mRNA_M-pyrifera_M_contig12340.4789.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: D7FQR5_ECTSI (FAD binding / catalytic/ tRNA dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR5_ECTSI) HSP 1 Score: 677 bits (1746), Expect = 1.080e-241 Identity = 349/476 (73.32%), Postives = 388/476 (81.51%), Query Frame = 1
Query: 1 MMRLTAMSVSALAVMHSTRSFVLPFKAPSAPMTLCLTRARCQRISSRTHPA-------RSTAEVTQVGAG----SPSPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDPRGSQEEKNV-ESLAVDPGCVS-VP----RGVPDGRFRDGRMYYTD 1377
MM+L +MS+SAL V+HS R+F P PS L RAR R ++ P + T++ AG SP +GRGREVFSLAPMMEYTDRHMR+LLRLLT RTVLWTEMVPS TI HN DDL RFLDYNE VEHPVVLQIGGSDTT V EACRLARPY YDAINLNCGCPSEKVAGKGAFGAALMRSPS VKDLCLAM+DGAGE+TPITVKCRIGVD+DDSYEQLAAFV+EV RGAGV HFI+HARKAILGGLSPA+NR+IPPL++DFVYRLVKDFPDVDFTLNGG+NTYEE A+SCLEQGAHGVMVGRSWSS PWYWSQADS FG KDPGL RREVLE YAEYGERQEKA G +WLACRRRLAKP+WH+FHGEK GKKFRVALE +LRE++ FGEI++KSL + Q+QVD LPG++W R ++E ESLA DPGCVS +P RGVPDGRFRDGR+ Y D
Sbjct: 1 MMKLKSMSLSALVVVHSARAF--PLAIPSQHQGL---RARRCRHTAAAPPVDHWETDGKKHGRRTRMEAGAAPDSPPSALGRGREVFSLAPMMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDDLGRFLDYNEEVEHPVVLQIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKVAGKGAFGAALMRSPSLVKDLCLAMKDGAGEDTPITVKCRIGVDNDDSYEQLAAFVEEVSRGAGVPHFIVHARKAILGGLSPAQNRNIPPLKYDFVYRLVKDFPDVDFTLNGGVNTYEE---AVSCLEQGAHGVMVGRSWSSNPWYWSQADSMLFGAKDPGLTRREVLERYAEYGERQEKACGEKWLACRRRLAKPIWHMFHGEKGGKKFRVALEGMLREDKSFGEIVQKSLLAMPQDQVDWLPGENWRARQAEEGAGQGESLAQDPGCVSSLPSPSSRGVPDGRFRDGRLLYID 468
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A836CCW1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW1_9STRA) HSP 1 Score: 440 bits (1132), Expect = 5.480e-150 Identity = 213/347 (61.38%), Postives = 260/347 (74.93%), Query Frame = 1
Query: 205 MGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPG 1245
+ R + SLAPMMEYTDRHMR++LRL TK+ V+WTEM+P +I HN+DDL R L Y++ EHPVVLQ+GGSD +V AC LARPY YD INLN GCPSE+VAGKGAFGAALMR P V D+C AMR+G+G +VKCRIGVDD+DSY LA FVD V RG GV+ FI+HARKAIL GLSP +NR +PPL++D+VYRLV+DFP++ FTLNGG+ TY V+ AL + GAHGVMVGR+ +PWYWSQ+DS+ FG D LNRR+VL+TY EY E E G +WL RRRL KPVW+LFHGE GKKFR L+ ++ +ERPF I+ +LQ L + VD PG
Sbjct: 3 LSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGG-AQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEAL---DGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPG 345
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A4D9D156_9STRA (tRNA-dihydrouridine synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D156_9STRA) HSP 1 Score: 379 bits (972), Expect = 1.080e-125 Identity = 193/350 (55.14%), Postives = 253/350 (72.29%), Query Frame = 1
Query: 220 EVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKD--PGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALE-SLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDP 1260
E SLAPMMEYTDRH+RFLLRLL+KR VL+TEM+ +PT+ HN + RFL +N EHPVVLQ+GGSD ++EA RLA PY Y+A+NLNCGCPSE+V+GKG FGAALMR P V +LC AM +G+ + P+TVKCRIGVDDDDSYEQLA FV+ V + V HF++HARKAILGGLSP +NR +PPL++ FVYRL ++FP + FTLNGG+ +YE+V L +G HGVM+GR+ ++P+YWS D++ FG+ D PGL RREVL+ Y Y + +E+A GG + RR L KPV +LF GE GK+FR L+ +LL ++LE++ + ++ LPG + P
Sbjct: 23 ERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPGQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSRGKIPVTVKCRIGVDDDDSYEQLAHFVETVSGASPVRHFLVHARKAILGGLSPDQNRRVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDV---AEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQ-EEEARGGPRM--RRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVLPGSAAIP 366
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A7S3USD9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD9_HETAK) HSP 1 Score: 377 bits (967), Expect = 3.590e-124 Identity = 194/371 (52.29%), Postives = 255/371 (68.73%), Query Frame = 1
Query: 142 THPARSTAEVTQVGAGSPSPIMGRG-REVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSD-DLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQ 1248
T P S+ ++T GS + G +E+FSLAPMM+YTDRHMRFL+RLL+K VL+TEM+ S TI +N + +L R+LDY+E EHPVVLQ+GGSD + A A PY YDA+NLNCGCPSEKVAGKG FGAALMR V DLC M A + P+TVK RIGVDD+DSYE L F++ V + V HFI+HAR AILGGLSPA+NR IPPL++D+VY LVKD+P+ FT+NGGI YEE+R L +G HGVMVGR+ ++ P+ WSQ D +G +PGL RRE+LE Y EY + + +G + R+ L K + + F G++NGKKFR A++ L+R E P ++ + + L+ E +D PG+
Sbjct: 23 TKPTPSSMQMTSTDGGSYKTSLRNGQKELFSLAPMMDYTDRHMRFLMRLLSKDMVLYTEMIASGTIVNNPENELGRWLDYSESCEHPVVLQLGGSDPGELRRAAARAAPYRYDAVNLNCGCPSEKVAGKGCFGAALMREAELVGDLCRGM--AAELDCPVTVKSRIGVDDEDSYEGLCNFIETVADRSPVRHFIVHARTAILGGLSPAQNRQIPPLKYDYVYNLVKDYPEFQFTINGGITEYEEIREHLG---RGVHGVMVGRAINADPYKWSQVDELVYGAANPGLTRREILERYGEYCDEMVELWGPR---VRQTLKKHILNFFVGQRNGKKFRCAMDKLVRTELPLSKVFSNAAEILTDETLDAKPGE 385
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A7S2C7I3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I3_9STRA) HSP 1 Score: 332 bits (850), Expect = 1.730e-106 Identity = 181/349 (51.86%), Postives = 234/349 (67.05%), Query Frame = 1
Query: 226 FSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGL-NRREVLETYAEYGERQ-------EKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREE-RPFGEILEKSLQTLSQEQVDRLPG 1245
FS+APMM+YTDRH R+LLRLL+ + VL+TEMV + T+ HN D + R+L ++ VE+PVVLQ+GGSD + + + A YNYD INLNCGCPS+KVAGKG+FGA LM V LC AM G+ PITVKCRIGVDD DSYEQLA FV V + GV HFI+HARKAILGGLSP ENR IPP+++D VY+LV DFP + F++NG + TYE+V LS +G HGVMVGRS +PW WS+ DS+ +G + +RR+VLE YA+Y E++ + Y + +R + + +LF GE NG+KFRV L+ L R EIL+ + L E +D PG
Sbjct: 76 FSVAPMMDYTDRHFRYLLRLLSSKAVLYTEMVGASTLVHNPD-IDRWLRLSDDVENPVVLQLGGSDCEDLRTSVKRASAYNYDEINLNCGCPSDKVAGKGSFGATLMLDAKRVGQLCDAMAQECGK--PITVKCRIGVDDQDSYEQLAEFVGTVSQTGGVEHFIVHARKAILGGLSPEENRRIPPIKYDHVYQLVADFPSLRFSMNGEVKTYEDVSEHLS---RGLHGVMVGRSVIEQPWLWSEVDSRIYGLASDNVPSRRKVLEAYADYAEQEISRMLIKDPKYAPR---LKRAILRHTANLFRGEPNGRKFRVVLDQQLNTPGRSPHEILQTASGALFPETLDAGPG 415
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A2V3IQ37_9FLOR (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ37_9FLOR) HSP 1 Score: 306 bits (785), Expect = 9.510e-98 Identity = 168/362 (46.41%), Postives = 229/362 (63.26%), Query Frame = 1
Query: 244 MEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNE-GVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWY-WSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDP-RGSQEEKNVESLAVDPGCVS 1320
ME TDRH R L RL+++R L+TEMV T+ HN + L+ + + PVVLQ+GGSD + A R A + YD +NLNCGCPS KVAGKG FGAALMR P V D C MR+ E P+TVKCRIGVD+DDSY+QL FV V GV+HFI+HARKAILGGLSPA+NR+IPPLR+ VY L++DFP + F++NGG++T E+V L ++G +GVM+GR+ ++PW+ D +G + RR VLE Y EY +R+ + R L +P+ +LFHGEKNGKK+R ++ L+ PF IL ++L L +D +P P + +++E V +++ CVS
Sbjct: 1 MEVTDRHFRALARLISRRATLYTEMVVDRTLIHNERLRSLSLELPDLPAQQPVVLQLGGSDPAELECAARYAAQHGYDEVNLNCGCPSPKVAGKGCFGAALMREPHLVADACRRMREVLPEHVPVTVKCRIGVDNDDSYQQLCDFVSVVSERGGVSHFIVHARKAILGGLSPAQNRTIPPLRYQVVYDLIRDFPHLSFSINGGLHTVEDVNEQL---KRGVYGVMIGRAVMNRPWHALCDVDHAVYGD-GVVITRRGVLERYVEYAKRETS----RTCCSSRVLFRPLLNLFHGEKNGKKYRRLIDEGLKRNEPFERILREALDVLPSSVLDAIPPSLSAPAQATEKEHGVTAVS----CVS 350
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A7S0D9F4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D9F4_9EUKA) HSP 1 Score: 306 bits (785), Expect = 1.270e-96 Identity = 161/349 (46.13%), Postives = 226/349 (64.76%), Query Frame = 1
Query: 196 SPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAM-RDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILG-GLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDR 1236
SP + G E FS+APMM+YTDRH RFLLR++TK+ L+TEM+ S + H D R L Y++ +EHPV LQ+GGSD +++ + A PY YDAINLNCGCPS+KV+G+G+FGAALM+ P + LC +M + A +TP++VKCRIGVD++D Y L FV + GV HFIIHARKAIL LSP +NR IPPL++ +V+RLV DFP F LNGG+ + EE A L+ G GVMVGR ++PWYW D + FG ++P L+RRE+L Y+ Y + + ++ + KPV HLF GE+ + +R + L ++ EIL+ ++ + + +D+
Sbjct: 97 SPPLALG-ERFSVAPMMDYTDRHFRFLLRMITKKAWLYTEMITSEALIHGDAD--RLLRYHDPIEHPVALQLGGSDPDSLAKGVKKALPYAYDAINLNCGCPSDKVSGRGSFGAALMKEPDYTAVLCESMIQQAAATDTPVSVKCRIGVDENDDYHYLKQFVTAL-GDVGVRHFIIHARKAILNMNLSPKQNREIPPLKYQYVHRLVVDFPSYSFVLNGGVKSLEE---ADEFLKAGVAGVMVGREIINRPWYWGDVDRRLFGVENPRLSRREILGNYSAYAVVEMERDPRLGIST---VLKPVQHLFVGERGARAYRRTIAELSAKKVAVDEILKAAINCIGDQDLDQ 435
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A0G4ELS3_VITBC (tRNA-dihydrouridine synthase n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELS3_VITBC) HSP 1 Score: 305 bits (780), Expect = 1.850e-96 Identity = 169/354 (47.74%), Postives = 230/354 (64.97%), Query Frame = 1
Query: 226 FSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLA----------RFLDYN-EGVEHPVVLQIGGSDTTIVSEACRLARPYN-YDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQ-EKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLL-REERPFGEILEKSLQTLSQEQVDRLPG 1245
FS+APMM+YTD+H RFL+RLLT+ L+TEM+ + + + + A R L N E +E P VLQ+GGSD +++EA R A Y+ + +NLNCGCPSE+VAGKGAFGAALMR P+ V +LC AMR G G P TVKCRIGVDD DS+E+L F+ V AGV+HFIIH+RKAIL GLSP +NR IPPL +++VYRLV+ FP + FTLNGG+ TYE++ + GVMVGR+ +P+YWS+ DS+ +G + GLNRREVL Y Y + + E+ + + R L K +LF GE +K++ LE+L R + IL ++ + L + ++R PG
Sbjct: 21 FSVAPMMDYTDKHFRFLMRLLTRNATLYTEMMAANALHYTNRQAAADATADSMIPRSLATNAESIESPCVLQLGGSDPDVLAEASRTASAYHPFTELNLNCGCPSERVAGKGAFGAALMREPALVAELCKAMRQGGGR--PTTVKCRIGVDDQDSFEELQRFISTVAERAGVSHFIIHSRKAILTGLSPEQNRKIPPLIYEYVYRLVEGFPGLRFTLNGGVLTYEDIDMHFERCPT-LTGVMVGRAVLDRPFYWSEVDSRLYGRDNLGLNRREVLAAYGSYCDAEMERTDPSRQRSLRNLLLKHALNLFAGEPMSRKYKQRLEALRQRGDVSVSAILREAEEQLHEGVLERRPG 371
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: K3Y7H3_SETIT (Dus domain-containing protein n=6 Tax=Paniceae TaxID=147428 RepID=K3Y7H3_SETIT) HSP 1 Score: 302 bits (774), Expect = 4.430e-95 Identity = 175/418 (41.87%), Postives = 246/418 (58.85%), Query Frame = 1
Query: 79 APSAPMTLCLTRARCQRISSRTHPARSTAEVTQVGAGSPSPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYW-SQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDPRGSQEEKNVESLAVDPGCVSVPR 1329
AP +P R R +S P R+ + + AG P + FS+APMM++TD H R L RL+++ L+TEMV + TI H D+L RFL + E +HP+VLQIGGS+ +++A LA Y+YD INLNCGCPS KVAG G FGA LM P V D A+ A + P++VKCRIGVDD DSYE+L FVD+V + HFIIHARKA+L G+SPAENR +PPL++++ + L++DFP+V FTLNGGI T ++V ++ QGA GVMVGRS + PW DS+ +G ++RR++LE+Y YG+ YG R+ L KP+ HLFH E ++ +S LR K++++ +E +D +P D ++E+ + D + PR
Sbjct: 17 APGSPGAFL--RGRFSPLSPGARPCRAASSASVPAAGKHLPPL------FSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFPEE-QHPIVLQIGGSNLKNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDAMSAI--AANCDVPVSVKCRIGVDDCDSYEELCDFVDKVVSNSPTRHFIIHARKALLSGISPAENRKVPPLKYEYYFALLRDFPEVKFTLNGGITTIDQVSASI---RQGAQGVMVGRSAYNNPWNMLGHVDSEIYGKPTRCISRRQILESYQFYGDSIIGRYGPSRPNVRQ-LVKPLLHLFHSEPGNNLWKRKSDSALR--------YCKTVKSFLEETLDAIPDTVLDKPVTREQSVEKKYFADVDSLLPPR 411
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A1E5VB94_9POAL (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VB94_9POAL) HSP 1 Score: 302 bits (774), Expect = 4.430e-95 Identity = 169/386 (43.78%), Postives = 238/386 (61.66%), Query Frame = 1
Query: 82 PSAPMTLCLTRARCQRISSRTHPARSTAEVTQVGAGSPSPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYW-SQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDR 1236
P +P T R R + R+ P R+ + + AG P + FS+APMM++TD H R L RL+++ L+TEMV + TI H ++L RFL + E +HP+VLQIGGS+ +++A LA Y+YD INLNCGCPS +VAG G FGA LM P V D A+ A + P++VKCRIGVDD DSYE+L FV +V + +HFIIHARKA+L GLSPAENR++PPL++++ + L++DFP+V FTLNGGI T ++V ++ QGAHGVMVGR+ + PW D + +G ++RRE+LE+Y YG+ YG R+ L KP+ HLFH E ++ +S LR + LE++L T+ +D+
Sbjct: 18 PGSPGTFL--RGRFSPRTPRSLPCRAASSASAPAAGKHLPPL------FSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKNNLDRFLAFPEE-QHPIVLQIGGSNLENLAKATELANAYSYDEINLNCGCPSGRVAGHGCFGARLMFDPEFVGDAMSAI--AANCDVPVSVKCRIGVDDRDSYEELCEFVHKVVSKSPTSHFIIHARKALLSGLSPAENRTVPPLKYEYYFALLRDFPEVKFTLNGGITTVDQVSASI---RQGAHGVMVGRAAYNNPWNMLGHVDGEIYGKPTRCISRREILESYQVYGDSIIGQYGPSRPNVRQ-LVKPLLHLFHSEPGNNLWKRKADSALRYCKTVKSFLEETLDTIPDSVLDK 388 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12340.4789.1 >prot_M-pyrifera_M_contig12340.4789.1 ID=prot_M-pyrifera_M_contig12340.4789.1|Name=mRNA_M-pyrifera_M_contig12340.4789.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=461bp MMRLTAMSVSALAVMHSTRSFVLPFKAPSAPMTLCLTRARCQRISSRTHPback to top mRNA from alignment at M-pyrifera_M_contig12340:1647..6660- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12340.4789.1 ID=mRNA_M-pyrifera_M_contig12340.4789.1|Name=mRNA_M-pyrifera_M_contig12340.4789.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5014bp|location=Sequence derived from alignment at M-pyrifera_M_contig12340:1647..6660- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12340:1647..6660- >mRNA_M-pyrifera_M_contig12340.4789.1 ID=mRNA_M-pyrifera_M_contig12340.4789.1|Name=mRNA_M-pyrifera_M_contig12340.4789.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2766bp|location=Sequence derived from alignment at M-pyrifera_M_contig12340:1647..6660- (Macrocystis pyrifera P11B4 male)back to top |