mRNA_M-pyrifera_M_contig123161.4754.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A7C1ULR2_9GAMM (ATP synthase subunit b n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1ULR2_9GAMM) HSP 1 Score: 124 bits (311), Expect = 5.510e-32 Identity = 81/173 (46.82%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERL 519
KRFLYKPVL++IA+RR +EK L +A+ + +AE LQ+ GR A ++ERQQAR+ L +E+E RA+++ L++ L+ EREK+R E RQ+ R E +AL ARFATRLLEQ S P++E RL+E+ L+QL IA LR+ E A+VTSA+ + Q +RL
Sbjct: 28 KRFLYKPVLDVIARRRAGIEKTLADAKALQADAERLQEQYQGRLADWDRERQQAREALGRELEAERARKMAELQTVLEQEREKARVAEARRQADAMRKIEETALVQGARFATRLLEQASGPDMEARLVELAITGLTQLPPERIAALRNSHGKAAEAAVVTSAFALADPQRQRL 200
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A8D4VTL2_9GAMM (ATP synthase subunit b n=1 Tax=Methylogaea oryzae TaxID=1295382 RepID=A0A8D4VTL2_9GAMM) HSP 1 Score: 120 bits (300), Expect = 2.190e-30 Identity = 77/174 (44.25%), Postives = 112/174 (64.37%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERLE 522
KR LYKPV +IIAQRR A+E LREA+D + +A+AL+ R A+ ++E+Q AR+ LRQEIE R +Q+ AL+ L AE EK+R++E+ +++ + E SA+ ARF +LLE+++ P+L RLLE++ L QL E A LR+GW + V SAY + Q RL+
Sbjct: 23 KRLLYKPVQDIIAQRRAAIEATLREADDKQAQAQALRTQYENRLAEWDKEKQAARETLRQEIEAERQKQMAALKDALAAELEKTRSVEERQRAETLQRLEESAVAQGARFCAKLLERLTGPDLHGRLLELLVAELEQLPEKRRAELRNGWRGQAPTVEVVSAYTLSDGQCARLQ 196
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A1E7IC12_9DELT (ATP synthase subunit b n=1 Tax=Desulfuromonadales bacterium C00003093 TaxID=1869308 RepID=A0A1E7IC12_9DELT) HSP 1 Score: 119 bits (298), Expect = 4.340e-30 Identity = 78/174 (44.83%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERLE 522
KRFLYKPVL++IA+RR +E L EA+ EA+ L+ R A +QERQQARD L QE+ + RA+Q+ L++ L EREK++ E R++ R E AL +A+FA RL + PELE RL +++ NLS LS IA L + W PE +V SAYP + +RLE
Sbjct: 23 KRFLYKPVLDVIARRRAGIEDRLTEAQRFHNEADTLKTEYENRLADWDQERQQARDALAQELNEERARQMEVLQTTLAQEREKAQVAESRRRAEAARGIEHHALQQSAQFAARLFTHAAGPELETRLFDLLVDNLSSLSSDQIAALSTQWGEPPEVIMVASAYPFTEDRRQRLE 196
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: UPI002002CBCB (F0F1 ATP synthase subunit delta n=1 Tax=Marinobacter koreensis TaxID=335974 RepID=UPI002002CBCB) HSP 1 Score: 118 bits (296), Expect = 8.420e-30 Identity = 77/173 (44.51%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERL 519
KRF Y+PV+ +IAQRR +EK + +A + +AE L++ GR + +ERQQARD L +E+E RA++L AL+ EL REK RA E+ RQ+ TR E++AL ARFAT LLEQ + PELE RL+++ T LSQL + + N V SAYP+ E L
Sbjct: 23 KRFFYRPVMQVIAQRRAEIEKTMTDARALEEKAEHLREQYEGRISAWREERQQARDALSRELETERARRLDALKQELGQAREKLRATEENRQAVATRAMESAALEQGARFATHLLEQAAGPELESRLIDLFTTQLSQLPPEKLESIHRQQANATPAVTVLSAYPLNEQTQEHL 195
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A1H3CZC2_9GAMM (ATP synthase subunit b n=2 Tax=Marinobacter mobilis TaxID=488533 RepID=A0A1H3CZC2_9GAMM) HSP 1 Score: 118 bits (295), Expect = 1.210e-29 Identity = 79/174 (45.40%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERLE 522
KRFLYKPVL +I QRR +E+ L E + + +A++LQ R A EQ+RQQ L QE++ RA+Q L+S+L+ EREK+R + +Q+ + R +E AL ARFA+RLLE + PELE RLL + LSQL +A R+RS W P LVTSAYP+ + LE
Sbjct: 23 KRFLYKPVLEVIDQRRKNIEQQLAEVQQQQAQAKSLQGRYQDRLADWEQQRQQLESALSQELQTERAKQSGVLQSQLEQEREKARRAIKHQQAEVIRQSEIRALHQGARFASRLLEAAAGPELEARLLSLTAEELSQLPDATRDRIRSQWGEPPSDILVTSAYPLAEKDRQPLE 196
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A661Q6M9_9DELT (ATP synthase subunit b n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661Q6M9_9DELT) HSP 1 Score: 115 bits (288), Expect = 1.340e-28 Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERLE 522
KRFLYKPVL++IA+RR +E L +A+ EA+ L+ R E ERQQA+D L QE+ + R ++L L + L E+ K++ + +Q+ I + E AL +A+FATRLL Q S PELE RL+ ++ NL+ LS+ I L + W +PE +V SAYP+P +Q LE
Sbjct: 23 KRFLYKPVLDVIARRRADIEDRLAKAQHLHDEADRLKAEYENRLVDWEHERQQAKDNLSQELNEERTRRLEQLHTTLKQEQNKAKVSQLQQQTKIAQALEHQALQQSAQFATRLLNQASGPELEARLIGVLLENLANLSQDQIKTLNTQWGRQPESIVVASAYPLPENQRTNLE 196
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A0S8D3E7_9PROT (ATP synthase subunit b n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8D3E7_9PROT) HSP 1 Score: 111 bits (278), Expect = 4.000e-27 Identity = 77/174 (44.25%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERLE 522
K FLYKPVL+IIA+RR A+EK EAE +AE LQ+ R A +ERQ+AR++L +EIE RAQ++ ++S L E EK R E RQ E +AL AA FATRLLEQ + PE+E RL++++ L+QL +A +R + P V+SA+P+ +RLE
Sbjct: 23 KHFLYKPVLDIIAKRRAAIEKTRAEAEALHTDAEKLQEQYQRRLADWSKERQKAREDLAREIEVQRAQKIADMKSVLQQEEEKVRVAESRRQIDALHKTEETALMQAATFATRLLEQAAGPEVEGRLVDMVIDELNQLPPDRVAEIRKSFEATPGEIQVSSAFPLSDDHRQRLE 196
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A496XH16_9GAMM (ATP synthase subunit b n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XH16_9GAMM) HSP 1 Score: 110 bits (274), Expect = 1.570e-26 Identity = 75/174 (43.10%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERLE 522
KRFLYKPVL++IA+RR +EK + +AE +AE LQ+ R A +QER QAR+ L +EIE R + + L+ L+ +++ + E RQ+ R E +AL ARFATRLLEQ S PE E RL+E++ L +L + IA LR+ + P +V SA+ +P Q +RLE
Sbjct: 23 KRFLYKPVLDVIARRRAGIEKSMADAEALHADAEKLQEQYEDRLAVWDQERLQAREALDREIEAERERAMAELQIALEEKQKMAGIAEARRQADAMRKFEETALKQGARFATRLLEQASGPETEARLVEMVLTELIKLPDEQIAALRNSYGKTPATVVVVSAFLLPGDQRQRLE 196
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A532DVS4_9BACT (ATP synthase subunit b n=2 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532DVS4_9BACT) HSP 1 Score: 105 bits (262), Expect = 9.380e-25 Identity = 72/172 (41.86%), Postives = 105/172 (61.05%), Query Frame = 1
Query: 4 RFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERL 519
RFLYKPVL +IAQR+ A++K +AE +AE L+ R A EQE+ +AR +LR EI R +QL ALR+ELD ER+K+ A+EQ R T+ E SA+ A FA+RLL ++ ELE R+++++ +L+ LS+ I +RS +TS YP+ +Q + L
Sbjct: 24 RFLYKPVLKVIAQRKTAIQKTQADAEQMWSDAETLRGQYENRLADWEQEKDKARAKLRDEISAERNRQLDALRTELDQERQKAAAVEQRRLKDFTQQTEISAIAQGATFASRLLSRLGGVELERRIIDLVVEDLAGLSQDKIRAIRSVPVTTGLAMRITSGYPLDTTQRKVL 195
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Match: A0A0S8DZ65_9GAMM (ATP synthase subunit b n=1 Tax=Gammaproteobacteria bacterium SG8_47 TaxID=1703406 RepID=A0A0S8DZ65_9GAMM) HSP 1 Score: 104 bits (259), Expect = 3.080e-24 Identity = 63/174 (36.21%), Postives = 112/174 (64.37%), Query Frame = 1
Query: 1 KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQERQQARDELRQEIEKLRAQQLVALRSELDAEREKSRAIEQGRQSAITRDAEASALTLAARFATRLLEQVSSPELEMRLLEIITRNLSQLSEADIARLRSGWTNEPEGALVTSAYPIPASQSERLE 522
KRFLY+PVLN+IA+R+ ++K L EAE + +A+ L++ R EQE+ +AR +L++E+++ R++++ +++ L+AER++S+ +EQ R R+AE +A+ + +FA RLL ++S PE++ RL+ ++ +L+ L EA R+ W V A P+ AS+ + LE
Sbjct: 23 KRFLYRPVLNVIARRKADIDKQLTEAEQTQAQADELRERYESRLGDWEQEKSEARRDLQRELDEERSKKVGEIQAALEAERQRSQVLEQRRGQEAVREAERTAMAQSTQFAARLLSRLSGPEVQARLITMLAEDLAGLPEARRERIAQIWQQGESNVRVVGAQPLTASEQQTLE 196 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123161.4754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123161.4754.1 >prot_M-pyrifera_M_contig123161.4754.1 ID=prot_M-pyrifera_M_contig123161.4754.1|Name=mRNA_M-pyrifera_M_contig123161.4754.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp KRFLYKPVLNIIAQRRGAVEKILREAEDAKREAEALQKSLAGRQAKSEQEback to top mRNA from alignment at M-pyrifera_M_contig123161:2..523+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123161.4754.1 ID=mRNA_M-pyrifera_M_contig123161.4754.1|Name=mRNA_M-pyrifera_M_contig123161.4754.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig123161:2..523+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123161:2..523+ >mRNA_M-pyrifera_M_contig123161.4754.1 ID=mRNA_M-pyrifera_M_contig123161.4754.1|Name=mRNA_M-pyrifera_M_contig123161.4754.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig123161:2..523+ (Macrocystis pyrifera P11B4 male)back to top |