mRNA_M-pyrifera_M_contig124277.4946.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig124277.4946.1
Unique NamemRNA_M-pyrifera_M_contig124277.4946.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A5Q3L4E4_9BACT (Anthranilate synthase component 1 n=1 Tax=Planctomycetales bacterium 10988 TaxID=2603660 RepID=A0A5Q3L4E4_9BACT)

HSP 1 Score: 253 bits (645), Expect = 9.780e-80
Identity = 124/144 (86.11%), Postives = 133/144 (92.36%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRV+QFGSVE++D+M IERYSHVMHI+SNV G L P T+AFDALRACLPAGTVSGAPKVRAM+IIDELEPHRRGPYAGAVGY DF GNMDTCIALRT+VVQ  KAYVQAGAGIVADSVP  EYQETLNKA+GLLKAI
Sbjct:  349 DLGRNDVGRVSQFGSVEISDMMVIERYSHVMHITSNVNGKLRPETTAFDALRACLPAGTVSGAPKVRAMQIIDELEPHRRGPYAGAVGYFDFSGNMDTCIALRTMVVQGNKAYVQAGAGIVADSVPSSEYQETLNKAQGLLKAI 492
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A7X7EZP9_9BACT (Anthranilate synthase component 1 n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7EZP9_9BACT)

HSP 1 Score: 253 bits (645), Expect = 1.200e-79
Identity = 124/144 (86.11%), Postives = 133/144 (92.36%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVAQ+G+V L DVM IERYSHVMHI+SNV G L PG +AFDAL+ACLPAGTVSGAPKVRAMEIIDE+EPHRRGPYAGAVGY+DF GNMDTCIALRTIVVQD KAYVQAGAG+VADSVPE E+ ETLNKARGLLKAI
Sbjct:  360 DLGRNDVGRVAQYGTVRLDDVMTIERYSHVMHITSNVSGRLRPGMTAFDALQACLPAGTVSGAPKVRAMEIIDEVEPHRRGPYAGAVGYVDFNGNMDTCIALRTIVVQDDKAYVQAGAGVVADSVPEAEWNETLNKARGLLKAI 503
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BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A5C5ZIX7_9BACT (Anthranilate synthase component 1 n=1 Tax=Pseudobythopirellula maris TaxID=2527991 RepID=A0A5C5ZIX7_9BACT)

HSP 1 Score: 252 bits (644), Expect = 1.310e-79
Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVAQ+GSVEL+DVM IERYSHVMHI+SNV G L  G  AFDAL ACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDF G MDTCIALRT+VVQDG AYVQAGAGIVADSVP  EYQETLNKA+G+LKAI
Sbjct:  352 DLGRNDVGRVAQYGSVELSDVMVIERYSHVMHITSNVTGQLQEGLDAFDALAACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFAGQMDTCIALRTVVVQDGVAYVQAGAGIVADSVPASEYQETLNKAKGMLKAI 495
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BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A3A0DFQ3_9BACT (Anthranilate synthase component 1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DFQ3_9BACT)

HSP 1 Score: 252 bits (644), Expect = 1.920e-79
Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVA+FGSV ++DVM IERYSHVMHI+SNV G L     AFDAL ACLPAGTVSGAPKVRAMEIIDE+EPHRRGPYAGAVGYIDF GNMDTCIALRT+VVQDGKAYVQAGAGIVADSVP  EYQETLNKARGLLKAI
Sbjct:  365 DLGRNDVGRVAEFGSVTISDVMVIERYSHVMHITSNVTGKLRDDCDAFDALAACLPAGTVSGAPKVRAMEIIDEIEPHRRGPYAGAVGYIDFAGNMDTCIALRTVVVQDGKAYVQAGAGIVADSVPSLEYQETLNKARGLLKAI 508
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: D2R0Z9_PIRSD (Anthranilate synthase component 1 n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) TaxID=530564 RepID=D2R0Z9_PIRSD)

HSP 1 Score: 251 bits (640), Expect = 4.480e-79
Identity = 122/144 (84.72%), Postives = 132/144 (91.67%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVA+FGSVE++DVM IERYSHVMHI+SNV G L  G  AFDAL ACLPAGTVSGAPKVRAM+IIDELEPHRRGPYAGAVGYID+CGNMDTCIALRT+VV+  +AY+QAGAGIVADSVP  EYQETLNKARGLLKAI
Sbjct:  346 DLGRNDVGRVAKFGSVEISDVMVIERYSHVMHITSNVTGELAEGNDAFDALGACLPAGTVSGAPKVRAMQIIDELEPHRRGPYAGAVGYIDYCGNMDTCIALRTLVVKGSEAYIQAGAGIVADSVPSMEYQETLNKARGLLKAI 489
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A2E0WYN1_9PLAN (Anthranilate synthase component 1 n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E0WYN1_9PLAN)

HSP 1 Score: 250 bits (639), Expect = 1.410e-78
Identity = 123/144 (85.42%), Postives = 132/144 (91.67%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVA+FG+VEL+DVM IERYSHVMHI+SNV G L     AFDAL ACLPAGTVSGAPKVRAMEIIDE+EPHRRGPYAGAVGYIDF GNMDTCIALRT+V+Q+GKAYVQAGAGIVADSVPE+EY ETLNKARGLL AI
Sbjct:  377 DLGRNDVGRVAKFGTVELSDVMVIERYSHVMHITSNVTGELRDECDAFDALAACLPAGTVSGAPKVRAMEIIDEIEPHRRGPYAGAVGYIDFAGNMDTCIALRTVVIQNGKAYVQAGAGIVADSVPENEYHETLNKARGLLTAI 520
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A2G2JD13_9BACT (Anthranilate synthase component 1 n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2JD13_9BACT)

HSP 1 Score: 249 bits (636), Expect = 1.740e-78
Identity = 123/144 (85.42%), Postives = 132/144 (91.67%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVA++ SVEL+DVM IERYSHVMHI+SNV G L  G  AFDAL ACLPAGTVSGAPKVRAMEIIDE+EPHRRGPYAGAVGY+D+ GNMDTCIALRTIV+QDGKAYVQAGAG+VADS PE EYQETLNKARGLLKAI
Sbjct:  347 DLGRNDVGRVAKYRSVELSDVMVIERYSHVMHITSNVTGQLQEGKDAFDALAACLPAGTVSGAPKVRAMEIIDEIEPHRRGPYAGAVGYVDYRGNMDTCIALRTIVIQDGKAYVQAGAGMVADSDPETEYQETLNKARGLLKAI 490
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A5C6CSM5_9BACT (Anthranilate synthase component 1 n=1 Tax=Bythopirellula polymerisocia TaxID=2528003 RepID=A0A5C6CSM5_9BACT)

HSP 1 Score: 249 bits (637), Expect = 1.750e-78
Identity = 123/144 (85.42%), Postives = 131/144 (90.97%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVAQ+GSVE++DVM IERYSHVMHI+SNV G L  G  AFDAL ACLPAGTVSGAPKVRAMEIIDE+EP RRGPYAGAVGYIDF GNMDTCIALRT+V+ DGKAYVQAGAGIVADSVP  EYQETLNKA+GLLKAI
Sbjct:  360 DLGRNDVGRVAQYGSVEISDVMVIERYSHVMHITSNVTGQLRDGCDAFDALAACLPAGTVSGAPKVRAMEIIDEIEPTRRGPYAGAVGYIDFAGNMDTCIALRTVVIHDGKAYVQAGAGIVADSVPTTEYQETLNKAQGLLKAI 503
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A7V5PYD3_9PLAN (Anthranilate synthase component I family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V5PYD3_9PLAN)

HSP 1 Score: 238 bits (606), Expect = 2.590e-78
Identity = 118/144 (81.94%), Postives = 129/144 (89.58%), Query Frame = 1 
Query:    1 DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            DLGRNDVGRVAQ+GSV L+DVM +ERYSHVMHI+S+V G L P  +AFDALRACLPAGTVSGAPKVRAMEIIDELEP RRGPYAGAVGY DF GNMDTCIALRTIV    +A +QAGAGIVADSVPE+EYQETLNKA+GLL+AI
Sbjct:   15 DLGRNDVGRVAQYGSVRLSDVMVVERYSHVMHITSHVTGQLRPELTAFDALRACLPAGTVSGAPKVRAMEIIDELEPTRRGPYAGAVGYFDFRGNMDTCIALRTIVFYGNRADIQAGAGIVADSVPENEYQETLNKAKGLLRAI 158
[Close]
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Match: A0A8J7PSK4_9BACT (Chorismate-binding protein n=1 Tax=Zavarzinella sp. TaxID=1914240 RepID=A0A8J7PSK4_9BACT)

HSP 1 Score: 237 bits (604), Expect = 3.380e-78
Identity = 113/143 (79.02%), Postives = 130/143 (90.91%), Query Frame = 1 
Query:    4 LGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDALRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCIALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI 432
            LGRNDVGRVA+FGSV+L+D++ +ERYSHVMHISS V G L PG +AFDALR+CLPAGT+SGAPKVRAM+IIDELEPHRRGPY GAVGY+DF GNMDTCIALRT+VVQ   AYVQAGAG+VADS PE EYQET+NKA+GLL+A+
Sbjct:    1 LGRNDVGRVARFGSVQLSDLLTVERYSHVMHISSTVTGRLEPGKTAFDALRSCLPAGTLSGAPKVRAMQIIDELEPHRRGPYGGAVGYVDFTGNMDTCIALRTMVVQGQTAYVQAGAGLVADSDPEAEYQETVNKAKGLLRAL 143
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124277.4946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5Q3L4E4_9BACT9.780e-8086.11Anthranilate synthase component 1 n=1 Tax=Planctom... [more]
A0A7X7EZP9_9BACT1.200e-7986.11Anthranilate synthase component 1 n=1 Tax=Pirellul... [more]
A0A5C5ZIX7_9BACT1.310e-7986.81Anthranilate synthase component 1 n=1 Tax=Pseudoby... [more]
A0A3A0DFQ3_9BACT1.920e-7986.81Anthranilate synthase component 1 n=1 Tax=Planctom... [more]
D2R0Z9_PIRSD4.480e-7984.72Anthranilate synthase component 1 n=1 Tax=Pirellul... [more]
A0A2E0WYN1_9PLAN1.410e-7885.42Anthranilate synthase component 1 n=1 Tax=Planctom... [more]
A0A2G2JD13_9BACT1.740e-7885.42Anthranilate synthase component 1 n=1 Tax=Blastopi... [more]
A0A5C6CSM5_9BACT1.750e-7885.42Anthranilate synthase component 1 n=1 Tax=Bythopir... [more]
A0A7V5PYD3_9PLAN2.590e-7881.94Anthranilate synthase component I family protein n... [more]
A0A8J7PSK4_9BACT3.380e-7879.02Chorismate-binding protein n=1 Tax=Zavarzinella sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124277contigM-pyrifera_M_contig124277:2..433 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score251.5
Seed ortholog evalue2.3e-64
Seed eggNOG ortholog530564.Psta_3829
Preferred nametrpE
KEGG rclassRC00010,RC02148,RC02414
KEGG koko:K01657
KEGG ReactionR00985,R00986
KEGG Pathwayko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025
KEGG ModuleM00023
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EggNOG OGs2IX6Q@203682,COG0147@1,COG0147@2
EC4.1.3.27
COG Functional cat.H
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size432
Cds size432
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815760.3530915-CDS-M-pyrifera_M_contig124277:1..4331622815760.3530915-CDS-M-pyrifera_M_contig124277:1..433Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124277 2..433 +
1692277556.5379045-CDS-M-pyrifera_M_contig124277:1..4331692277556.5379045-CDS-M-pyrifera_M_contig124277:1..433Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124277 2..433 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124277.4946.1prot_M-pyrifera_M_contig124277.4946.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig124277 2..433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig124277.4946.1

>prot_M-pyrifera_M_contig124277.4946.1 ID=prot_M-pyrifera_M_contig124277.4946.1|Name=mRNA_M-pyrifera_M_contig124277.4946.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
DLGRNDVGRVAQFGSVELTDVMCIERYSHVMHISSNVQGNLTPGTSAFDA
LRACLPAGTVSGAPKVRAMEIIDELEPHRRGPYAGAVGYIDFCGNMDTCI
ALRTIVVQDGKAYVQAGAGIVADSVPEHEYQETLNKARGLLKAI
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mRNA from alignment at M-pyrifera_M_contig124277:2..433+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig124277.4946.1 ID=mRNA_M-pyrifera_M_contig124277.4946.1|Name=mRNA_M-pyrifera_M_contig124277.4946.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig124277:2..433+ (Macrocystis pyrifera P11B4 male)
GACTTGGGGCGCAACGACGTGGGCCGCGTGGCCCAATTCGGAAGCGTTGA
GCTGACCGACGTGATGTGTATCGAACGCTATAGCCATGTGATGCACATCT
CGTCGAACGTGCAAGGTAACCTGACCCCGGGAACCAGCGCCTTCGACGCA
TTGCGGGCGTGTCTGCCGGCTGGCACGGTATCTGGGGCGCCGAAAGTCAG
GGCGATGGAGATCATCGACGAGTTGGAGCCGCATCGACGTGGCCCTTATG
CCGGGGCGGTGGGGTACATCGACTTTTGCGGTAACATGGACACCTGCATC
GCCTTGCGGACTATCGTCGTGCAAGACGGCAAAGCGTACGTGCAGGCCGG
AGCCGGAATCGTGGCCGACAGCGTGCCGGAGCACGAATACCAGGAAACGC
TCAACAAAGCCCGCGGGCTTCTGAAAGCGATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig124277:2..433+

>mRNA_M-pyrifera_M_contig124277.4946.1 ID=mRNA_M-pyrifera_M_contig124277.4946.1|Name=mRNA_M-pyrifera_M_contig124277.4946.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig124277:2..433+ (Macrocystis pyrifera P11B4 male)
GACTTGGGGCGCAACGACGTGGGCCGCGTGGCCCAATTCGGAAGCGTTGA
GCTGACCGACGTGATGTGTATCGAACGCTATAGCCATGTGATGCACATCT
CGTCGAACGTGCAAGGTAACCTGACCCCGGGAACCAGCGCCTTCGACGCA
TTGCGGGCGTGTCTGCCGGCTGGCACGGTATCTGGGGCGCCGAAAGTCAG
GGCGATGGAGATCATCGACGAGTTGGAGCCGCATCGACGTGGCCCTTATG
CCGGGGCGGTGGGGTACATCGACTTTTGCGGTAACATGGACACCTGCATC
GCCTTGCGGACTATCGTCGTGCAAGACGGCAAAGCGTACGTGCAGGCCGG
AGCCGGAATCGTGGCCGACAGCGTGCCGGAGCACGAATACCAGGAAACGC
TCAACAAAGCCCGCGGGCTTCTGAAAGCGATTGACTTGGGGCGCAACGAC
GTGGGCCGCGTGGCCCAATTCGGAAGCGTTGAGCTGACCGACGTGATGTG
TATCGAACGCTATAGCCATGTGATGCACATCTCGTCGAACGTGCAAGGTA
ACCTGACCCCGGGAACCAGCGCCTTCGACGCATTGCGGGCGTGTCTGCCG
GCTGGCACGGTATCTGGGGCGCCGAAAGTCAGGGCGATGGAGATCATCGA
CGAGTTGGAGCCGCATCGACGTGGCCCTTATGCCGGGGCGGTGGGGTACA
TCGACTTTTGCGGTAACATGGACACCTGCATCGCCTTGCGGACTATCGTC
GTGCAAGACGGCAAAGCGTACGTGCAGGCCGGAGCCGGAATCGTGGCCGA
CAGCGTGCCGGAGCACGAATACCAGGAAACGCTCAACAAAGCCCGCGGGC
TTCTGAAAGCGATT
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