTTCAATT
TTGGTTATCTTGCTTAATCTTTTTACAATTTTGTTTAATTTGGTTTTTTT
TTTAAGGCCTATCGCCGCCCGTGTCCTGACTGTTTTCGCAGTAGGGATGA
AAGCGGTGGTGTTTGGCATTTCAGTCTTGCGCCAAGACTCATAGAGCTGC
ATGGCCGTTGAATCAAGTGTGTGTTTAGCCAGTACGTGTACGTACGTCCC
ACAGGTCTACCTGCACTTTCATTTTTTTTTTTTTTGTAGAACAATCAAGA
AACGATGGGGTGGCCCTTTCTGTTGTTCGCAGTTGGCTCGACTGACAGCA
CTGGAGTACGAGTAGCTCTGTAGGTAATAGTAAACTGCAGTACACCCAAC
CAGTTAGAGTGCGGCATCATATTGTCGGTGACTTTGAGCCAGACTCCACC
ATCAGGCACGGAACATACAACGTATCTTGTTACTGGGATGTATAGCTGGC
ATCCCTGAGGTTGTTGCTGGTGTGTACTTCGTACAGTGCTGGCATCTATG
AGGGTGCAGAATGCGTGGCGAGCGTATGGGATGTAGGATGCACGTGGAAT
GCTCATAATAGAGCCAAAATTGCCGGCTTTTGTTGCGACAAATTCGCGGT
GCAAGGTTTGCTGCCCTTCACAGCAGTAAACCGTGAGTTCTGCTCGTCAA
AGGCATCCGGCACACCCCGTCGCCTCTACAGTACCTTGATATACCATGTA
GGGTTGCGACGCACTTTGTATTGTGTATGTGCTGTCCCGATGCACTCTCT
GCTGTGTCTTGTGTGTTGTCTGAGTGCACTCTGCTGTGCTGTGTGTGCTG
TCTCGATGACACACTCTCGTGTTGTGTGTGCTATCTTTCAACGCTTTCTA
CTGGCGAAAGACAGCCAATACAGGGTCCGCACTGATTTTTCTTGTTAATA
GGCTATTAATAGACCGATATACATATTATACAGACCACGAAACAGAGACG
TATGTGTAATAGTGTATGTATAATAGTGTACTTTCATCCCTATAATAATA
TACTTTGTACATAGACTACCGTGTGCATCGCGAAATAACAAGATATTATC
ATTGGCAGTAAGACCAAGTATGTACCAGCGTCAATACACATCCGTTTTGT
ACAAGGTGAACGTCAATAGTGCAATCGTGTGCTCTGTTTTTCGTACGTTT
TGTCTTGCTGTTGCTATTCGTTGCGAACAGAGCCGCAAGGATGCCTTCGA
TTCGCGCAAGCGAGAGCTGAAAGCGCTCGGACTCGGGCAGGACGGCCGGC
CGTTGAAGAAAGTCGAGGAGGGCAAGGAAAAAAAGAGCCGCGGAAAAGTG
AGGGCATCTTTCATCAGCCATTTTCGTCAACTTTACCCTTTTGTCATCAA
TCTCAACCTTTTTTCATCAGCCAGTCTCGTCAATACTTTTCATCAGCCTG
TTGGTCGTCAACCATCGTCACCAGCTATCCACTTTTTTCATCAACCATGG
TAATGAGCCTTTTGGTGTCAATCATCGTGATCAACATTTGCCGTCGGCCT
TTGTGTCGTCAACTGCCGTCATCAAGATTTTGTCATCAACCTTTTTTTCA
TTCGCGGAGTTCGCCATGACAGCAGTTTCTCTCGCGATACGAAAATGCTG
TATGCCGTGCGCAGCGCGCTTCCTGCGCCTAGTTTGGTTTGCCTCGGCTT
GGCGCAAGTTTGGTTCTGGCCTTTTTTGGCGAATTTGGTTTATAAACGCG
ACCGGCCATTGTAGTAAGATTTACTGATTATTCGTCGTCTGGGACGCTTT
TTGGAAGTCGGAGTGGTCGGTCTCTATGTAAACAGAGGCGTTTCTTGTCG
AGTTTGGAAGCGTCTCTCTTGCGTGCTGTTCTTGTCGTTTCCGCTTGATT
TCGTGCCATGCCAATCATACAACTCGTATGTACCAGGTACAAATTATGCT
AATCATACAAGTCTTACAAGCCATACAAGGCATCCTACACAAAAATGCAG
GCAAGAACGTGCTTGACCCGTGCTCGTCCTGCCGCTGCTATTTGTTGTTG
CTACTACTGCTGCCTCTTGAACCCCCTCTTTTTTTTCTTCAGCTCCAGCG
CGAGAAGAAAAAACTGCGGCCCGAGTCAACGGGCACCGGCAACGACACCG
ACCAACTACCCGCAAGCCCAGCCGAGACACCGTCCAAAAAAAAGCGAAAA
AAACCGGGCGCTCAAGCCGAGGCCGAGGGTGTCACTCCCAACGAGGGAGG
CGTTTCGCGGGGGCAGGGGACAGGAGTCACGGGAGACGAGGAAACCGACG
GGCTTGTGGGAGGGGAGGGGACGGAGGGAGAGGAACGGCCAAAGCGCAAG
AAGAAGAGCAACAAGGTACGTCGAGGGATGCTGCTTCTCTCCGCTGGAGC
GCTCGTTCCGCCTGCTCGCGCGTGCAGTAGGCGGTGACTGGGCTGACTGT
TGGCGGTTGTAGTGAATGCCGTGCTTTGGTCTGTTCTCTTCGGCTTTTTT
TTTTTTTGCGTGCTCATGTATCACGAGGCCAGGTATGTATTCATAGCAGG
TTTCTGTTGTATCATGTACAGTGTGCATGCCTGGTGTGGCGCATCCTCGG
GAGATGTTGGTACGTCTTCTCACGGGCAGGGAGAGCTTGTGTCCGGCTGG
GGCTGAACGTAGCCTGTCTGTTTCTGCTCGTTTCAAGCTTGCTTCATGCA
TCTGGCGTGCATCGTTGGTTCATGTTTGTTTTGCCCTCCGACTATGTGTT
GTATATGTTCTGCTGTGAACCCGACTTGTATCGAATGTTCTCTAATACGG
CAGTGGTAGTCCCTTTTGTATCACTGAACTTTGGGTGCATACATGGGGGG
AATTTTAGGGCTGTCGCGTTGCCTCCGCCTGAACGACTTGATGCTTGTTG
CCCGATAGGGGCCGAAAGTTGCTGCTGTGCACCGATACTGTTTATCCGAA
AGAGAACCTAAAGCCTAGAAAGATTCAGAATATATGTCTATGTGCGCGGT
AGTTCGCTGGCTCCGTGTGGTCGTAAGGGGCGCGCGGGCCACGGAAGCCA
CGGTAATGACTAACACCGAACATGTTGACCGTGGCCTATATATATAAAGC
GGGGTGGAAATCACCCGAACGAGGCCGCCAACACCACCCGCTCGCGCTCG
CTGGCGACACGATTGCTCACACCGCAATCCCGAACCGTAACCCATCACGC
AGCTTGCGAAGTCGAGGATCAACCATTCCATCGGTCGAACTCACAGCTAG
CGTATTTGTGATAATTTTACTAAACCATCCCAAGAACACCGGCTAAGCAA
CAAAACCAACAAAAGTCTACCCCCGTCGCGTCCCGACCGACCACGTCCTC
CCACAGACGAGCAAATACGAGCGGGTCGACCCTCAAGAACGCGCTTACCA
ACAGCTCGAGCGAGCGTACACTGCCAAGACCGAGCAAGCCGCGGCGGCGA
AATCAGGGAAACCGGCGGCGTCGAAGGGCAAGGGCAAGCGCAAGCGGGGG
CGGGAGGGGGAGGAGGCTGCCGGGGAGGGGGGGGCGGTGGGCGGGGGGGG
TGACGCCGAACGAAAAAAGGGTGGGGAGGGTCGGTGGTTCGATTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1243:273..9618+

>mRNA_M-pyrifera_M_contig1243.4950.1 ID=mRNA_M-pyrifera_M_contig1243.4950.1|Name=mRNA_M-pyrifera_M_contig1243.4950.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3882bp|location=Sequence derived from alignment at M-pyrifera_M_contig1243:273..9618+ (Macrocystis pyrifera P11B4 male)
CAGGACCACGGAGTCCTAAAGATCTGCGGGCGCGACGCTGCGGTGGACTA
CTCGATCACCAAAGACAAGTTCAACGCCCTCAAGCAAGGCGCCAACGTGA
ACGGCTCGGGCGCTCAAGCAGCTCCTTCTGGGGGGGCGGCCGACAGCCCC
GACGAGAGCGACGAAGAACAAGAAAAAGAACAAGAGGGTGGCGACGGAAT
GGAGGTCGATTCCGATGACCCTGAGGAAGATGATGAGTTTTCGGACGACG
ACGACGACGGCAGCGAACAGGAGGGCGACGACGGCGTTGATGATGATGAT
GATGGCGAGGAGGAGGGAGGAGCAGACGCCGCGGCGGGGGCGGAGCGGCC
ACGGGCCCCGGATGTCCAGCACGGGTGCACGGTTTTCGTGAGGAACGTTG
CGTTCGACTGCGGACAGGAGGAGGTCAAGGAGAGGTTCGGCGCCTTCGGG
ACCGTGCGGCTGGCGCTGCTCGTGAAGGACCGCGCCACCGGGATGCCCAG
GGGGACGGCGTTCCAGGACCACGGAGTCCTAAAGATCTGCGGGCGCGACG
CTGCGGTGGACTACTCGATCACCAAAGACAAGTTCAACGCCCTCAAGCAA
GGCGCCAACGTGAACGGCTCGGGCGCTCAAGCAGCTCCTTCTGGGGGGGC
GGCCGACAGCCCCGACGAGAGCGACGAAGAACAAGAAAAAGAACAAGAGG
GTGGCGACGGAATGGAGGTCGATTCCGATGACCCTGAGGAAGATGATGAG
TTTTCGGACGACGACGACGACGGCAGCGAACAGGAGGGCGACGACGGCGT
TGATGATGATGATGATGGCGAGGAGGAGGGAGGAGCAGACGCCGCGGCGG
GGGCGGAGCGGCCACGGGCCCCGGATGTCCAGCACGGGTGCACGGTTTTC
GTGAGGAACGTTGCGTTCGACTGCGGACAGGAGGAGGTCAAGGAGAGGTT
CGGCGCCTTCGGGACCGTGCGGCTGGCGCTGCTCGTGAAGGACCGCGCCA
CCGGGATGCCCAGGGGGACGGCGTTCTTTTCCAACCGAGGCGAGGCCGAC
CTCTGCCTGGCAGCCGCGATAGGCGCGACCGATCCCGCCCTCGCACGCGA
CTCTGGGGGGTCGTGCGTCTACCTCGGGACCCGTGCGTTGCACATCACTC
GCGCCGTCGACCGAGAGCAGTTTTCCAACCGAGGCGAGGCCGACCTCTGC
CTGGCAGCCGCGATAGGCGCGACCGATCCCGCCCTCGCACGCGACTCTGG
GGGGTCGTGCGTCTACCTCGGGACCCGTGCGTTGCACATCACTCGCGCCG
TCGACCGAGAGCAGGCCGGGCGTCTAACCGTGGGCGCGCAGAAACGATCG
GGCCACAAGGATAAGCGCAACCTGTACCTTGCCGACGAGGGCCTCGTCTT
GGAGGACAGCGGCGCGGCGGAGGGCGCGGCGAAGTCGGACATGGAGAAGC
GCGTGCTCGCCCGCAAGGACAAGAAGAGCAAGCTGAAGAACCCCATCTTC
TTCGTCAGCCCCGTGCGTCTGAGCGTGCGCAACCTTGCCCGCCACGTTAC
CGACGGCAAGCTCAAGTCCATGGCGGCCACCGCGGCGAGGAGCGGGATTC
AGGCCGGCAGCGCGACCCCCCAGGACGTCCGCCTCTACCTCGAAGCTCAG
GCCGGGCGTCTAACCGTGGGCGCGCAGAAACGATCGGGCCACAAGGATAA
GCGCAACCTGTACCTTGCCGACGAGGGCCTCGTCTTGGAGGACAGCGGCG
CGGCGGAGGGCGCGGCGAAGTCGGACATGGAGAAGCGCGTGCTCGCCCGC
AAGGACAAGAAGAGCAAGCTGAAGAACCCCATCTTCTTCGTCAGCCCCGT
GCGTCTGAGCGTGCGCAACCTTGCCCGCCACGTTACCGACGGCAAGCTCA
AGTCCATGGCGGCCACCGCGGCGAGGAGCGGGATTCAGGCCGGCAGCGCG
ACCCCCCAGGACGTCCGCCTCTACCTCGAAGCTCAGGGGGAAGAGTTTTC
GGCCATCACTCCTCAGCGGCTGAAAATCCCCCCGGTGACGGCGGCCTCCA
TCGTCAAGACCAAGATCATCCGGGACATGGACAAGAAGCCAAACGTGAAT
GGGGAAGAGTTTTCGGCCATCACTCCTCAGCGGCTGAAAATCCCCCCGGT
GACGGCGGCCTCCATCGTCAAGACCAAGATCATCCGGGACATGGACAAGA
AGCCAAACGTGAATGACACGTCCGAGTTGCATCCGAGCAAGGGCTATGGC
TTCGTGGAGTTTGCACACCACGGACAGGCGTTGGCGGCGCTTCGCCAGAT
GAACAACAACCCCGCTTACTCCGAGCAAGCAAGGTCGGACGGGGCGGCGA
AGGGGGAGAGCTCAAGGCTACTCGTAGAGTTTAGCGTCGAAAACCACGCC
AAGCTCAAGCTCCAACAGGACACGTCCGAGTTGCATCCGAGCAAGGGCTA
TGGCTTCGTGGAGTTTGCACACCACGGACAGGCGTTGGCGGCGCTTCGCC
AGATGAACAACAACCCCGCTTACTCCGAGCAAGCAAGGTCGGACGGGGCG
GCGAAGGGGGAGAGCTCAAGGCTACTCGTAGAGTTTAGCGTCGAAAACCA
CGCCAAGCTCAAGCTCCAACAGAGCCGCAAGGATGCCTTCGATTCGCGCA
AGCGAGAGCTGAAAGCGCTCGGACTCGGGCAGGACGGCCGGCCGTTGAAG
AAAGTCGAGGAGGGCAAGGAAAAAAAGAGCCGCGGAAAAAGCCGCAAGGA
TGCCTTCGATTCGCGCAAGCGAGAGCTGAAAGCGCTCGGACTCGGGCAGG
ACGGCCGGCCGTTGAAGAAAGTCGAGGAGGGCAAGGAAAAAAAGAGCCGC
GGAAAACTCCAGCGCGAGAAGAAAAAACTGCGGCCCGAGTCAACGGGCAC
CGGCAACGACACCGACCAACTACCCGCAAGCCCAGCCGAGACACCGTCCA
AAAAAAAGCGAAAAAAACCGGGCGCTCAAGCCGAGGCCGAGGGTGTCACT
CCCAACGAGGGAGGCGTTTCGCGGGGGCAGGGGACAGGAGTCACGGGAGA
CGAGGAAACCGACGGGCTTGTGGGAGGGGAGGGGACGGAGGGAGAGGAAC
GGCCAAAGCGCAAGAAGAAGAGCAACAAGCTCCAGCGCGAGAAGAAAAAA
CTGCGGCCCGAGTCAACGGGCACCGGCAACGACACCGACCAACTACCCGC
AAGCCCAGCCGAGACACCGTCCAAAAAAAAGCGAAAAAAACCGGGCGCTC
AAGCCGAGGCCGAGGGTGTCACTCCCAACGAGGGAGGCGTTTCGCGGGGG
CAGGGGACAGGAGTCACGGGAGACGAGGAAACCGACGGGCTTGTGGGAGG
GGAGGGGACGGAGGGAGAGGAACGGCCAAAGCGCAAGAAGAAGAGCAACA
AGACGAGCAAATACGAGCGGGTCGACCCTCAAGAACGCGCTTACCAACAG
CTCGAGCGAGCGTACACTGCCAAGACCGAGCAAGCCGCGGCGGCGAAATC
AGGGAAACCGGCGGCGTCGAAGGGCAAGGGCAAGCGCAAGCGGGGGCGGG
AGGGGGAGGAGGCTGCCGGGGAGGGGGGGGCGGTGGGCGGGGGGGGTGAC
GCCGAACGAAAAAAGGGTGGGGAGGGTCGGTGGTTCGATTGAACGAGCAA
ATACGAGCGGGTCGACCCTCAAGAACGCGCTTACCAACAGCTCGAGCGAG
CGTACACTGCCAAGACCGAGCAAGCCGCGGCGGCGAAATCAGGGAAACCG
GCGGCGTCGAAGGGCAAGGGCAAGCGCAAGCGGGGGCGGGAGGGGGAGGA
GGCTGCCGGGGAGGGGGGGGCGGTGGGCGGGGGGGGTGACGCCGAACGAA
AAAAGGGTGGGGAGGGTCGGTGGTTCGATTGA
back to top