mRNA_M-pyrifera_M_contig124205.4930.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6B2LBL7_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LBL7_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 3.400e-22 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 1 VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKSLFVRKYIDELLVHCR 210
+ ELQC ICL LLS P QC NGHLFC TC+L I+R +CP CRC LSE+ LS+SLFV K+I+ L ++C+
Sbjct: 20 LQELQCAICLGLLSHPRQCKNGHLFCETCVLRSIQRSPKCPSCRCPLSENELSRSLFVEKHINTLNLYCK 89
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6B2L4X5_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L4X5_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 1.630e-21 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 1 VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKSLFVRKYIDELLVHCR 210
+ ELQC ICL LLS P QC NGHLFC TC+L I+R +CP CRC LSE+ LS+SLFV K+I+ L ++C+
Sbjct: 20 LQELQCAICLGLLSHPRQCKNGHLFCETCVLRSIQRSPKCPSCRCPLSENELSRSLFVEKHINTLNLYCK 89
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: F4Q7L0_CAVFA (RGS-containing protein kinase RCK1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q7L0_CAVFA) HSP 1 Score: 81.6 bits (200), Expect = 1.830e-16 Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1 VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKSLFVRKYIDELLVHCRF 213
V ELQCGICL +++ P QC+ GHL+C+ CI + +++ ECP CR L+ LS+SLFV +++ L V C++
Sbjct: 16 VKELQCGICLQIINKPRQCLQGHLYCLDCISQYLKKSQECPTCRTSLNVEKLSRSLFVERHLRNLNVWCKY 86
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7LVL3_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LVL3_PARCT) HSP 1 Score: 63.5 bits (153), Expect = 9.670e-11 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 16 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 207
C IC D+L DP QC N HLFC CI E ++ CP C +L+E +LSK + V Y+D L++ C
Sbjct: 23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMQELTEEALSKPARIVTGYLDGLMIIC 87
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A7D9JY53_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JY53_PARCT) HSP 1 Score: 64.7 bits (156), Expect = 1.990e-10 Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 16 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 207
C IC D+L DP QC N HLFC TCI E ++ CP C L+E +LSK + V Y+D+L + C
Sbjct: 21 CPICTDVLKDPVQCHNQHLFCRTCITEHLKNSHNCPVCMQVLTEEALSKPARIVSGYLDDLKISC 85
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7JAD3_PARCT (TNF receptor-associated factor 6-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JAD3_PARCT) HSP 1 Score: 64.7 bits (156), Expect = 1.990e-10 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 16 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 207
C IC D+L DP QC N HLFC CI E ++ CP C +L+E +LSK + V Y+D L+V+C
Sbjct: 23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMEKLTEEALSKPARIVTGYLDGLMVNC 87
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A7D9JLE9_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JLE9_PARCT) HSP 1 Score: 64.3 bits (155), Expect = 2.720e-10 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 16 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 207
C IC D+L DP QC N HLFC CI E ++ CP C +L+E +LSK + V Y+D L++ C
Sbjct: 23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMQELTEEALSKPARIVTGYLDGLMISC 87
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7K095_PARCT (E3 ubiquitin- ligase NRDP1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K095_PARCT) HSP 1 Score: 62.0 bits (149), Expect = 9.160e-10 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 16 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKS-LFVRKYIDELLVHC 207
C IC D+L DP QC N HLFC CI E ++ CP C +L+E +LSK V +D L+++C
Sbjct: 21 CPICTDVLKDPVQCYNQHLFCRACITEHLKNSQTCPVCMEKLTEEALSKPPRIVTNILDGLMINC 85
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A7D9LAA5_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LAA5_PARCT) HSP 1 Score: 62.8 bits (151), Expect = 9.470e-10 Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 16 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 207
C IC D+L DP QC N HLFC CI E ++ CP C +L+E +LSK + V Y+D L + C
Sbjct: 23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSHNCPVCMQELTEEALSKPARIVTGYLDGLKISC 87
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7JSM6_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JSM6_PARCT) HSP 1 Score: 62.4 bits (150), Expect = 1.300e-9 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 16 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 207
C IC D+L DP QC N HLFC CI E ++ CP C +L+E +LSK + V +D L+V+C
Sbjct: 23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMEKLTEEALSKPARIVTNILDGLMVNC 87 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124205.4930.1 >prot_M-pyrifera_M_contig124205.4930.1 ID=prot_M-pyrifera_M_contig124205.4930.1|Name=mRNA_M-pyrifera_M_contig124205.4930.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESback to top mRNA from alignment at M-pyrifera_M_contig124205:271..495- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124205.4930.1 ID=mRNA_M-pyrifera_M_contig124205.4930.1|Name=mRNA_M-pyrifera_M_contig124205.4930.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=225bp|location=Sequence derived from alignment at M-pyrifera_M_contig124205:271..495- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124205:271..495- >mRNA_M-pyrifera_M_contig124205.4930.1 ID=mRNA_M-pyrifera_M_contig124205.4930.1|Name=mRNA_M-pyrifera_M_contig124205.4930.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig124205:271..495- (Macrocystis pyrifera P11B4 male)back to top |