mRNA_M-pyrifera_M_contig123557.4819.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: A0A1U7ZSN6_NELNU (uncharacterized protein LOC104595844 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZSN6_NELNU) HSP 1 Score: 116 bits (290), Expect = 4.100e-27 Identity = 56/101 (55.45%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 196 EVYTDSDIAQLGTCACKYE-DEDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
E+YT+ LGTC + D + G R YD GKTCHQCRQKT LRTHCS CN ++GQFCG CL RYGENV E + +W CPVCR ICNCS
Sbjct: 189 EIYTEEHDKLLGTCETSWTLFVDGYGKDG--KRVYDPVKGKTCHQCRQKTLGLRTHCSKCNLVQGQFCGDCLYMRYGENVIEANQNPNWICPVCRGICNCS 287
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: A0A2J6L124_LACSA (zf-4CXXC_R1 domain-containing protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6L124_LACSA) HSP 1 Score: 112 bits (279), Expect = 9.950e-27 Identity = 55/107 (51.40%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 196 EVYTDSDIAQLGT-------CACKYEDEDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
EVYT+ LG C Y+DE + R YD+ GK+CHQCRQKTT RT C CN+++GQFCG CL RYGENV E +E W CPVCR ICNCS
Sbjct: 118 EVYTEEHEKALGDHKETWTLCVDGYDDEGN--------RMYDAYAGKSCHQCRQKTTGHRTKCCKCNTVQGQFCGDCLFMRYGENVLEAKENPEWVCPVCRDICNCS 216
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: D8T998_SELML (zf-4CXXC_R1 domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T998_SELML) HSP 1 Score: 111 bits (278), Expect = 1.680e-26 Identity = 64/123 (52.03%), Postives = 70/123 (56.91%), Query Frame = 1
Query: 157 ASSPQVNRSRR----------VKEVYTDSDIAQLGTCACKYEDEDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
+SSP RSRR + EVYT LG CA K E + R YD+ +GKTCHQCRQKT LRT C C SL GQFCG CL RYGENV E +SW CPVCR ICNCS
Sbjct: 76 SSSPSERRSRRSGRLAGTGGPIPEVYTQEHEKLLG-CA-KEEWQLFVDGYNGGERIYDAFSGKTCHQCRQKTVGLRTFCYECESLHGQFCGDCLFMRYGENVKEALADKSWKCPVCRGICNCS 196
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: F6I7D1_VITVI (zf-4CXXC_R1 domain-containing protein n=3 Tax=Vitis TaxID=3603 RepID=F6I7D1_VITVI) HSP 1 Score: 111 bits (278), Expect = 4.060e-26 Identity = 48/69 (69.57%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 289 RQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
R YDS GKTCHQCRQKT LRTHCS CN ++GQFCG CL RYGE+V E+ E +W CPVCR ICNCS
Sbjct: 113 RIYDSIKGKTCHQCRQKTLGLRTHCSQCNMVQGQFCGDCLYMRYGEHVLESNENPNWICPVCRGICNCS 181
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: W9SKN0_9ROSA (zf-4CXXC_R1 domain-containing protein n=3 Tax=Morus notabilis TaxID=981085 RepID=W9SKN0_9ROSA) HSP 1 Score: 112 bits (281), Expect = 5.890e-26 Identity = 65/139 (46.76%), Postives = 82/139 (58.99%), Query Frame = 1
Query: 124 RRSSGMRARSPASSPQVNRSRRVKEVYTDSDI-AQLGTCACKYEDE--------DSSRRV------GFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
RRSS ++ +P S +V+ ++ KE+ D + A+ G+ Y +E D S + R YDS GKTCHQCRQKT RTHCSSCN++RGQFCG CL RYGE+V E E +W CPVCR ICNCS
Sbjct: 102 RRSSRLKNSTPVSYSEVDLVKKDKELGDDESVLAEAGSKPEIYTEEHEKLLGNTDKSWTLFVDGCGSDGKRIYDSVKGKTCHQCRQKTLGYRTHCSSCNAVRGQFCGDCLYMRYGEHVLEAIENPNWICPVCRGICNCS 240
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: A0A7N2N105_QUELO (zf-4CXXC_R1 domain-containing protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2N105_QUELO) HSP 1 Score: 110 bits (275), Expect = 6.160e-26 Identity = 53/101 (52.48%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 196 EVYTDSDIAQLGTCACKYE-DEDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
E+YT+ LG C + D + G R YD G+TCHQCRQKT LRTHCS C ++GQFCG CL RYGENV E + W CPVCR ICNCS
Sbjct: 123 EIYTEEHDKLLGDCKSSWTLSVDGYGKDG--ERIYDPVNGETCHQCRQKTLGLRTHCSQCTLVQGQFCGDCLYMRYGENVIEANQNPDWICPVCRGICNCS 221
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: A0A328D774_9ASTE (RING-type domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328D774_9ASTE) HSP 1 Score: 111 bits (278), Expect = 7.310e-26 Identity = 55/101 (54.46%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 196 EVYTDSDIAQLGTCACKYE-DEDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
EVYT+ LG+ + D + G R YD TGKTCHQCRQKT LRTHCS CN ++GQFCG CL RYGE+V E + W CPVCR ICNCS
Sbjct: 113 EVYTEEHEKLLGSTEMSWTLFVDGCGKDG--KRIYDPVTGKTCHQCRQKTLGLRTHCSHCNMIQGQFCGDCLFMRYGEHVLEANQNPDWRCPVCRGICNCS 211
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: A0A059LK63_9CHLO (Monoamine-oxidase A repressor R1 Zinc-finger domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LK63_9CHLO) HSP 1 Score: 111 bits (278), Expect = 1.750e-25 Identity = 57/108 (52.78%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 193 KEVYTDSDIAQLGTCACKYE------DEDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCSS 498
+E+Y + LG CA +E D+D RRV YD G+TCHQCRQKT LRT CS+C SL+G CG CL RYGENV E R SWTCPVCR +CNCS+
Sbjct: 382 EELYGVEHVLALGRCASPWELFVDGYDKDG-RRV------YDPECGQTCHQCRQKTLGLRTACSACGSLQGVLCGDCLFMRYGENVREARADPSWTCPVCRDLCNCSA 482
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: B9HRU9_POPTR (zf-4CXXC_R1 domain-containing protein n=3 Tax=Populus TaxID=3689 RepID=B9HRU9_POPTR) HSP 1 Score: 109 bits (272), Expect = 2.950e-25 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 196 EVYTDSDIAQLGTCACKYE-DEDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
E+YT+ D LG + + D + G R YD G+TCHQCRQKT L THCS CN ++GQFCG CL RYGENV E + +W CPVCR ICNCS
Sbjct: 145 EIYTEEDENLLGDHKTTWTLNVDGCGKDG--RRVYDPEMGETCHQCRQKTLGLHTHCSKCNLVQGQFCGDCLFMRYGENVIEVNQDPNWICPVCRGICNCS 243
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Match: A0A7C9AXN4_OPUST (zf-4CXXC_R1 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AXN4_OPUST) HSP 1 Score: 106 bits (265), Expect = 5.260e-25 Identity = 53/101 (52.48%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 196 EVYTDSDIAQLGTCACKYED-EDSSRRVGFAMRQYDSTTGKTCHQCRQKTTDLRTHCSSCNSLRGQFCGPCLSWRYGENVHETREAESWTCPVCRLICNCS 495
EVYT+ LG + D R G R YD GKTCHQCRQKT +RTHCS CN ++GQFCG CL RYGE+V E + W CP CR ICNCS
Sbjct: 29 EVYTEEHEKLLGNTEMPWTFFVDGYRADG--TRIYDPVNGKTCHQCRQKTLGMRTHCSKCNLVQGQFCGDCLYMRYGEHVVEANQNPDWICPPCRGICNCS 127 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123557.4819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123557.4819.1 >prot_M-pyrifera_M_contig123557.4819.1 ID=prot_M-pyrifera_M_contig123557.4819.1|Name=mRNA_M-pyrifera_M_contig123557.4819.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp RRSSERLRGVKAPSYADDMVAQSRSDEHLIRALRRSRTPTRRRSSGMRARback to top mRNA from alignment at M-pyrifera_M_contig123557:14..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123557.4819.1 ID=mRNA_M-pyrifera_M_contig123557.4819.1|Name=mRNA_M-pyrifera_M_contig123557.4819.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig123557:14..517+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123557:14..517+ >mRNA_M-pyrifera_M_contig123557.4819.1 ID=mRNA_M-pyrifera_M_contig123557.4819.1|Name=mRNA_M-pyrifera_M_contig123557.4819.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig123557:14..517+ (Macrocystis pyrifera P11B4 male)back to top |