mRNA_M-pyrifera_M_contig12384.4878.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: D8LF37_ECTSI (S1 motif domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF37_ECTSI) HSP 1 Score: 248 bits (632), Expect = 5.720e-82 Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 1
Query: 4 VSQPQRARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 414
VSQP+RARAADQVIQVGD +MGRVTRI TRQA VEIICVGETVLRE HRGI+RKEDIRATEVDKAEV+ SL PGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTT EKEPRKCAKPV
Sbjct: 54 VSQPKRARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A835YI70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI70_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.270e-55 Identity = 86/129 (66.67%), Postives = 108/129 (83.72%), Query Frame = 1
Query: 28 AADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKS-AAGAIMIPISWQEMQCPTTNEKEPRKCAKP 411
A DQVI+VGD++M RVTR+ ASVEI+C GETVLRE++ GII+KED+RATEVD+ ++ S PGDI+RARV SLGD+ QY+L+TA +LGVRWAKS A+GAIM+P+SWQEMQCP T +EPRKCA+P
Sbjct: 61 AQDQVIEVGDVVMARVTRVRALLASVEILCAGETVLREAYNGIIKKEDVRATEVDRVDMGQSFRPGDIVRARVSSLGDARQYYLTTAAPDLGVRWAKSDASGAIMVPVSWQEMQCPVTGVREPRKCARP 189
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: H6WBA8_VAULI (S1 motif domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA8_VAULI) HSP 1 Score: 155 bits (392), Expect = 1.810e-45 Identity = 72/125 (57.60%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 37 QVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKP 411
Q+++VG ++MGRVTR+ ASV+I+C G+ VLRE +GIIRKED+R+TEVDK ++ PGDI+R +VISLG+S YFLST+ +LGV WA+S AG +++PISW++MQCP T E RKCAKP
Sbjct: 61 QILEVGVVVMGRVTRVKNNLASVDILCAGKFVLREICQGIIRKEDVRSTEVDKVDMWKCFRPGDIVRTKVISLGNSRDYFLSTSGEDLGVSWARSEAGEVLVPISWEQMQCPKTKAVEFRKCAKP 185
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A2R6WRL2_MARPO (S1 motif domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRL2_MARPO) HSP 1 Score: 149 bits (375), Expect = 1.800e-43 Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 19 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 414
R + V + G ++ ++T++ RQA+ I+CVG +R+ GIIR++D+RATE+DK ++ TS PGDI+RA VISLGDS Y+LSTA+NELGV A S AGA M+P+SWQEMQCP T ++EPRK AK +
Sbjct: 16 REKERGAVPEPGTVVTAKITKLFPRQAAASIVCVGPRAVRDKFTGIIRQQDVRATEIDKVDMHTSFRPGDIVRAEVISLGDSRAYYLSTAKNELGVVSATSDAGAAMVPVSWQEMQCPITGQREPRKVAKVI 147
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: D8S0J7_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S0J7_SELML) HSP 1 Score: 149 bits (377), Expect = 4.040e-43 Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 19 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 414
R + D V + G + ++T++ R AS +I+CVG ++E GI+R++D+R TE+DK ++ +S PGDIIRA VISLGDS Y+LSTA+NELGV A S AGA M+ +SWQEMQCP TN++EPRK AK V
Sbjct: 62 REKERDAVPEAGSTVTAKITKVQARMASADIVCVGPRAVKEKFTGIVRQQDVRLTEIDKVDMHSSFRPGDIIRAEVISLGDSRAYYLSTAKNELGVVSAVSVAGATMVAVSWQEMQCPLTNQREPRKVAKVV 193
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A2R6WRL8_MARPO (S1 motif domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRL8_MARPO) HSP 1 Score: 149 bits (375), Expect = 6.810e-43 Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 19 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 414
R + V + G ++ ++T++ RQA+ I+CVG +R+ GIIR++D+RATE+DK ++ TS PGDI+RA VISLGDS Y+LSTA+NELGV A S AGA M+P+SWQEMQCP T ++EPRK AK +
Sbjct: 60 REKERGAVPEPGTVVTAKITKLFPRQAAASIVCVGPRAVRDKFTGIIRQQDVRATEIDKVDMHTSFRPGDIVRAEVISLGDSRAYYLSTAKNELGVVSATSDAGAAMVPVSWQEMQCPITGQREPRKVAKVI 191
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A176WMU3_MARPO (S1 motif domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WMU3_MARPO) HSP 1 Score: 149 bits (377), Expect = 3.510e-42 Identity = 71/132 (53.79%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 19 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 414
R + V + G ++ ++T++ RQA+ I+CVG +R+ GIIR++D+RATE+DK ++ TS PGDI+RA VISLGDS Y+LSTA+NELGV A S AGA M+P+SWQEMQCP T ++EPRK AK V
Sbjct: 60 REKERGAVPEPGTVVTAKITKLFPRQAAASIVCVGPRAVRDKFTGIIRQQDVRATEIDKVDMHTSFRPGDIVRAEVISLGDSRAYYLSTAKNELGVVSATSDAGAAMVPVSWQEMQCPITGQREPRKVAKEV 191
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A2P5BB28_PARAD (Exosome complex component CSL n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BB28_PARAD) HSP 1 Score: 145 bits (367), Expect = 1.440e-41 Identity = 71/128 (55.47%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 25 RAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAK 408
RA V + G I++ RVTR+ R AS +I+CVG ++E G+IR++D+RATE+DK ++ +S PGDI+RA V+SLGD+ Y+LSTA+NELGV A+SAAGA M+PISW EMQCP+T + E RK AK
Sbjct: 70 RANGAVPEPGSIVIARVTRVMARMASADIMCVGAKSMKEKFSGVIRQQDVRATEIDKVDMHSSFRPGDIVRALVLSLGDARAYYLSTAKNELGVLSAESAAGATMVPISWTEMQCPSTGQIEHRKVAK 197
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A8H7EMR4_9FUNG (S1 motif domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EMR4_9FUNG) HSP 1 Score: 145 bits (366), Expect = 1.480e-41 Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 1
Query: 19 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKP 411
R + V +VG +I G+V R+D ++A + I+ VGET +E G IR +D+RA E DK ++ S PGDI+RA VISLGD+ YFLSTA+NELGV +A S AGA MIPISWQEMQCP T E RKCAKP
Sbjct: 58 REKEQSAVPEVGSVITGKVIRVDPQRAVIAIMVVGETPCKEDFMGSIRVQDVRAAEKDKVKIYQSFRPGDIVRAEVISLGDARSYFLSTAKNELGVIFATSVAGATMIPISWQEMQCPKTKAIEYRKCAKP 188
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A397V822_9GLOM (S1 motif domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V822_9GLOM) HSP 1 Score: 145 bits (366), Expect = 1.820e-41 Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = 1
Query: 19 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKP 411
R + V VG II G+V R+ T++A V I+ VG ++ +GIIR +D+RATE DK ++ S GDI+RA VISLGD+ Y+LSTA+NELGV +A+S AGA+MIPISWQEMQC T EPRKCAKP
Sbjct: 59 REKVHSAVPDVGSIITGKVIRMTTKEAVVSIMVVGNMPCKDDFQGIIRSQDVRATEKDKVKIYNSFRLGDIVRAEVISLGDARSYYLSTAKNELGVIYAQSVAGAVMIPISWQEMQCTKTKTMEPRKCAKP 189 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12384.4878.1 >prot_M-pyrifera_M_contig12384.4878.1 ID=prot_M-pyrifera_M_contig12384.4878.1|Name=mRNA_M-pyrifera_M_contig12384.4878.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp QVSQPQRARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRback to top mRNA from alignment at M-pyrifera_M_contig12384:4328..5590- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12384.4878.1 ID=mRNA_M-pyrifera_M_contig12384.4878.1|Name=mRNA_M-pyrifera_M_contig12384.4878.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1263bp|location=Sequence derived from alignment at M-pyrifera_M_contig12384:4328..5590- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12384:4328..5590- >mRNA_M-pyrifera_M_contig12384.4878.1 ID=mRNA_M-pyrifera_M_contig12384.4878.1|Name=mRNA_M-pyrifera_M_contig12384.4878.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig12384:4328..5590- (Macrocystis pyrifera P11B4 male)back to top |