mRNA_M-pyrifera_M_contig124217.4934.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: A0A0D2UIZ9_CAPO3 (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UIZ9_CAPO3) HSP 1 Score: 112 bits (281), Expect = 4.370e-29 Identity = 50/77 (64.94%), Postives = 64/77 (83.12%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKDE-TIH 228
VDYILF+Q+D+ VNANPNEV+ Y+Y+S++ELK L++A+ANG+P+TPWF LIV FLY WWDQL V+SL D TIH
Sbjct: 160 VDYILFLQRDVNVNANPNEVKSYRYLSQDELKRLLSDAEANGMPVTPWFKLIVETFLYKWWDQLSTVASLSDPATIH 236
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: C3Z399_BRAFL (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z399_BRAFL) HSP 1 Score: 109 bits (272), Expect = 7.730e-28 Identity = 48/77 (62.34%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKDE-TIH 228
+DYILFIQK++ VN NPNEV+ ++Y++KE+L+ FL AK G PITPWF LIV++FLY WWD+L +V SLKD+ TIH
Sbjct: 149 IDYILFIQKEVDVNPNPNEVKTFQYINKEQLRHFLETAKEEGRPITPWFQLIVDRFLYSWWDKLHDVDSLKDQDTIH 225
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: A0A7S4MQK3_9EUKA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MQK3_9EUKA) HSP 1 Score: 108 bits (270), Expect = 1.900e-27 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKDETIHVM 234
VDYIL I+K++ NPNEV+D KYVS+E LK+F+A A NGIPITPWF LIV FLY WWDQL+++ SL+ T+H M
Sbjct: 159 VDYILIIRKNVSFTPNPNEVKDTKYVSQEGLKQFIAEADENGIPITPWFRLIVENFLYKWWDQLDDLESLQSNTVHKM 236
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: A0A6P5AYF1_BRABE (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AYF1_BRABE) HSP 1 Score: 107 bits (266), Expect = 1.490e-26 Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKDE-TIH 228
+DYILFIQK++ V NPNEV+ ++Y++KE+L+ FL AK +G PITPWF LIV++FLY WWD+L +V SLKD+ TIH
Sbjct: 190 IDYILFIQKEVDVKPNPNEVKSHQYINKEQLQHFLQTAKEDGRPITPWFQLIVDRFLYSWWDKLNDVDSLKDQGTIH 266
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: A0A8J9VGM0_BRALA (PKDREJ protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VGM0_BRALA) HSP 1 Score: 105 bits (261), Expect = 1.930e-24 Identity = 44/71 (61.97%), Postives = 60/71 (84.51%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLK 213
+DYILFIQK++ VN NPNEV+ Y+Y++KE+L+ FL AK G PITPWF LIV++FLY WWD+L++V+SL+
Sbjct: 346 IDYILFIQKEVDVNPNPNEVKTYQYINKEQLRRFLETAKEEGRPITPWFQLIVDRFLYSWWDKLDDVNSLE 416
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: A0A1Y1X7G8_9FUNG (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X7G8_9FUNG) HSP 1 Score: 99.8 bits (247), Expect = 4.180e-24 Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKDETIH 228
+DYI I+ D+ +N NPNEV YKYV+K+ELKE A K GI ITPWF LIV FLY WWD + ++ S KD TIH
Sbjct: 149 LDYIFIIKADVDLNINPNEVMSYKYVTKDELKEIFATQKETGIKITPWFKLIVENFLYKWWDNINDLESQKDLTIH 224
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: A0A822HZ32_9NEOB (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822HZ32_9NEOB) HSP 1 Score: 98.2 bits (243), Expect = 5.970e-24 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKD-ETIHVM 234
+DYILFIQK++KV+ +PNE+Q + YVSKEEL + L AK + ITPWF LI + FLY WWD LEN+ S +D + IH M
Sbjct: 105 IDYILFIQKEVKVDPDPNEIQSHCYVSKEELTQLLERAKRGEVKITPWFQLIADTFLYKWWDNLENLKSFEDHDKIHRM 183
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: B3RQV5_TRIAD (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RQV5_TRIAD) HSP 1 Score: 99.4 bits (246), Expect = 6.560e-24 Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKDE-TIHVM 234
+DYILFIQ+D++V+ PNEV Y+YVSKEELKE L A AN I ITPWF LI FL+ WWD L+++ + DE TIH M
Sbjct: 150 IDYILFIQRDVEVDMQPNEVMSYRYVSKEELKEILDTADANNIVITPWFRLIAKSFLFKWWDILDSLQTQVDEHTIHRM 228
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: UPI000359D827 (isopentenyl-diphosphate Delta-isomerase 1 isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359D827) HSP 1 Score: 100 bits (250), Expect = 1.030e-23 Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKD-ETIHVM 234
+DYILFI++D+ V ANPNEV+ YKYVSK+ELK+ + +A + G+ +TPWF LIV FL+ WWD L+N++S D TIH M
Sbjct: 255 IDYILFIKRDVDVVANPNEVKSYKYVSKQELKDIVESADSKGMLLTPWFKLIVQNFLFKWWDSLDNITSQADVNTIHKM 333
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Match: UPI000C6E1826 (isopentenyl-diphosphate Delta-isomerase 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E1826) HSP 1 Score: 99.0 bits (245), Expect = 1.760e-23 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFALIVNKFLYGWWDQLENVSSLKDE-TIHV 231
+DYIL +QKD+K+ NPNEV D +YVS+ ++ +FL+ + G ITPWF +IVN FLYGWWD L + +LKD+ +IHV
Sbjct: 183 IDYILILQKDVKIERNPNEVADVRYVSRGDMPDFLSYLRTKGCRITPWFDMIVNNFLYGWWDNLHQLETLKDQGSIHV 260 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124217.4934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124217.4934.1 >prot_M-pyrifera_M_contig124217.4934.1 ID=prot_M-pyrifera_M_contig124217.4934.1|Name=mRNA_M-pyrifera_M_contig124217.4934.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp VDYILFIQKDIKVNANPNEVQDYKYVSKEELKEFLANAKANGIPITPWFAback to top mRNA from alignment at M-pyrifera_M_contig124217:99..353+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124217.4934.1 ID=mRNA_M-pyrifera_M_contig124217.4934.1|Name=mRNA_M-pyrifera_M_contig124217.4934.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig124217:99..353+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124217:99..353+ >mRNA_M-pyrifera_M_contig124217.4934.1 ID=mRNA_M-pyrifera_M_contig124217.4934.1|Name=mRNA_M-pyrifera_M_contig124217.4934.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig124217:99..353+ (Macrocystis pyrifera P11B4 male)back to top |