mRNA_M-pyrifera_M_contig123236.4770.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A517PVN2_9PLAN (Type II secretion system protein G n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PVN2_9PLAN) HSP 1 Score: 144 bits (363), Expect = 9.130e-41 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1
Query: 1 HYHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
HY+PNWHGGDCLT NSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF
Sbjct: 262 HYNPNWHGGDCLTGNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 328
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: F0SHE0_RUBBR (Uncharacterized protein n=2 Tax=Rubinisphaera brasiliensis TaxID=119 RepID=F0SHE0_RUBBR) HSP 1 Score: 120 bits (300), Expect = 1.970e-31 Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 1
Query: 1 HYHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
H+ PNWHGGDCLT NS QALMGP SYH GGA ILLCDGHVRFIS+NI+ EL+++LATR+GGEV+GE+
Sbjct: 258 HFTPNWHGGDCLTGNSTQALMGPHSYHRGGAQILLCDGHVRFISENIDVELLRDLATRNGGEVVGEY 324
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A836W065_9PLAN (DUF1559 domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A836W065_9PLAN) HSP 1 Score: 87.4 bits (215), Expect = 5.470e-19 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 HYHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
+Y PN DCLT NS +A M PRSYH GG ++LLCDGHV F+SD+I+ ++M LATR+GGEV+ +
Sbjct: 260 YYPPNSKQADCLTGNSTRARMAPRSYHPGGVNVLLCDGHVSFLSDSISQDVMHALATRAGGEVVQAY 326
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A177R7P8_9PLAN (Uncharacterized protein n=1 Tax=Planctomyces sp. SCGC AG-212-M04 TaxID=1799657 RepID=A0A177R7P8_9PLAN) HSP 1 Score: 73.2 bits (178), Expect = 6.820e-15 Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 1 HYHPNWHGGDCLTRNSVQALMG-----PRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
+Y PN DC+T RS HTGG H+LLCDG RF+SDN++T + LATR+ GEV+GEF
Sbjct: 70 YYTPNIKRWDCITNAQAMGYTAIGWKAARSVHTGGVHLLLCDGSARFVSDNVDTNTWRGLATRANGEVLGEF 141
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A517VA75_9PLAN (Putative major pilin subunit n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VA75_9PLAN) HSP 1 Score: 75.5 bits (184), Expect = 1.530e-14 Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 HYHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
HY PN DC++ G S+HTGG I LCDG VRFIS+N+N EL Q L+TRSGGEV+GEF
Sbjct: 269 HYQPNQMVVDCVSNGMGFVKAG--SWHTGGVQIGLCDGSVRFISENVNHELWQALSTRSGGEVLGEF 333
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A3L7PIP8_9BACT (DUF1559 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PIP8_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 1.630e-14 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 10 PNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
PN DC ++ L RS HTGG H+LLCDG RF+SDNI+T + ++LAT++GGEV+G+F
Sbjct: 280 PNSSTFDCGNTSNNAGLTASRSRHTGGVHVLLCDGATRFVSDNIDTVIWRSLATKAGGEVVGDF 343
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A7C2NXU5_9PLAN (DUF1559 domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2NXU5_9PLAN) HSP 1 Score: 75.1 bits (183), Expect = 1.980e-14 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 4 YHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
Y+PN DC + L RS H GG H+ LCDG VRF+S+N++ ++ + LATRSGGEV+GEF
Sbjct: 258 YNPNSQQSDCGNASHNFGLTAARSRHEGGVHVTLCDGAVRFVSENVDLQVWRGLATRSGGEVLGEF 323
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A1C3E7S8_9PLAN (Uncharacterized protein n=1 Tax=Planctopirus hydrillae TaxID=1841610 RepID=A0A1C3E7S8_9PLAN) HSP 1 Score: 74.7 bits (182), Expect = 2.740e-14 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 4 YHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
Y PN + DC+ RS HTGG HILLCDG RF+S+NI+ ++ + LATR+G EV+ EF
Sbjct: 258 YSPNSNSPDCINSQGATGWSTARSMHTGGVHILLCDGSARFVSENIDLQIWRGLATRAGSEVLSEF 323
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A0A3L7NT36_9BACT (DUF1559 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NT36_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 3.470e-14 Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 4 YHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
Y P + GG + NS+ GP S H GGAH LLCDG VRFIS+NI+ L L +R+GGEV+GEF
Sbjct: 248 YQPYFQGG--VFPNSIGQKWGPSSQHVGGAHHLLCDGSVRFISENIDVVLYDGLTSRNGGEVVGEF 311
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Match: A6C9J6_9PLAN (Uncharacterized protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A6C9J6_9PLAN) HSP 1 Score: 73.2 bits (178), Expect = 1.070e-13 Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 HYHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTELMQNLATRSGGEVIGEF 201
+Y PN D + N L RSYHTGGA+++LCDG VRF+ D+I+ L + L TR GGEVIGEF
Sbjct: 268 YYTPNSDTADAI--NGSSKLTAARSYHTGGANVVLCDGSVRFVGDSIDVNLYRGLWTRGGGEVIGEF 332 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123236.4770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123236.4770.1 >prot_M-pyrifera_M_contig123236.4770.1 ID=prot_M-pyrifera_M_contig123236.4770.1|Name=mRNA_M-pyrifera_M_contig123236.4770.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp HYHPNWHGGDCLTRNSVQALMGPRSYHTGGAHILLCDGHVRFISDNINTEback to top mRNA from alignment at M-pyrifera_M_contig123236:2..205+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123236.4770.1 ID=mRNA_M-pyrifera_M_contig123236.4770.1|Name=mRNA_M-pyrifera_M_contig123236.4770.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig123236:2..205+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123236:2..205+ >mRNA_M-pyrifera_M_contig123236.4770.1 ID=mRNA_M-pyrifera_M_contig123236.4770.1|Name=mRNA_M-pyrifera_M_contig123236.4770.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig123236:2..205+ (Macrocystis pyrifera P11B4 male)back to top |