mRNA_M-pyrifera_M_contig123177.4757.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A7Y5C9U2_9BACT (PAS domain S-box protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C9U2_9BACT) HSP 1 Score: 130 bits (328), Expect = 3.540e-32 Identity = 91/290 (31.38%), Postives = 119/290 (41.03%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRD-------------MTVEFEA-------------------------------------------------------------------------------------------------------------RKEQERLLGELKERNKKITCLYSVGELIREQEVETDLFRSVTQVVRPACTFPEITRARIIFDGQVYEELSVVETPW 504
AA R+FG+ E++G NV +L P H YIA+Y ++GV++IIGIGREV + K+G P+HLSISEV +DG R F+G+ RD +T +EA +EQ+RLLGEL ERNKKITCLYSVG I + + DLF ++ Q++RPAC PE RAR+ +DGQ Y E V ETPW
Sbjct: 46 AALRLFGYEMDEVIGRNVSLLMPEPYRSAHSDYIASYRQSGVKKIIGIGREVAGRRKDGAVFPMHLSISEVTVDGRRLFTGITRDISREKKAEESLRALTFRYEAILAAAPDLIVEVDRNRKHVWMNQAALNFYGDDAIGREPADYFYGPQDTYETVSPLLEGLDETVYVESLQRRRDGEPRLLAWWCRCLRDSEGKVIGALSTARDITNRKRNEQEQKRLLGELTERNKKITCLYSVGRAIAAAKSDQDLFEALVQLIRPACYKPETARARVTYDGQQYAEPGVQETPW 335
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A7J0BLE1_9DELT (Uncharacterized protein n=1 Tax=Desulfovibrio subterraneus TaxID=2718620 RepID=A0A7J0BLE1_9DELT) HSP 1 Score: 109 bits (272), Expect = 1.530e-24 Identity = 63/136 (46.32%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMTVEFEARKEQERLLGELKERNKKITCLYSVGE-LIREQEVETDLFRSVTQ 405
AA MFG+T++ELLGENVR++TPP + HHD YI Y++ G+ RIIGIGREV A K+G +P+ LSISE+++ RYF+ ++RD++ RK E+ L EL E + S+ E LI E++ L SVT+
Sbjct: 286 AACTMFGYTQKELLGENVRLITPPEMRDHHDEYIRRYIKTGIPRIIGIGREVEAVRKDGVRMPIDLSISEIKVGAKRYFTAIIRDISE----RKFWEQQLMELNESLR--VKQRSINEALISAAEIQRSLLPSVTE 415
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A7C4XZX2_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XZX2_9HYPH) HSP 1 Score: 107 bits (266), Expect = 7.720e-24 Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMT----VEFEARKEQERLLGE 306
A + +FG++ EL+G+NV +L P HDGYIANYL +GV+RIIGIGREV Q K+G PVHLS+SE DG RYF+G++ D+T VE EA +E ER L +
Sbjct: 44 ATESLFGYSASELIGQNVSILMPEPYRSAHDGYIANYLASGVKRIIGIGREVSGQRKDGTTFPVHLSVSEFEADGRRYFTGIIHDLTDRRHVE-EALRESERRLAQ 148
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A345R9D3_9RHOB (Uncharacterized protein n=1 Tax=Sulfitobacter sp. JL08 TaxID=2070369 RepID=A0A345R9D3_9RHOB) HSP 1 Score: 107 bits (267), Expect = 8.420e-24 Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 10 RMFGFTRRELLGENVRMLTP-PHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMTVEFEARKEQER 294
RM G+TR E++G NV ML P PH S H DGYI++YLE G +IIG GR+V+A+HK+G +PVHL ++EV IDG R F G++RD+T E E+R+ E+
Sbjct: 1011 RMLGYTRSEMVGRNVNMLMPEPHHSAH-DGYISSYLETGEAKIIGTGRDVVARHKSGKPVPVHLKVAEVTIDGERQFIGIIRDLTEETESRRRLEQ 1105
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: UPI0009FC3273 (PAS domain S-box protein n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI0009FC3273) HSP 1 Score: 106 bits (265), Expect = 1.460e-23 Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMTVEFEARKEQERLLGEL 309
A + +FG+ E+LG+NV+MLTP I HHD YI NYL G ++IGIGRE AQHK+G P+ L+ISE+ G R+F G +RD+T A KE+E + +L
Sbjct: 467 ATKTLFGYDPHEVLGQNVKMLTPEGIREHHDDYITNYLNTGKAKVIGIGRETRAQHKSGSTFPIDLTISEIFTHGERFFVGTVRDLTERKNAEKERETFIAQL 569
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A3N5N5S9_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5N5S9_9HYPH) HSP 1 Score: 105 bits (261), Expect = 3.640e-23 Identity = 53/106 (50.00%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMT----VEFEARKEQERLLGE 306
A +R+FG+ EL+G+NV+ML P HDGY+ NYL GV++IIGIGREV + K+G P+HLS+SE DG RYF+GM+ D++ VE EA +E ER L +
Sbjct: 44 ATERLFGYGATELIGQNVKMLMPEPYKAEHDGYVTNYLGTGVKKIIGIGREVSGRRKDGTTFPLHLSVSEFSADGRRYFTGMIHDLSDRRHVE-EALRESERRLAQ 148
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: J9DT82_9RHOB (Histidine kinase n=1 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J9DT82_9RHOB) HSP 1 Score: 103 bits (257), Expect = 6.370e-23 Identity = 67/168 (39.88%), Postives = 92/168 (54.76%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMTVEFEARKEQERLLGELKE---RNKKITCLYSVGE-LIREQEVETDLFRSVTQVVRPAC-----TFPEITRARIIFDGQVYE 477
A +R+FG+T E+LG NV+ L P SR HD Y+ANY+E G R+IIGIGREV+AQH++G IPVHLS+ E R F G+LRD+ AR E + L +L+ R +++ + +G L E Q V AC T P T+ I + V+E
Sbjct: 58 ACERLFGYTAVEMLGRNVQTLMPNEYSRAHDRYVANYVETGQRKIIGIGREVLAQHRDGTIIPVHLSVGEAVTSAGRQFIGILRDLR----ARNESDERLNQLQANLVRMARVSAIDEMGAALAHELNQPLTALMLYLQAVERACAKQGATGPMPTQVLGILEKAVHE 221
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A1F3ZLS1_9PROT (Histidine kinase n=1 Tax=Betaproteobacteria bacterium RBG_19FT_COMBO_58_11 TaxID=1797480 RepID=A0A1F3ZLS1_9PROT) HSP 1 Score: 102 bits (255), Expect = 9.490e-23 Identity = 49/107 (45.79%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMTVEFEARKEQERLLGELKERN 321
AA+ +FG+ E+LG+NV +L P HDGY+ YL G +RIIGIGREV+AQ K+G P+ L++SE+R+ G R F+G++ D+T +A+ QE L+ EL+ N
Sbjct: 52 AAEHLFGYAPSEVLGKNVSLLMPSPYHEEHDGYLQRYLATGEKRIIGIGREVVAQRKDGTAFPIELAVSEMRVGGRRLFTGLVHDITQRKQAQARQEELIRELEGAN 158
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A3N2QMH8_9GAMM (EAL domain-containing protein n=2 Tax=Marinobacter TaxID=2742 RepID=A0A3N2QMH8_9GAMM) HSP 1 Score: 103 bits (257), Expect = 1.660e-22 Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMTVEFEARKEQERLLGELKERNKKI 330
AA+R+FG+ R E++G+NV+ L P +++RHHDGY+ NYL+ RIIG+GREV +HK+G P+HLS+ E +GHR F G+ D+T + R LGE +ER + I
Sbjct: 36 AAERLFGYRRDEVIGQNVKCLMPEYVARHHDGYLQNYLQGCPARIIGVGREVEGRHKDGSTFPLHLSVGEALHEGHRNFIGICHDLT----SYNAVLRQLGEAEERYRDI 141
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Match: A0A0L0SRK2_ALLM3 (PAS domain S-box protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SRK2_ALLM3) HSP 1 Score: 103 bits (257), Expect = 1.780e-22 Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 1
Query: 1 AAQRMFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAQHKNGDEIPVHLSISEVRIDGHRYFSGMLRDMT----VEFEARKEQERLLGELKERNKKITCLYSVGELIREQEVETDLFRSVTQVVRPACTFPEITRARI 453
AA++MFG++ E+LG+N++MLTP H++ HD ++ NYL GV+++IGIGR + K+G P+HLS+SEV+ + F+G++RD+T +E AR EQ R E++ LI + E RS+ Q + PA ++ R +
Sbjct: 650 AAEKMFGYSADEVLGKNIKMLTPDHVAVQHDQFLLNYLTTGVKKVIGIGRTAKGRKKDGSLFPIHLSVSEVKEEEFHLFTGIVRDLTEQNAIEEAARAEQARKQAEME-------------SLIAQLGTERTKSRSLIQEILPASIAEQLMRGEV 791 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123177.4757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123177.4757.1 >prot_M-pyrifera_M_contig123177.4757.1 ID=prot_M-pyrifera_M_contig123177.4757.1|Name=mRNA_M-pyrifera_M_contig123177.4757.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp MFGFTRRELLGENVRMLTPPHISRHHDGYIANYLENGVRRIIGIGREVMAback to top mRNA from alignment at M-pyrifera_M_contig123177:2..523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123177.4757.1 ID=mRNA_M-pyrifera_M_contig123177.4757.1|Name=mRNA_M-pyrifera_M_contig123177.4757.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig123177:2..523+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123177:2..523+ >mRNA_M-pyrifera_M_contig123177.4757.1 ID=mRNA_M-pyrifera_M_contig123177.4757.1|Name=mRNA_M-pyrifera_M_contig123177.4757.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig123177:2..523+ (Macrocystis pyrifera P11B4 male)back to top |