mRNA_M-pyrifera_M_contig123569.4822.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123569.4822.1
Unique NamemRNA_M-pyrifera_M_contig123569.4822.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: A0A409VIV4_9AGAR (Protein kinase domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409VIV4_9AGAR)

HSP 1 Score: 65.9 bits (159), Expect = 2.290e-11
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1
Query:    4 QAYATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYDP 138
            Q Y  TLPL GV+CYL+ LL  L  +H  GIIHRDVKP+NFLYDP
Sbjct:  450 QEYFQTLPLEGVKCYLRCLLRALRDIHSRGIIHRDVKPANFLYDP 494          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: A0A197JZW6_9FUNG (Kinase-like protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZW6_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 4.660e-9
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 1
Query:   10 YATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYD 135
            Y  TLP+ G+RCY + LL  L  +H   IIHRDVKPSNFLYD
Sbjct:  425 YYKTLPMDGIRCYFRALLKALMHVHANDIIHRDVKPSNFLYD 466          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: A0A182LRE3_9DIPT (Protein kinase domain-containing protein n=1 Tax=Anopheles culicifacies TaxID=139723 RepID=A0A182LRE3_9DIPT)

HSP 1 Score: 59.3 bits (142), Expect = 4.660e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1
Query:    1 EQAYATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYDP 138
            +Q YA   P AGV+CY+K+L + L R H  G+IHRDVKPSNFL+ P
Sbjct:  171 DQYYAQMTP-AGVQCYMKELFIALERTHLYGVIHRDVKPSNFLHSP 215          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: UPI001ED87ACF (cell division cycle 7-related protein kinase-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87ACF)

HSP 1 Score: 57.8 bits (138), Expect = 1.630e-8
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1
Query:   10 YATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYD 135
            Y T + +  +R Y+K LLV L R+H  GIIHRDVKPSNFLYD
Sbjct:  214 YVTKMNVDEIRLYMKNLLVALQRVHSFGIIHRDVKPSNFLYD 255          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: A0A8K0KIN6_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KIN6_LADFU)

HSP 1 Score: 57.4 bits (137), Expect = 1.680e-8
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1
Query:   10 YATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYD 135
            Y T + +  +R Y+K LLV L R+H  G+IHRDVKPSNFLYD
Sbjct:  216 YLTLMDVDEIRLYMKNLLVALKRVHSFGVIHRDVKPSNFLYD 257          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: UPI001939F742 (probable serine/threonine-protein kinase cdc7 n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939F742)

HSP 1 Score: 57.4 bits (137), Expect = 2.220e-8
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 1
Query:   22 LPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYD 135
            L L GVRCY++ LL  L R+H   +IHRDVKPSNFLYD
Sbjct:  222 LSLEGVRCYMRNLLTALRRVHKFNVIHRDVKPSNFLYD 259          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: A0A875S5D8_EENNA (Protein kinase domain-containing protein n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875S5D8_EENNA)

HSP 1 Score: 57.4 bits (137), Expect = 2.230e-8
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 1
Query:   22 LPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYDP 138
            LP+ G+R Y+++LL  L  +H  GIIHRD+KP+NFLYDP
Sbjct:  270 LPMPGIRKYMEELLTALYHVHQGGIIHRDIKPTNFLYDP 308          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: A0A8E2DRW3_9APHY (Kinase-like protein n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2DRW3_9APHY)

HSP 1 Score: 57.0 bits (136), Expect = 3.050e-8
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 1
Query:    4 QAYATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYDP 138
            + Y  +LP+AGV+ Y + +   L  +H  GIIHRDVKP+NFLYDP
Sbjct:  283 RGYFRSLPMAGVKAYFRCMFRALRDIHARGIIHRDVKPANFLYDP 327          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: UPI001C7BF883 (uncharacterized protein n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7BF883)

HSP 1 Score: 57.0 bits (136), Expect = 3.050e-8
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 1
Query:   10 YATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYDP 138
            Y  TLP+AG++ Y + L   L  +H  GIIHRDVKP+NFL+DP
Sbjct:  312 YFATLPMAGIKSYFRCLFRALRDIHSRGIIHRDVKPANFLFDP 354          
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Match: A0A1E5RCR6_HANUV (Cell division control protein 7 n=1 Tax=Hanseniaspora uvarum TaxID=29833 RepID=A0A1E5RCR6_HANUV)

HSP 1 Score: 56.6 bits (135), Expect = 4.160e-8
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1
Query:   10 YATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYD 135
            Y   LPL G++ Y+ QLL  LA LH  GIIHRD+KP+NFL+D
Sbjct:  190 YFKYLPLNGIKTYIAQLLKALAYLHSKGIIHRDIKPNNFLFD 231          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123569.4822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A409VIV4_9AGAR2.290e-1166.67Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A197JZW6_9FUNG4.660e-961.90Kinase-like protein n=1 Tax=Linnemannia elongata A... [more]
A0A182LRE3_9DIPT4.660e-958.70Protein kinase domain-containing protein n=1 Tax=A... [more]
UPI001ED87ACF1.630e-861.90cell division cycle 7-related protein kinase-like ... [more]
A0A8K0KIN6_LADFU1.680e-859.52Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
UPI001939F7422.220e-865.79probable serine/threonine-protein kinase cdc7 n=1 ... [more]
A0A875S5D8_EENNA2.230e-858.97Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A8E2DRW3_9APHY3.050e-853.33Kinase-like protein n=1 Tax=Obba rivulosa TaxID=10... [more]
UPI001C7BF8833.050e-855.81uncharacterized protein n=1 Tax=Marasmius oreades ... [more]
A0A1E5RCR6_HANUV4.160e-859.52Cell division control protein 7 n=1 Tax=Hanseniasp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123569contigM-pyrifera_M_contig123569:89..226 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size138
Cds size138
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815754.1225522-CDS-M-pyrifera_M_contig123569:88..2261622815754.1225522-CDS-M-pyrifera_M_contig123569:88..226Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123569 89..226 +
1692277553.636961-CDS-M-pyrifera_M_contig123569:88..2261692277553.636961-CDS-M-pyrifera_M_contig123569:88..226Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123569 89..226 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123569.4822.1prot_M-pyrifera_M_contig123569.4822.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123569 89..226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123569.4822.1

>prot_M-pyrifera_M_contig123569.4822.1 ID=prot_M-pyrifera_M_contig123569.4822.1|Name=mRNA_M-pyrifera_M_contig123569.4822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
EQAYATTLPLAGVRCYLKQLLVPLARLHGAGIIHRDVKPSNFLYDP
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mRNA from alignment at M-pyrifera_M_contig123569:89..226+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123569.4822.1 ID=mRNA_M-pyrifera_M_contig123569.4822.1|Name=mRNA_M-pyrifera_M_contig123569.4822.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=138bp|location=Sequence derived from alignment at M-pyrifera_M_contig123569:89..226+ (Macrocystis pyrifera P11B4 male)
GAGCAGGCGTACGCCACCACGCTGCCACTCGCTGGTGTACGCTGCTACCT GAAGCAGCTGCTGGTGCCCTTGGCACGGCTCCACGGAGCTGGCATCATCC ACAGAGACGTGAAACCGAGCAACTTCCTGTATGACCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig123569:89..226+

>mRNA_M-pyrifera_M_contig123569.4822.1 ID=mRNA_M-pyrifera_M_contig123569.4822.1|Name=mRNA_M-pyrifera_M_contig123569.4822.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig123569:89..226+ (Macrocystis pyrifera P11B4 male)
GAGCAGGCGTACGCCACCACGCTGCCACTCGCTGGTGTACGCTGCTACCT
GAAGCAGCTGCTGGTGCCCTTGGCACGGCTCCACGGAGCTGGCATCATCC
ACAGAGACGTGAAACCGAGCAACTTCCTGTATGACCCCGAGCAGGCGTAC
GCCACCACGCTGCCACTCGCTGGTGTACGCTGCTACCTGAAGCAGCTGCT
GGTGCCCTTGGCACGGCTCCACGGAGCTGGCATCATCCACAGAGACGTGA
AACCGAGCAACTTCCTGTATGACCCC
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