mRNA_M-pyrifera_M_contig124241.4939.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: A0A7R9CX66_TIMCR (Hypothetical protein n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9CX66_TIMCR) HSP 1 Score: 135 bits (341), Expect = 1.450e-38 Identity = 63/131 (48.09%), Postives = 79/131 (60.31%), Query Frame = 1
Query: 1 HKCSKPFFLGPKDCIV-AGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEG-KCGLKIPHPDPGTEFVLGCSLCRAAR 387
+KC+K ++ G C G E+ ELVC C + +CPKHGTDF+++KCR+CC TA FFCFGTTHFC CH R+ + ELP CPA PK EG +C L + HP G EF LGC +CR A
Sbjct: 4 YKCNKAYYGGEARCDAEVGEEYDPTELVCGACSDVSRAQMCPKHGTDFLEYKCRYCCSTAVFFCFGTTHFCNACHDDFQRVTNIPRL-ELPTCPAGPKAKQLEGDECPLHVKHPPTGEEFALGCGVCRNAH 133
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: V9IMU9_APICE (E3 ubiquitin-protein ligase MYCBP2 n=1 Tax=Apis cerana TaxID=7461 RepID=V9IMU9_APICE) HSP 1 Score: 139 bits (349), Expect = 2.420e-38 Identity = 64/132 (48.48%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 1 HKCSKPFFLGPKDCI--VAGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEG-KCGLKIPHPDPGTEFVLGCSLCRAAR 387
+KC K ++ G C V G F ELVC C + +CPKHG DF+++KCR+CC A FFCFGTTHFC CH R+ T+ GELP CPA PK EG +C L + HP G EF LGC +CR A
Sbjct: 119 YKCQKAYYGGEARCDAQVGGETFDPTELVCGGCSDVAGAQMCPKHGADFLEYKCRYCCSVAVFFCFGTTHFCNPCHDDFQRVTTIPK-GELPSCPAGPKAKQLEGDECPLHVKHPPTGEEFALGCGICRNAH 249
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: C3ZT15_BRAFL (Uncharacterized protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZT15_BRAFL) HSP 1 Score: 134 bits (336), Expect = 2.510e-37 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 1 HKCSKPFFLGPKDC---IVAGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEG-KCGLKIPHPDPGTEFVLGCSLCRAAR 387
+KC+K ++ G C G ++ ELVC C + +CPKHGTDF+++KCR+CC A FFCFGTTHFC CH R+ + ELP CPA P+G EG +C L + HP G EF LGC +CR A
Sbjct: 39 YKCNKAYYGGEARCDQEAGVGEDYDPAELVCGACSDVSRAQMCPKHGTDFLEYKCRYCCSVAVFFCFGTTHFCNPCHDDFQRVTNIPKQ-ELPHCPAGPRGKQLEGDECPLHVTHPPTGEEFALGCGVCRNAH 170
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: U4UUQ1_DENPD (Uncharacterized protein n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4UUQ1_DENPD) HSP 1 Score: 136 bits (342), Expect = 2.590e-37 Identity = 63/130 (48.46%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 4 KCSKPFFLGPKDCIV-AGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEG-KCGLKIPHPDPGTEFVLGCSLCRAAR 387
KC+K ++ G C AG + ELVC C + +CPKHG DF+++KCR+CC A FFCFGTTHFC CH R+ T+ S GELP CPA P+ EG +C L + HP G EF LGC +CR A
Sbjct: 119 KCNKAYYGGEARCDADAGDSYDPAELVCGACSDVARAQMCPKHGADFLEYKCRYCCSVAVFFCFGTTHFCNPCHDDFQRV-TILSKGELPVCPAGPRATQLEGDECPLHVKHPATGEEFALGCGVCRNAH 247
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: A0A182SJP2_9DIPT (Uncharacterized protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182SJP2_9DIPT) HSP 1 Score: 132 bits (333), Expect = 2.860e-37 Identity = 60/130 (46.15%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 4 KCSKPFFLGPKDCIVA-GVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEGK-CGLKIPHPDPGTEFVLGCSLCRAAR 387
+C+K ++ G C G F +ELVC C + +CPKHG DF+++KCR+CC A FFCFGTTHFC CH R+ T G+LP+CPA PK G+ C L + HP G EF LGC +CR A+
Sbjct: 11 QCAKAYYGGEARCDAELGENFNPQELVCGGCSDVSKAKMCPKHGMDFLEYKCRYCCSVAVFFCFGTTHFCDTCHDDFQRL-TNLPKGKLPRCPAGPKATQLTGEECPLHVVHPPTGEEFALGCGICRNAQ 139
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: F2U2L8_SALR5 (Highwire n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2L8_SALR5) HSP 1 Score: 144 bits (362), Expect = 3.210e-37 Identity = 66/129 (51.16%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 4 KCSKPFFLGPKDCIVAGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEGK-CGLKIPHPDPGTEFVLGCSLCRAAR 387
KCSK +F G + C V +F EELVC C A +CPKHGTDF+++KCR+CC A FFCFGTTHFC CH R + LPKCPA PK EG+ C L + HP G EF LGC +CR A+
Sbjct: 4086 KCSKAYFGGEEACAVGSNDFDEEELVCPACSGGEAQQVCPKHGTDFLEYKCRYCCSVAVFFCFGTTHFCQPCHDDYQRCLDCPKAN-LPKCPAGPKLTQLEGEECPLHVKHPPTGEEFALGCGICRNAQ 4213
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: A0A182EQ90_ONCOC (Uncharacterized protein n=1 Tax=Onchocerca ochengi TaxID=42157 RepID=A0A182EQ90_ONCOC) HSP 1 Score: 132 bits (333), Expect = 4.730e-37 Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 4 KCSKPFFLGPKDCI--VAGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEG-KCGLKIPHPDPGTEFVLGCSLCR 378
KC K +F G C + ++ EEL+C C + +C +HG DF+++KCRFCC A +FCFGTTHFCT CH R+ ++ + LPKCPA PK + +G +C LKI HP G EF LGC +CR
Sbjct: 27 KCGKAYFGGESRCQQELDNSQYNPEELICGGCSDVVGAQVCGRHGVDFLEFKCRFCCSVAVYFCFGTTHFCTACHDDFQRLMSLPTK-LLPKCPAGPKAIQLDGNECPLKIKHPPTGEEFPLGCGICR 153
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: A0A8B6G8T2_MYTGA (E3 ubiquitin-protein ligase MYCBP2 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6G8T2_MYTGA) HSP 1 Score: 135 bits (340), Expect = 6.680e-37 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 1 HKCSKPFFLGPKDC---IVAGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEG-KCGLKIPHPDPGTEFVLGCSLCRAAR 387
+KC+K ++ G C A E+ +ELVC C + +CPKHGTDF+++KCR+CC A FFCFGTTHFC CH R+ + ELP+CPA P+G +G +C L + HP G EF LGC +CR A
Sbjct: 126 YKCNKAYYGGEARCEEQAGAVEEYDPQELVCGGCSDVSRAQVCPKHGTDFLEYKCRYCCSVAVFFCFGTTHFCNACHDDFQRITNIPKL-ELPRCPAGPRGKLMDGDECPLHVKHPPTGEEFALGCGVCRNAH 257
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: A0A0L0C4Z6_LUCCU (E3 ubiquitin-protein ligase highwire n=3 Tax=Lucilia TaxID=7374 RepID=A0A0L0C4Z6_LUCCU) HSP 1 Score: 133 bits (334), Expect = 6.910e-37 Identity = 62/130 (47.69%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 4 KCSKPFFLGPKDCIVA-GVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVAGEGK-CGLKIPHPDPGTEFVLGCSLCRAAR 387
KC K ++ G C G +F EELVC C + +CPKHGTDF+++KCR+CC A FFCFGTTHFC CH R+ T +LP+CPA PK G+ C L + HP G EF LGC +CR A+
Sbjct: 53 KCQKAYYGGEARCDAEIGEKFNPEELVCGGCSDVARAQMCPKHGTDFLEYKCRYCCSVAVFFCFGTTHFCDTCHDDFQRL-TNIPKNKLPQCPAGPKAKQLMGEDCPLHVIHPPTGEEFALGCGVCRNAQ 181
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Match: A0A498SSY5_ACAVI (Uncharacterized protein n=1 Tax=Acanthocheilonema viteae TaxID=6277 RepID=A0A498SSY5_ACAVI) HSP 1 Score: 132 bits (333), Expect = 8.480e-37 Identity = 60/128 (46.88%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 4 KCSKPFFLGPKDCI--VAGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWKCRFCCGTATFFCFGTTHFCTECHTIPGRMQTMASSGELPKCPAKPKGVA-GEGKCGLKIPHPDPGTEFVLGCSLCR 378
KC K +F G C + ++ EEL+C C + IC +HG DF+++KCRFCC A +FCFGTTHFCT CH R+ + LPKCPA PKGV E +C L++ HP G EF LGC +CR
Sbjct: 47 KCKKAYFGGESRCQQELDNSQYNPEELICGGCSDVVGAQICGRHGVDFLEFKCRFCCSVAVYFCFGTTHFCTACHDDFQRLMCLPKK-LLPKCPAGPKGVQLEESECPLRVKHPPTGEEFPLGCGICR 173 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124241.4939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124241.4939.1 >prot_M-pyrifera_M_contig124241.4939.1 ID=prot_M-pyrifera_M_contig124241.4939.1|Name=mRNA_M-pyrifera_M_contig124241.4939.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp HKCSKPFFLGPKDCIVAGVEFKAEELVCTNCQPMPADAICPKHGTDFIQWback to top mRNA from alignment at M-pyrifera_M_contig124241:1..399+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124241.4939.1 ID=mRNA_M-pyrifera_M_contig124241.4939.1|Name=mRNA_M-pyrifera_M_contig124241.4939.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=399bp|location=Sequence derived from alignment at M-pyrifera_M_contig124241:1..399+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124241:1..399+ >mRNA_M-pyrifera_M_contig124241.4939.1 ID=mRNA_M-pyrifera_M_contig124241.4939.1|Name=mRNA_M-pyrifera_M_contig124241.4939.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig124241:1..399+ (Macrocystis pyrifera P11B4 male)back to top |