mRNA_M-pyrifera_M_contig12306.4740.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12306.4740.1
Unique NamemRNA_M-pyrifera_M_contig12306.4740.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: D8LSM0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM0_ECTSI)

HSP 1 Score: 637 bits (1644), Expect = 1.130e-199
Identity = 491/1087 (45.17%), Postives = 576/1087 (52.99%), Query Frame = 1 
Query:    1 QGDTLAIDGSGWVFQLLEGQRVDHGGDYDLLHEAVVREVSRLRDAGLLLLVFKDGRSRKMKAVTRELRRENVAESFARLYGYTLDGGGAFVGAGVGPDRSVNSFPVPKMADAQFYASLRSLGVKVVECTGEADQEIAKASAADPTGRTFALGGDSDYFIFERCRYIHFRGLKVKPKIRGVMEEGAGLEARVWTRPRLAELCGIDEDQVVEWAILMGNDYTGHLSFGHLGVGGRNKGRPERTLEWIQARGPGFRVDAR--PPPRPAPFHKESGGSIAXXXXXXXXXEEAEAGVGAEEYPQEENGKEDSLPERYSKFFSNRGLTLPMGEG-----VDTPGRENGAGVTAAGSAEAGVETA-GAVVGVXXXXXXXXXXXXVPAXXXXXTEEASFSAELEAAQRAVSFSRALYALEPLDGFPDDSP-----EEEEDEAVAAEAGGGLPGLRSRGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHGR------------------------------------GARRGQQARAAA------PPPTRLDLVEAELQSELLSKPFGEAVLEALQRTVDQEEAV---------------------PGGG----GGRVWSRSGAWRAGEEDGR-EGERVEAGARRTALWGVALGKRMELPDGVRVKWADVLLSMRYQQNLLKAYRSRGLLDEDAAAASAASFTHSTAAVNDSGAVAAAVAVTSAPVPPDGFSSEKNADRPSRPPLVMPLDHFHGPSFHALLNDYRADNARPEMAGDGELEEDGAEAXXXXXXXXXXXXXAANDVADGSGGRGGGARSPPLTLPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAME--------------------------------------------------RGG-----------------------RRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVGSKRFPVRQ 2799
            +GDTLAIDGSGW+F LLEGQRVDHGGDYDLLH+ VVREV RLR AGL LLV+ DG +RKMKA TRE RR    E  A LY YTLDGGG+FVG G  PD S  +FP+PK+A  QFYASLR+ GVK+VEC GEADQEIAKASA D TGRTFA+G DSD+ IFERCRY+HF  L +  +  G  + G   +ARVWTR RLAELCGI E QVVEWAILMGNDYT  LSF  +G G   + RPE+TLE++Q+ GPG  +D R     R    + E GG+  XXXX       A+ G   E+                                     +D  G E G         E G E A  A   V             PA      E+A++         A+ FSRA+YALEPLD FPDD+        +EDE + A  G            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        G ++G   R+A        P TRLD+VEAELQ+ELL +P+G+AV EAL+RT++QEEAV                      GGG    G +VW+R+      EED R E ERVEA ARRTALW VA G R EL   VRVKW DVLLSMRYQ+NLL+ YR R   D            H TA                                                         + D+       D                                           + LPIDA+RE+IL+HVRNNRVTVIHGETGSGKS+R+PVML+E+A++                                                   GG                       +R +MFVSQPRRAATRAL QRVR+EA+ SG  W+V +RLGHGVREGP  AEVTFATTGY+ RL+A++PG+LDSHTHLIIDEVHERSVDTDLLC FAKRL+++HP LR+IVMSATLSA L+S YYGL++ PLFVGS+RFPVRQ
Sbjct:   25 EGDTLAIDGSGWMFHLLEGQRVDHGGDYDLLHKTVVREVGRLRQAGLKLLVYMDGPTRKMKAATRERRRGQDGEKLANLYAYTLDGGGSFVGPGQAPDLSAEAFPLPKLAQRQFYASLRTTGVKIVECPGEADQEIAKASAEDGTGRTFAVGSDSDFLIFERCRYVHFDDLVLHRREEGDGDGGGVAQARVWTRTRLAELCGISERQVVEWAILMGNDYTRELSFRVIGFGSHRRRRPEKTLEYVQSMGPGVTLDERIERTVRRKWRYGEGGGTSXXXXXAEDESGVADHGRANEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDEDGEEWG-------EKERGEEEALEASSAVMVSSGVSVGAADPPAPEEATYEKAAWGVTFVERATAMEFSRAMYALEPLDRFPDDAEVTGAGAADEDERLVAGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGMGPDEFLNKAGIGGRKKGLNLRSAPNIHQQKKPLTRLDVVEAELQAELLKRPYGDAVFEALRRTLEQEEAVVVRGGAAEGSGSLGTMTGSDNSGGGDVVTGDKVWNRAPGVSDEEEDLRLEFERVEAAARRTALWAVARGHRKELAADVRVKWPDVLLSMRYQKNLLRMYREREAQDN-----------HETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPDDLSSPPVDDA-----------------------------------------AVPLPIDAYREEILEHVRNNRVTVIHGETGSGKSTRIPVMLVEEALDLIAEEAAAVAEXXXXXXXXXXXXXXXXXXXXXXXXSGTTGSGGGEEVGVQAGGEGXXXXXXXXXXXXXXXAAAPQVKRPRMFVSQPRRAATRALVQRVRQEAERSGRGWSVGLRLGHGVREGPPKAEVTFATTGYLARLLASNPGVLDSHTHLIIDEVHERSVDTDLLCLFAKRLVETHPTLRLIVMSATLSANLLSKYYGLTSSPLFVGSRRFPVRQ 1052
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A6H5KLV6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV6_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 9.110e-101
Identity = 262/613 (42.74%), Postives = 315/613 (51.39%), Query Frame = 1 
Query: 1486 PPTRLDLVEAE-----------LQSELLSKPFGEAVLEALQRTVDQEEAVPGGGGG-------------------------RVWSRSGAWRAGEEDGR-EGERVEAGARRTALWGVALGKRMELPDGVRVKWADVLLSMRYQQNLLKAYRSRGLLDEDAAAASAASFTHSTAAVNDSGAVAAAVAVTSAPVPPDGFS-----------------------------------SEKNADRPSRPPLVMPLDHFHGPSFHALLNDYRADNARPEMAGDGELEEDGAEAXXXXXXXXXXXXXAANDV-------------------------ADGSGG--RGGGARSPPLT-----LPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAME---------------------------------------------------------------RGG--------RRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVGSKRFPVRQ 2799
            P TRLD+VEAE            ++ELL +P+G+AV EAL+RT++QEEAV   GG                          R+W+R+      EED R E ERVEA ARRTALW VA G R EL D VRVKW DVLLSMRYQ+NLL+ YR R  +D   A                                                                        S  +A+       +MP DHFHGP+FHALLN+YR +N                  XXXXXXXXXXXXX                              AD +GG  +   A SPP+      LPIDA+RE+IL+HVRNNRVTVIHGETGSGKS+R+PVML+E+A++                                                                GG        +R +MFVSQPRRAATRAL +RVR+EA+ SG  W+V +RLGHGVREGP  AEVTFATTGY+ RL+A++PG+LDSHTHLIIDEVHERSVDTDLLC FAKRL+++HP LR+IVMSATLSA L+S YYGL++ PLFVGS+RFPVRQ
Sbjct:  294 PLTRLDVVEAEHGEPRRRGSPVAKAELLKRPYGDAVFEALRRTLEQEEAVVVRGGAAEGSGSLGTXXXXXXXXXGDVITGDRIWNRAPGVSDEEEDLRLEFERVEAAARRTALWAVARGHRKELADDVRVKWPDVLLSMRYQKNLLRMYREREAVDNHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSCSAE------FIMPRDHFHGPTFHALLNEYREENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRGNTGGADAAGGMTQPNDASSPPVVDAAVPLPIDAYREEILEHVRNNRVTVIHGETGSGKSTRIPVMLVEEALDLIAEEAAAVAEAVREGAXXXXXXXXXXXXXXXXXXKNXXXXXXEAGVXXXXXXXXXXXXAESPAGGIAAAAPQVKRPRMFVSQPRRAATRALVERVRQEAERSGRGWSVGLRLGHGVREGPPKAEVTFATTGYLARLLASNPGVLDSHTHLIIDEVHERSVDTDLLCLFAKRLVETHPTLRLIVMSATLSANLLSKYYGLTSPPLFVGSRRFPVRQ 900
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A8J2X0N8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0N8_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.950e-48
Identity = 102/189 (53.97%), Postives = 137/189 (72.49%), Query Frame = 1 
Query: 2227 LTLPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMERGGRRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVGSKRFPV 2793
            + LPIDAH +KI +HV  +RVTVIHGETG GKSSR+P++L+E   +     AKMFVSQPRR A RAL  RVR+   +     ++A+RLGHGVR+    A + F T GY+VRL+A+ P  L  H+H+I+DEVHER+VD D+LC   +RL+D+ P L+V++MSATL+  L  +Y+  S LP+FVG+KRFPV
Sbjct:    1 MALPIDAHADKIAEHVARHRVTVIHGETGCGKSSRVPLILLEADPD-----AKMFVSQPRRIAARALCDRVRDTHSDPD---DIALRLGHGVRDEALDARIIFVTCGYLVRLVAHHPESLREHSHVIVDEVHERTVDADILCLLVRRLLDASPRLKVVLMSATLAGELYCSYFR-SPLPIFVGAKRFPV 180
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A7S3JYC1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYC1_9STRA)

HSP 1 Score: 196 bits (499), Expect = 7.090e-48
Identity = 102/185 (55.14%), Postives = 135/185 (72.97%), Query Frame = 1 
Query: 2233 LPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMERGGRRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVGSKRF 2787
            LPIDAH++KIL+HV  NRVT+I GETGSGKSSRLPVML+        ++ +MFVSQPRR A ++L +RVR +         + +RLGHG R+  +   V F TTGY+VRLIA+SP +L  HTHLIIDEVHERSVD +++C  A+RL+ SHP+LR+IVMSATL   L+++Y+      +FVG++RF
Sbjct:  510 LPIDAHQDKILEHVARNRVTIIIGETGSGKSSRLPVMLLN-----ANKKNRMFVSQPRRIAAKSLCERVRSQVSNG---HEIGLRLGHGERDEYKETRVWFCTTGYLVRLIASSPQVLRRHTHLIIDEVHERSVDAEVICLLARRLIHSHPNLRLIVMSATLCTELLADYFCTVEPHVFVGARRF 686
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: K0RU78_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU78_THAOC)

HSP 1 Score: 196 bits (498), Expect = 1.450e-47
Identity = 99/193 (51.30%), Postives = 136/193 (70.47%), Query Frame = 1 
Query: 2233 LPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMERGGRRA---KMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVRE-GPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVGSKRFPVRQ 2799
            LPID H  +IL+ VR  R+T+IHGETG GKSSR+P ML+  +       A   KM VSQPRR A +ALA+RVR    +   K  + +R+GHG+RE   +     F TTGY+VRL+AN PG  D+H+HLIIDEVHERSVDTD+LC   +RL++SHP +R+++MSAT++A L   Y+G+   P+ VG++RFP+++
Sbjct:  662 LPIDEHEGEILRAVRTQRITIIHGETGCGKSSRVPCMLLRASPPEPTATAPEVKMIVSQPRRIAAKALAERVRSCEPDLADK--IGLRMGHGIREYETKDTRAWFVTTGYVVRLLANHPGWFDTHSHLIIDEVHERSVDTDILCLLCRRLLNSHPTIRLVLMSATMAAELYQQYFGVPQPPIHVGARRFPIKE 852
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A7S2SUV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUV2_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.490e-47
Identity = 99/194 (51.03%), Postives = 128/194 (65.98%), Query Frame = 1 
Query: 2227 LTLPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLI-------EDAMERGG----RRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVG 2775
            + LPI  H + I  HV ++R+T+IHGETG GKSS +P+ML+       ED   RG     + AKMFV+QPRR A R+L QRVR+ +KE      V +RLGHG R+      V FAT GY+  L+A+       HTHLIIDEVHERS+DTD+LC  A+RL+ SHP LR+I+MSAT++A L   Y+G+   PLFVG
Sbjct:   68 VRLPIHDHEDTICNHVADHRITIIHGETGCGKSSTVPLMLLRHHDARREDKAFRGDPMYKKPAKMFVTQPRRIAARSLCQRVRQVSKEPD---LVGLRLGHGERDEKSQTRVWFATVGYVALLLAHHQEKFRDHTHLIIDEVHERSIDTDILCLLARRLLASHPTLRLILMSATIAAELHRQYFGVPEPPLFVG 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A7S4MMP8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MMP8_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.380e-46
Identity = 99/193 (51.30%), Postives = 135/193 (69.95%), Query Frame = 1 
Query: 2233 LPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMER---GGRRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGP-RGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVGSKRFPVRQ 2799
            LPID H E+IL+ +   RVT+I GETG GKSSR+PVML+           R  KMF+SQPRR A ++LA+RVR+   +   +  +A+R+GHGVRE         F TTGY+VRL+AN P    SHTHLIIDEVHERSVDTD+LC   +RL+ +HP +R+++MSAT++A L  +Y+G    P+FVG++RFP+++
Sbjct:  669 LPIDEHEEEILRTIAEQRVTIIQGETGCGKSSRVPVMLLRAPPPEPTSNARSVKMFISQPRRIAAKSLAERVRQCEPDL--RDCIALRMGHGVREYECPSTRAWFVTTGYLVRLLANHPKSFTSHTHLIIDEVHERSVDTDILCLLCRRLLTTHPTIRLVLMSATMAAALYRSYFGTPEPPIFVGARRFPIKE 859
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A7S2L2B3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L2B3_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.920e-45
Identity = 100/195 (51.28%), Postives = 134/195 (68.72%), Query Frame = 1 
Query: 2227 LTLPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMERGGRRA---KMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVRE-GPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLSTLPLFVGSKRFPVRQ 2799
            L LPID H  +IL  ++  RVT+IHGETG GKSSR+P  L+     +    A   KM VSQPRR A +ALA+RVR+   +   K  +A+R+GHG++E   +     F TTGY+VRL+AN P   DSHTHLIIDEVHERSVD+D+LC   +RL+ SHP +R+++MSATL+A L S Y+G +  P+ VG +RFP+ +
Sbjct:  316 LVLPIDKHEREILNTIKTQRVTIIHGETGCGKSSRVPCFLLRAEPPQPSLAAPEVKMIVSQPRRIAAKALAERVRKVEPDLAHK--IALRMGHGMKEFETQKTRAWFVTTGYVVRLLANHPHWFDSHTHLIIDEVHERSVDSDILCLLCRRLLHSHPTIRLVLMSATLAADLYSQYFG-APQPIHVGVRRFPINE 507
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A8J2SN25_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN25_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.320e-45
Identity = 113/265 (42.64%), Postives = 149/265 (56.23%), Query Frame = 1 
Query: 2011 PLDHFHGPSFHALLNDYRADNARPEMAGDGELEEDGAEAXXXXXXXXXXXXXAANDVADGSGGRGGGARSPPLTLPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMERGGRRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNYYGLS--TLPLFVGSKRFPVRQ 2799
            P + +HGP FHAL    R   A P           G                 AN                P  LPIDAHR +IL  +  NRVT++ GETG GKSSRLP+ML+E+  +     AKMFVSQPRR A RAL  RVR+   E      V +RLG G R+  R   + F +TGY+VRL+A  P  L +HTH+I+DEVHERSVDT++LC   +RL+  HP +RV++MSAT+   L ++Y+G+   T  L VG++R+PV +
Sbjct:  398 PRNLYHGPGFHALCRKLRGRAAPPP----------GLSPQTTPTTPPGLRKALAN---------------VPAQLPIDAHRLEILDTIARNRVTIVCGETGCGKSSRLPLMLLENDSK-----AKMFVSQPRRIAARALCDRVRQSLGEE-----VGLRLGFGERDESRKTRLWFCSTGYLVRLVAAHPQALKTHTHIIVDEVHERSVDTEILCLLLRRLVQEHPTIRVVLMSATVCVDLYASYFGVDPRTSSLHVGARRYPVTE 627
[Close]
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Match: A0A7S3GZ88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ88_9STRA)

HSP 1 Score: 173 bits (439), Expect = 6.550e-45
Identity = 95/194 (48.97%), Postives = 129/194 (66.49%), Query Frame = 1 
Query: 2233 LPIDAHREKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMERGGRRAKMFVSQPRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVIVMSATLSARLVSNY---YGLSTLP----LFVGSKRFPV 2793
            LP+DAHRE IL+H+++NRVT+IHGETG GKSSRLP  L++DA E   R  K+FV+QPRR     + +R+R    +      V +R+GHGVR+     +V + TTGY+V+L+A+ P  L   TH++IDEVHERSVD DL+C   + L+  +  LRVI+MSAT++ +L  +Y   Y   T      LFVG KRFPV
Sbjct:   84 LPVDAHRETILRHIKSNRVTIIHGETGCGKSSRLPQFLLDDA-EASNRPCKIFVAQPRRIGVVGMLKRLRPALGDK-----VGIRMGHGVRDETAETKVHYVTTGYLVQLVAHHPEALKRCTHIVIDEVHERSVDGDLICLLVRDLLLEYSQLRVILMSATINTKLYQDYFSQYDDGTFGRMDGLFVGVKRFPV 271
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12306.4740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSM0_ECTSI1.130e-19945.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KLV6_9PHAE9.110e-10142.74Helicase ATP-binding domain-containing protein n=1... [more]
A0A8J2X0N8_9STRA1.950e-4853.97Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JYC1_9STRA7.090e-4855.14Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K0RU78_THAOC1.450e-4751.30Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2SUV2_9STRA2.490e-4751.03Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4MMP8_9STRA2.380e-4651.30Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2L2B3_9STRA1.920e-4551.28Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A8J2SN25_9STRA3.320e-4542.64Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3GZ88_9STRA6.550e-4548.97Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12306contigM-pyrifera_M_contig12306:239..6700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score647.1
Seed ortholog evalue1.2e-182
Seed eggNOG ortholog2880.D8LSM0
Preferred nameYTHDC2
KEGG koko:K14442,ko:K20099
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
EggNOG free text desc.positive regulation of polysome binding
EggNOG OGsCOG1643@1,KOG0921@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019,ko03041
Exons8
Model size2799
Cds size2799
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12306.4740.1prot_M-pyrifera_M_contig12306.4740.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12306 239..6700 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815749.7301378-CDS-M-pyrifera_M_contig12306:238..4211622815749.7301378-CDS-M-pyrifera_M_contig12306:238..421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 239..421 -
1692277551.5780416-CDS-M-pyrifera_M_contig12306:238..4211692277551.5780416-CDS-M-pyrifera_M_contig12306:238..421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 239..421 -
1622815749.7395003-CDS-M-pyrifera_M_contig12306:751..16061622815749.7395003-CDS-M-pyrifera_M_contig12306:751..1606Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 752..1606 -
1692277551.6005971-CDS-M-pyrifera_M_contig12306:751..16061692277551.6005971-CDS-M-pyrifera_M_contig12306:751..1606Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 752..1606 -
1622815749.7514722-CDS-M-pyrifera_M_contig12306:2543..31491622815749.7514722-CDS-M-pyrifera_M_contig12306:2543..3149Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 2544..3149 -
1692277551.608493-CDS-M-pyrifera_M_contig12306:2543..31491692277551.608493-CDS-M-pyrifera_M_contig12306:2543..3149Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 2544..3149 -
1622815749.7649136-CDS-M-pyrifera_M_contig12306:3212..36471622815749.7649136-CDS-M-pyrifera_M_contig12306:3212..3647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 3213..3647 -
1692277551.6166303-CDS-M-pyrifera_M_contig12306:3212..36471692277551.6166303-CDS-M-pyrifera_M_contig12306:3212..3647Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 3213..3647 -
1622815749.7753658-CDS-M-pyrifera_M_contig12306:4362..45451622815749.7753658-CDS-M-pyrifera_M_contig12306:4362..4545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 4363..4545 -
1692277551.6244464-CDS-M-pyrifera_M_contig12306:4362..45451692277551.6244464-CDS-M-pyrifera_M_contig12306:4362..4545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 4363..4545 -
1622815749.7856107-CDS-M-pyrifera_M_contig12306:4796..49531622815749.7856107-CDS-M-pyrifera_M_contig12306:4796..4953Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 4797..4953 -
1692277551.6327608-CDS-M-pyrifera_M_contig12306:4796..49531692277551.6327608-CDS-M-pyrifera_M_contig12306:4796..4953Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 4797..4953 -
1622815749.798433-CDS-M-pyrifera_M_contig12306:5417..56651622815749.798433-CDS-M-pyrifera_M_contig12306:5417..5665Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 5418..5665 -
1692277551.6416702-CDS-M-pyrifera_M_contig12306:5417..56651692277551.6416702-CDS-M-pyrifera_M_contig12306:5417..5665Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 5418..5665 -
1622815749.810605-CDS-M-pyrifera_M_contig12306:6568..67001622815749.810605-CDS-M-pyrifera_M_contig12306:6568..6700Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 6569..6700 -
1692277551.6511288-CDS-M-pyrifera_M_contig12306:6568..67001692277551.6511288-CDS-M-pyrifera_M_contig12306:6568..6700Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12306 6569..6700 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12306.4740.1

>prot_M-pyrifera_M_contig12306.4740.1 ID=prot_M-pyrifera_M_contig12306.4740.1|Name=mRNA_M-pyrifera_M_contig12306.4740.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=933bp
QGDTLAIDGSGWVFQLLEGQRVDHGGDYDLLHEAVVREVSRLRDAGLLLL
VFKDGRSRKMKAVTRELRRENVAESFARLYGYTLDGGGAFVGAGVGPDRS
VNSFPVPKMADAQFYASLRSLGVKVVECTGEADQEIAKASAADPTGRTFA
LGGDSDYFIFERCRYIHFRGLKVKPKIRGVMEEGAGLEARVWTRPRLAEL
CGIDEDQVVEWAILMGNDYTGHLSFGHLGVGGRNKGRPERTLEWIQARGP
GFRVDARPPPRPAPFHKESGGSIAGGGGGDDQREEAEAGVGAEEYPQEEN
GKEDSLPERYSKFFSNRGLTLPMGEGVDTPGRENGAGVTAAGSAEAGVET
AGAVVGVGEGEGAAATAAAVPAGAAAATEEASFSAELEAAQRAVSFSRAL
YALEPLDGFPDDSPEEEEDEAVAAEAGGGLPGLRSRGAEGASGGVGGGGY
AGGNRHTRRLRKKRGARKGLAGGGGFGGDHGRGARRGQQARAAAPPPTRL
DLVEAELQSELLSKPFGEAVLEALQRTVDQEEAVPGGGGGRVWSRSGAWR
AGEEDGREGERVEAGARRTALWGVALGKRMELPDGVRVKWADVLLSMRYQ
QNLLKAYRSRGLLDEDAAAASAASFTHSTAAVNDSGAVAAAVAVTSAPVP
PDGFSSEKNADRPSRPPLVMPLDHFHGPSFHALLNDYRADNARPEMAGDG
ELEEDGAEAEVEGGAGSGVGVGAANDVADGSGGRGGGARSPPLTLPIDAH
REKILKHVRNNRVTVIHGETGSGKSSRLPVMLIEDAMERGGRRAKMFVSQ
PRRAATRALAQRVREEAKESGGKWNVAMRLGHGVREGPRGAEVTFATTGY
IVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLMDSHPDLRVI
VMSATLSARLVSNYYGLSTLPLFVGSKRFPVRQ
back to top

mRNA from alignment at M-pyrifera_M_contig12306:239..6700-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12306.4740.1 ID=mRNA_M-pyrifera_M_contig12306.4740.1|Name=mRNA_M-pyrifera_M_contig12306.4740.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6462bp|location=Sequence derived from alignment at M-pyrifera_M_contig12306:239..6700- (Macrocystis pyrifera P11B4 male)
CAGGGCGATACGCTAGCAATCGATGGGTCGGGGTGGGTGTTCCAACTCTT
GGAAGGCCAACGCGTCGACCATGGCGGGGACTACGACCTTCTCCATGAAG
CGGTCGTGCGCGAGGTCTCACGACTCCGCGACGTGAGTAGATCTAGGATC
CGAAGTTGGGGGAAGGGGAAGGGGGGGAGGTGTATCGGTTTCTTGGTATC
TGGGGAAAACGTGATGTTTCCTGTGTTTCGCAACGATCTCGCCCTTTGTT
CGTCGTAGCGTGATCTCACCTGTGTTTATTCACAGAGCGTGAACATGTGA
CGCGAGCTGTCTCGAATTGGCAGGCGAACCCATAGGCTCTCTACTGCCTC
CTTCTCTTGGTCCTGGGAACACCCGACGGGTACGTGCGGCATGATATATA
TATATCCTTTTGTTCAAGTCATCTTGTCCTCGACACGAGATTGCATGTTT
CTATACTATACTGGTGAACCTTTTGGGACTCAAGTAGTGTCTGATAGTAG
TATATTAGTATCTGTAGTGTGGTTGCACATCAGCAGTAAGAGTAGCATCA
TGGTGCGGGACAAAGAAAATGTTGTCACGCAACCGCAATTTAAACTCTTT
GCACTGCGGTGCGGCCTTGCGCTACGGTGCGAACACAAAAAAAGTGTAAT
GCCCTATCCCAGAGCAGCCCCGGTTGCTTCGTATGGGCGATGCCTGATGA
TCCCGTCGTCGTTTCTTGTTATCTCTTCTTCCCCCCAAAGAGCAGCCCGG
GTTGCTTCGTATGGGCGATGCCTGATGCCCTCGTCGTTACTTCTTGTGAT
CCCTTCTCCCCCCTCAAAGCCCGTGTCAACACGCCGACACATTGAAACCC
CTCACATACCCTCGCCAAAAATCCCCACAGGGTAAACAACGTGAGCGCGT
CTTCATATTGAAACCCCTCCTCTCCCCTCCCCTCCCCTCCCCCCTCAATT
CTCAAGAGGGTGAACACGTTAACGCATCGACACGTCAACACGTTGACCCC
CCCCCTCCCCCCTACTTGAAATGGGAATGCCTCAGGCGGGGCTTTTGCTC
TTGGTATTCAAGGACGGCCGCAGCCGCAAGATGAAGGCCGTGACGAGAGA
GCTTCGGAGGGAGAACGTTGCCGAGAGTTTCGCTCGGCTGTACGGGTACA
CTCTGGATGGCGGGGGCGCGTTCGTGGGCGCGGGGGTGGGCCCCGACCGC
AGCGTTAACTCTTTCCCGGTCCCCAAGATGGCGGACGCGCAGTTCTACGC
GTCGCTGCGCTCCTTGGGGGTGAAGGTGGTCGAGTGAGTTGCAGACGTTG
CTCTCTATAAACCACTCTGGCATGACGCTGTTTTTGTTACTGCTATTTTT
GATATTTTTGTTTCTGTTATGGGAGAAAGAAGGTAGCTGTGGAATCACGC
ACCTGGTACCTTCTCTGAAGTGGGGTTCGCGTTGATACCAGTGTTCCTTT
TGGTTTGGAGACACTCGACTACAGCACGTAGCCACTACTCTGACGGATCG
GCCATACAGAAGTATCCAGAAACCTCTATATGAACTCCCAAACCATGTAT
TCCCTATGCTTACACGGCGTATTTGGCTCTGATTTACTATTTCCCTCGCT
GTAATAGTGTACGCTTTCTTCGATATGCAGTGCTGCTGCCTTGCAGCACC
CGACGTTGCTGTGCTGGCTGCAACCGGAAGATGTCGATGCCGGTTGTTGT
AACAATCGCGGCGTCCCGTTCTCCTCGACCCCGTCGAAACCGCGAAGGTG
CACCGGCGAGGCGGACCAGGAGATTGCCAAAGCTAGCGCGGCAGACCCGA
CGGGGAGAACTTTCGCCTTGGGGGGCGACAGCGACTACTTTATCTTCGAG
CGCTGCCGTTACATCCACTTCCGCGGCCTGAAGGTAAAACCAAAAATTCG
CGGAGTTTGACGCAACCGCCAACTAGGCTTTCCAAACCTGCACGGCGTTT
TTTTCTCTCGTAATACGTACTGCTGTAGCTGTGGTTTTCCCCCCCTCTCT
CTTACATATCATACTTGGCCGTATTGTTTTTTTTTTGTTTCTCCTCGTGT
GTTTCGTTTCTAAACCCTTGCTTTCGGTCTTTCTTTTGCGTACCCCCCCT
CCCCCTCCCCCATGCGCGATGCCCCTTCTCTATTTCCCGCGCCCTTGTCC
GCCAGGTGATGGAAGAAGGAGCCGGATTAGAGGCGCGCGTCTGGACTCGC
CCGCGGCTGGCAGAACTCTGCGGCATAGATGAGGACCAGGTGGTGGAGTG
GGCCATACTCATGGGGAACGATTACACGGGCCACTTGTCGTTTGGGCACC
TGGGTGTGGGCGGGCGCAACAAGGGAAGACCTGAGAGGGTGGGTGGGGGC
GTTTGCGAAGAACGAGGGAGGCAGCGGAGGGGGGGGGTTGGGCGGTTGGG
GGTAGGGGTCAGGTGGGGGATGGAGAGGGAGATGCGTCCATGTTTTTTTT
ATTCGCTTTGTTACGTAGTTACCGCGAGTAGCTGATATAGGAGAGTATTG
CCCAAGGCTGTTGGCGGGCAGGGGAGCCTAGTGAGAGTGGGGGGGGCATT
GGGGGTGCAATGGGGGGGGGGGGGGAGAGGAGGAGGCAAAGCGCGAGATT
TCGCGATTTTGATACCCCTGGCTGCTGGATTTGAGAGCCATCGATGAGGC
GTTATCGAAGGTGGGTAGGCGTGTGTGTTTTGGCGGGACCTCTGGCGAGT
GAAACCGGTCTACCCATTCGAGGCGAGCGAAAAAGCGACTATGAAGGCGT
GCGAGTTCGACGTGGTGGAAGTTGGAGGTGGTTGGAGTGAGGGCGGTCGG
AGGCGTAAACGGGACGGAACGAGCGAGATACACAGCTTCAACGGGATGCT
GAGGGATGTTTCGCTAGGTCTCGGCGTTTACGAGTAATGGCAGCTTTCTT
CCCGATTTATGTTTTATTCCTGCGGTGTTGCCCCCGACCGCACATCCCCC
GCTAAGCCGTGTCCACCGCGTCTGTTCCCGCGTTATTTCTTTCTCCACTC
CCCGCGCTTCCTTTTGCCTGTATATACGGCCTGGTGGTACGCCGCCATCC
CAGACGCTCGAGTGGATCCAGGCCCGGGGGCCCGGCTTCAGGGTTGATGC
CAGGCCTCCCCCGCGGCCTGCTCCGTTCCATAAGGAAAGCGGCGGCAGCA
TCGCTGGCGGCGGTGGCGGCGACGACCAAAGAGAAGAAGCAGAAGCAGGC
GTAGGAGCGGAAGAGTACCCGCAAGAAGAGAATGGCAAGGAAGATTCTTT
GCCGGAACGATATTCGAAGTTTTTTTCAAATAGAGGGCTCACGCTGCCGA
TGGGCGAGGGGGTGGACACGCCGGGACGGGAAAATGGCGCAGGAGTGACT
GCAGCCGGGAGTGCAGAGGCGGGGGTGGAGACGGCGGGGGCAGTGGTGGG
GGTGGGGGAGGGAGAGGGGGCAGCAGCAACAGCGGCAGCAGTGCCAGCAG
GAGCAGCAGCAGCGACGGAGGAGGCGTCGTTCTCGGCGGTTGAGGCTGAG
GCGGCGGAGGGAACGGCAGAGGGAGAAATGAAAGCGGCGCGGTCCCAAGA
GGAGCTGGAGGCGGCCCAGCGCGCGGTAAGCTTCTCCCGGGCGCTGTACG
CGCTCGAGCCTCTCGACGGGTTCCCGGACGACTCGCCCGAGGAGGAGGAG
GACGAGGCCGTCGCCGCGGAAGCTGGGGGAGGGCTCCCGGGGCTTCGGAG
CCGGGGCGCGGAGGGCGCCAGCGGAGGAGTAGGGGGAGGAGGATACGCTG
GCGGTAACCGGCACACGAGGCGCTTGAGGAAGAAGCGCGGCGCCCGCAAA
GGCCTCGCCGGCGGGGGTGGGTTCGGCGGTGACCACGGGAGAGGGGCCCG
GCGGGGGCAGCAGGCGAGGGCGGCGGCGCCGCCACCCACGAGGTTGGACT
TGGTAGAGGCGGAGCTCCAGTCGGAGTTGCTGTCGAAGCCGTTCGGGGAA
GCCGTGCTGGAGGCGCTGCAGCGGACGGTGGACCAAGAGGAGGCCGTCCC
GGGGGGGGGAGGGGGGCGGGTTTGGAGTCGGAGCGGCGCGTGGAGGGCGG
GGGAGGAGGACGGCCGGGAGGGCGAGCGCGTCGAGGCCGGCGCGCGACGG
ACGGCTCTGTGGGGCGTCGCTCTTGGGAAGAGGATGGAGCTGCCCGACGG
CGTGAGGGTGAGGGGCGAGAAAGAAAGGGGCGGGGGCTGAGGTGCCGTCT
CTAATGCAGAGAGAGGGGAGGTGGGAGAGGGAACAAGGACAAGCTTAACG
ATAAACGGCTTTGGCCTCGTATTGTGCACGCCAAGCTGTTGGTGTAGCTT
CCGTGGGCGCCTGGCCCGCGCTAGCTCTTTGTGGGCCGGCCGTGTGCCAT
CTAGTCGGCGACCCGCACACTCTTCGTCGAAGGGCACACCACGTAGGCAG
GCAAAGCTAGCAAGCAAAGTGTTTGATTTTTGATTGTTTGGCGCCCCCCT
AATGCGTATAGGTTGGGTTGGCGTCGATTAGCAACGACACTTTGAAACTT
CCCGCCCACTCGTACGTGAGCTGGACAACCAGGGCGCCATTTTTTTCGTT
TGTTGTTTTTGGCGGTCGGTCAATGCTGGCGATTGAGTTGCAGTAGTTGG
TTTTTTGTGCGGGGTGGAGAATCCGCTCAGGGGGGATGATCGTGCCACGT
AGTGTGTGTATGGTAAGGCACCCACGCGGCAGTCACATAGTACCCCCATT
GCTGTATCTGGAAGTGGCCACGCCGGAAAGTGAATCAACTGATTCACGCT
GTCATCCATGTGCTAGTCCGTCTCAAGCGATTCTCAGTAGGATGCAGCTC
CATGCAACTCGCCAAAGATCTCACGGCGCTTTTGGTGCAAGCAATGCCTG
CCTGGTCTGTGAAAACCCGACGTGCTCCGTTTCGGCATCGTAGGGGTGCG
AGGGTCTATGGTCACACGACCACGGCCATGCATGATATCGAGTACCCCCC
CCCCCCCCAGCATTGTAGGGATGCGACGGTCTATGGGCATATGACTGAGG
CCATGCATGACATGAGAACACCCGCCCCCCCCCTCCCTCGCGCACGCTCG
CTCGTTCGCTCGCTGGATGTATAAAACCTCGCCGCTTCTTGCAGGTTAAG
TGGGCGGATGTCCTCCTCTCGATGCGCTACCAACAGAACCTCCTAAAGGC
GTACCGAAGTCGGGGTCTCCTCGACGAAGATGCCGCCGCTGCTTCTGCCG
CCTCTTTCACCCATTCCACCGCCGCCGTCAACGATTCAGGTGCGGTGGCG
GCGGCGGTGGCGGTGACCTCCGCACCGGTCCCTCCCGATGGCTTTTCTTC
TGAGAAAAACGCGGACCGACCTTCCCGTCCGCCGCTCGTGATGCCCCTCG
ACCACTTTCACGGGCCCAGTTTTCACGCCCTACTGAACGATTACCGAGCC
GACAACGCCAGGCCCGAGATGGCGGGCGACGGCGAACTAGAGGAAGATGG
CGCGGAGGCCGAGGTGGAAGGGGGGGCGGGGTCGGGGGTGGGGGTGGGGG
CTGCGAACGATGTCGCCGACGGTAGCGGGGGGCGGGGGGGCGGTGCTCGG
AGTCCGCCGTTGACCTTGCCGATCGACGCTCACCGAGAGAAGATCCTCAA
GCACGTCAGAAATAATCGTGTGACGGTCATACACGGGGAGACTGGGAGTG
GGAAAAGCTCGCGGCTGCCGGTCATGCTCATCGAGGACGCCATGGAGCGT
GGCGGGCGTCGCGCGAAGATGTTCGTCTCCCAGCCACGGCGCGCGGCGAC
CCGCGCGCTCGCGCAGCGGGTGCGGGAGGAGGCGAAGGAGTCCGGGGGCA
AGTGGAACGTGGCCATGCGGCTAGGGCACGGCGTGAGGGAGGGGCCCAGG
GGGGCGGAGGTGACGTTCGCCACGACGGGGTACATCGTCAGACTGATCGC
GAACAGCCCGGGGCTGTTGGATTCTCACACGCATCTCATCATCGACGAGG
TGGGTGGGTGGTGGGCGGGAGTGCGGGCTCTTGCGGAGTCTGCCGCAGTG
GCAGCGGTGGTTGCAGTGGCAGCGACTTGGGGTAGGACCACGTAAAATCA
GGCGTGCGTGTGTTCGTTGGGCGTTGTGTTCGTTGGTTTGTTGGTTGGTT
CGATCATTTGTTTTTGCACGCGCGGGCCCTTGTTTTGTTAGCTCCTGTAC
GTTTCTCGCGTGTGCGCGTTTCTTGTCTCTGTCTGTCTGTCTGTCTGTCT
GTCTGTCTGCATGACTGTGAAACTGACTTGTGTATCTTCCTGCCTGCCCG
TCTGCATAACATGACATGACCCCACGCAGGTGCACGAGCGTTCCGTTGAC
ACGGACCTTCTGTGTTTCTTCGCCAAGAGACTCATGGACTCCCACCCCGA
CTTGCGCGTGATCGTCATGAGCGCAACGCTCTCCGCGAGGCTAGTGAGCA
ACTACTACGGCCTAAGCACGCTCCCTCTCTTCGTCGGCTCGAAGCGTTTT
CCAGTCAGGCAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig12306:239..6700-

>mRNA_M-pyrifera_M_contig12306.4740.1 ID=mRNA_M-pyrifera_M_contig12306.4740.1|Name=mRNA_M-pyrifera_M_contig12306.4740.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5598bp|location=Sequence derived from alignment at M-pyrifera_M_contig12306:239..6700- (Macrocystis pyrifera P11B4 male)
CAGGGCGATACGCTAGCAATCGATGGGTCGGGGTGGGTGTTCCAACTCTT
GGAAGGCCAACGCGTCGACCATGGCGGGGACTACGACCTTCTCCATGAAG
CGGTCGTGCGCGAGGTCTCACGACTCCGCGACCAGGGCGATACGCTAGCA
ATCGATGGGTCGGGGTGGGTGTTCCAACTCTTGGAAGGCCAACGCGTCGA
CCATGGCGGGGACTACGACCTTCTCCATGAAGCGGTCGTGCGCGAGGTCT
CACGACTCCGCGACGCGGGGCTTTTGCTCTTGGTATTCAAGGACGGCCGC
AGCCGCAAGATGAAGGCCGTGACGAGAGAGCTTCGGAGGGAGAACGTTGC
CGAGAGTTTCGCTCGGCTGTACGGGTACACTCTGGATGGCGGGGGCGCGT
TCGTGGGCGCGGGGGTGGGCCCCGACCGCAGCGTTAACTCTTTCCCGGTC
CCCAAGATGGCGGACGCGCAGTTCTACGCGTCGCTGCGCTCCTTGGGGGT
GAAGGTGGTCGAGCGGGGCTTTTGCTCTTGGTATTCAAGGACGGCCGCAG
CCGCAAGATGAAGGCCGTGACGAGAGAGCTTCGGAGGGAGAACGTTGCCG
AGAGTTTCGCTCGGCTGTACGGGTACACTCTGGATGGCGGGGGCGCGTTC
GTGGGCGCGGGGGTGGGCCCCGACCGCAGCGTTAACTCTTTCCCGGTCCC
CAAGATGGCGGACGCGCAGTTCTACGCGTCGCTGCGCTCCTTGGGGGTGA
AGGTGGTCGAGTGCACCGGCGAGGCGGACCAGGAGATTGCCAAAGCTAGC
GCGGCAGACCCGACGGGGAGAACTTTCGCCTTGGGGGGCGACAGCGACTA
CTTTATCTTCGAGCGCTGCCGTTACATCCACTTCCGCGGCCTGAAGGTAA
AACCAAAAATTCGCGGAGTGCACCGGCGAGGCGGACCAGGAGATTGCCAA
AGCTAGCGCGGCAGACCCGACGGGGAGAACTTTCGCCTTGGGGGGCGACA
GCGACTACTTTATCTTCGAGCGCTGCCGTTACATCCACTTCCGCGGCCTG
AAGGTAAAACCAAAAATTCGCGGAGTGATGGAAGAAGGAGCCGGATTAGA
GGCGCGCGTCTGGACTCGCCCGCGGCTGGCAGAACTCTGCGGCATAGATG
AGGACCAGGTGGTGGAGTGGGCCATACTCATGGGGAACGATTACACGGGC
CACTTGTCGTTTGGGCACCTGGGTGTGGGCGGGCGCAACAAGGGAAGACC
TGAGAGGGTGATGGAAGAAGGAGCCGGATTAGAGGCGCGCGTCTGGACTC
GCCCGCGGCTGGCAGAACTCTGCGGCATAGATGAGGACCAGGTGGTGGAG
TGGGCCATACTCATGGGGAACGATTACACGGGCCACTTGTCGTTTGGGCA
CCTGGGTGTGGGCGGGCGCAACAAGGGAAGACCTGAGAGGACGCTCGAGT
GGATCCAGGCCCGGGGGCCCGGCTTCAGGGTTGATGCCAGGCCTCCCCCG
CGGCCTGCTCCGTTCCATAAGGAAAGCGGCGGCAGCATCGCTGGCGGCGG
TGGCGGCGACGACCAAAGAGAAGAAGCAGAAGCAGGCGTAGGAGCGGAAG
AGTACCCGCAAGAAGAGAATGGCAAGGAAGATTCTTTGCCGGAACGATAT
TCGAAGTTTTTTTCAAATAGAGGGCTCACGCTGCCGATGGGCGAGGGGGT
GGACACGCCGGGACGGGAAAATGGCGCAGGAGTGACTGCAGCCGGGAGTG
CAGAGGCGGGGGTGGAGACGGCGGGGGCAGTGGTGGGGGTGGGGGAGGGA
GAGGGGGCAGCAGCAACAGCGGCAGCAGTGCCAGCAGGAGCAGCAGCAGC
GACGGAGGAGGCGTCGTTCTCGGCGACGCTCGAGTGGATCCAGGCCCGGG
GGCCCGGCTTCAGGGTTGATGCCAGGCCTCCCCCGCGGCCTGCTCCGTTC
CATAAGGAAAGCGGCGGCAGCATCGCTGGCGGCGGTGGCGGCGACGACCA
AAGAGAAGAAGCAGAAGCAGGCGTAGGAGCGGAAGAGTACCCGCAAGAAG
AGAATGGCAAGGAAGATTCTTTGCCGGAACGATATTCGAAGTTTTTTTCA
AATAGAGGGCTCACGCTGCCGATGGGCGAGGGGGTGGACACGCCGGGACG
GGAAAATGGCGCAGGAGTGACTGCAGCCGGGAGTGCAGAGGCGGGGGTGG
AGACGGCGGGGGCAGTGGTGGGGGTGGGGGAGGGAGAGGGGGCAGCAGCA
ACAGCGGCAGCAGTGCCAGCAGGAGCAGCAGCAGCGACGGAGGAGGCGTC
GTTCTCGGCGGAGCTGGAGGCGGCCCAGCGCGCGGTAAGCTTCTCCCGGG
CGCTGTACGCGCTCGAGCCTCTCGACGGGTTCCCGGACGACTCGCCCGAG
GAGGAGGAGGACGAGGCCGTCGCCGCGGAAGCTGGGGGAGGGCTCCCGGG
GCTTCGGAGCCGGGGCGCGGAGGGCGCCAGCGGAGGAGTAGGGGGAGGAG
GATACGCTGGCGGTAACCGGCACACGAGGCGCTTGAGGAAGAAGCGCGGC
GCCCGCAAAGGCCTCGCCGGCGGGGGTGGGTTCGGCGGTGACCACGGGAG
AGGGGCCCGGCGGGGGCAGCAGGCGAGGGCGGCGGCGCCGCCACCCACGA
GGTTGGACTTGGTAGAGGCGGAGCTCCAGTCGGAGTTGCTGTCGAAGCCG
TTCGGGGAAGCCGTGCTGGAGGCGCTGCAGCGGACGGTGGACCAAGAGGA
GGCCGTCCCGGGGGGGGGAGGGGGGCGGGTTTGGAGTCGGAGCGGCGCGT
GGAGGGCGGGGGAGGAGGACGGCCGGGAGGGCGAGCGCGTCGAGGCCGGC
GCGCGACGGACGGCTCTGTGGGGCGTCGCTCTTGGGAAGAGGATGGAGCT
GCCCGACGGCGTGAGGGAGCTGGAGGCGGCCCAGCGCGCGGTAAGCTTCT
CCCGGGCGCTGTACGCGCTCGAGCCTCTCGACGGGTTCCCGGACGACTCG
CCCGAGGAGGAGGAGGACGAGGCCGTCGCCGCGGAAGCTGGGGGAGGGCT
CCCGGGGCTTCGGAGCCGGGGCGCGGAGGGCGCCAGCGGAGGAGTAGGGG
GAGGAGGATACGCTGGCGGTAACCGGCACACGAGGCGCTTGAGGAAGAAG
CGCGGCGCCCGCAAAGGCCTCGCCGGCGGGGGTGGGTTCGGCGGTGACCA
CGGGAGAGGGGCCCGGCGGGGGCAGCAGGCGAGGGCGGCGGCGCCGCCAC
CCACGAGGTTGGACTTGGTAGAGGCGGAGCTCCAGTCGGAGTTGCTGTCG
AAGCCGTTCGGGGAAGCCGTGCTGGAGGCGCTGCAGCGGACGGTGGACCA
AGAGGAGGCCGTCCCGGGGGGGGGAGGGGGGCGGGTTTGGAGTCGGAGCG
GCGCGTGGAGGGCGGGGGAGGAGGACGGCCGGGAGGGCGAGCGCGTCGAG
GCCGGCGCGCGACGGACGGCTCTGTGGGGCGTCGCTCTTGGGAAGAGGAT
GGAGCTGCCCGACGGCGTGAGGGTTAAGTGGGCGGATGTCCTCCTCTCGA
TGCGCTACCAACAGAACCTCCTAAAGGCGTACCGAAGTCGGGGTCTCCTC
GACGAAGATGCCGCCGCTGCTTCTGCCGCCTCTTTCACCCATTCCACCGC
CGCCGTCAACGATTCAGGTGCGGTGGCGGCGGCGGTGGCGGTGACCTCCG
CACCGGTCCCTCCCGATGGCTTTTCTTCTGAGAAAAACGCGGACCGACCT
TCCCGTCCGCCGCTCGTGATGCCCCTCGACCACTTTCACGGGCCCAGTTT
TCACGCCCTACTGAACGATTACCGAGCCGACAACGCCAGGCCCGAGATGG
CGGGCGACGGCGAACTAGAGGAAGATGGCGCGGAGGCCGAGGTGGAAGGG
GGGGCGGGGTCGGGGGTGGGGGTGGGGGCTGCGAACGATGTCGCCGACGG
TAGCGGGGGGCGGGGGGGCGGTGCTCGGAGTCCGCCGTTGACCTTGCCGA
TCGACGCTCACCGAGAGAAGATCCTCAAGCACGTCAGAAATAATCGTGTG
ACGGTCATACACGGGGAGACTGGGAGTGGGAAAAGCTCGCGGCTGCCGGT
CATGCTCATCGAGGACGCCATGGAGCGTGGCGGGCGTCGCGCGAAGATGT
TCGTCTCCCAGCCACGGCGCGCGGCGACCCGCGCGCTCGCGCAGCGGGTG
CGGGAGGAGGCGAAGGAGTCCGGGGGCAAGTGGAACGTGGCCATGCGGCT
AGGGCACGGCGTGAGGGAGGGGCCCAGGGGGGCGGAGGTGACGTTCGCCA
CGACGGGGTACATCGTCAGACTGATCGCGAACAGCCCGGGGCTGTTGGAT
TCTCACACGCATCTCATCATCGACGAGGTTAAGTGGGCGGATGTCCTCCT
CTCGATGCGCTACCAACAGAACCTCCTAAAGGCGTACCGAAGTCGGGGTC
TCCTCGACGAAGATGCCGCCGCTGCTTCTGCCGCCTCTTTCACCCATTCC
ACCGCCGCCGTCAACGATTCAGGTGCGGTGGCGGCGGCGGTGGCGGTGAC
CTCCGCACCGGTCCCTCCCGATGGCTTTTCTTCTGAGAAAAACGCGGACC
GACCTTCCCGTCCGCCGCTCGTGATGCCCCTCGACCACTTTCACGGGCCC
AGTTTTCACGCCCTACTGAACGATTACCGAGCCGACAACGCCAGGCCCGA
GATGGCGGGCGACGGCGAACTAGAGGAAGATGGCGCGGAGGCCGAGGTGG
AAGGGGGGGCGGGGTCGGGGGTGGGGGTGGGGGCTGCGAACGATGTCGCC
GACGGTAGCGGGGGGCGGGGGGGCGGTGCTCGGAGTCCGCCGTTGACCTT
GCCGATCGACGCTCACCGAGAGAAGATCCTCAAGCACGTCAGAAATAATC
GTGTGACGGTCATACACGGGGAGACTGGGAGTGGGAAAAGCTCGCGGCTG
CCGGTCATGCTCATCGAGGACGCCATGGAGCGTGGCGGGCGTCGCGCGAA
GATGTTCGTCTCCCAGCCACGGCGCGCGGCGACCCGCGCGCTCGCGCAGC
GGGTGCGGGAGGAGGCGAAGGAGTCCGGGGGCAAGTGGAACGTGGCCATG
CGGCTAGGGCACGGCGTGAGGGAGGGGCCCAGGGGGGCGGAGGTGACGTT
CGCCACGACGGGGTACATCGTCAGACTGATCGCGAACAGCCCGGGGCTGT
TGGATTCTCACACGCATCTCATCATCGACGAGGTGCACGAGCGTTCCGTT
GACACGGACCTTCTGTGTTTCTTCGCCAAGAGACTCATGGACTCCCACCC
CGACTTGCGCGTGATCGTCATGAGCGCAACGCTCTCCGCGAGGCTAGTGA
GCAACTACTACGGCCTAAGCACGCTCCCTCTCTTCGTCGGCTCGAAGCGT
TTTCCAGTCAGGCAAGTGCACGAGCGTTCCGTTGACACGGACCTTCTGTG
TTTCTTCGCCAAGAGACTCATGGACTCCCACCCCGACTTGCGCGTGATCG
TCATGAGCGCAACGCTCTCCGCGAGGCTAGTGAGCAACTACTACGGCCTA
AGCACGCTCCCTCTCTTCGTCGGCTCGAAGCGTTTTCCAGTCAGGCAA
back to top