mRNA_M-pyrifera_M_contig123039.4735.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A517VW82_9PLAN (Transposase IS116/IS110/IS902 family protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VW82_9PLAN) HSP 1 Score: 146 bits (368), Expect = 2.740e-42 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 1
Query: 1 LIRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSGG 246
LIRDELITRLNHFTEQINAI+QQLEELRE F QV+AL DIHGIGLY+ALVIVAELGEIERFRSAKQVGA+AGLTSKVNQSGG
Sbjct: 33 LIRDELITRLNHFTEQINAIDQQLEELRESFPQVEALLDIHGIGLYSALVIVAELGEIERFRSAKQVGAYAGLTSKVNQSGG 114
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A517Q0G9_9PLAN (Transposase IS116/IS110/IS902 family protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q0G9_9PLAN) HSP 1 Score: 147 bits (371), Expect = 1.740e-41 Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 1
Query: 1 LIRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSGGTVI 255
LIRDELITRLNHFTEQINAI+QQLEELRE F QV+AL DIHGIGLY+ALVIVAELGEIERFRSAKQVGA+AGLTSKVNQSGG ++
Sbjct: 176 LIRDELITRLNHFTEQINAIDQQLEELRESFPQVEALLDIHGIGLYSALVIVAELGEIERFRSAKQVGAYAGLTSKVNQSGGALL 260
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A517VL05_9PLAN (Transposase IS116/IS110/IS902 family protein n=2 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VL05_9PLAN) HSP 1 Score: 137 bits (346), Expect = 2.160e-37 Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = 1
Query: 1 LIRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSGG 246
LIRDELITRL+HFTEQIN I+QQLEEL+ F QV+AL +IHGIGLYTALVIVAELGE+ERFRSAKQVGA+AGLTSKVNQSGG
Sbjct: 176 LIRDELITRLDHFTEQINVIDQQLEELQVSFPQVEALLNIHGIGLYTALVIVAELGEVERFRSAKQVGAYAGLTSKVNQSGG 257
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A517VET3_9PLAN (Transposase IS116/IS110/IS902 family protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517VET3_9PLAN) HSP 1 Score: 130 bits (327), Expect = 4.440e-36 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 1
Query: 1 LIRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSGG 246
LIRDELITRL+HFTEQI I+QQLEELR F QV+AL +IHGIGLYT LVIVAE GE+ERFRSAKQVGA+AGLTSKVN SGG
Sbjct: 33 LIRDELITRLDHFTEQITVIDQQLEELRVSFPQVEALLNIHGIGLYTTLVIVAEQGEVERFRSAKQVGAYAGLTSKVNLSGG 114
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A1G2ZBY0_9BACT (DEDD_Tnp_IS110 domain-containing protein n=1 Tax=Planctomycetes bacterium RBG_13_63_9 TaxID=1801965 RepID=A0A1G2ZBY0_9BACT) HSP 1 Score: 103 bits (256), Expect = 3.930e-24 Identity = 45/82 (54.88%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 1 LIRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSGG 246
L+RD+L+ +L H+ + +++Q+ ++ + FLQV+AL DI+G+G+++ALVI+AELGE+ERFR+AKQVGA+AGLT +V+QSGG
Sbjct: 176 LVRDQLLAQLEHYAHHVAVLDRQIGQVGKDFLQVEALLDIYGMGVFSALVIIAELGEVERFRTAKQVGAYAGLTCRVHQSGG 257
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: X0W6L1_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0W6L1_9ZZZZ) HSP 1 Score: 94.0 bits (232), Expect = 7.740e-22 Identity = 40/81 (49.38%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 1 LIRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSG 243
L+RD+LI +L H+ + +++Q+E++ + F Q +AL DI+G+G+++ALV++ ELGE+ERFR+ KQVG++AGLT +V+QSG
Sbjct: 26 LVRDQLIEQLEHYAKHAAVLDRQIEQVGKDFPQFEALLDIYGMGIFSALVVIGELGEVERFRTVKQVGSYAGLTCRVHQSG 106
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A846P6K1_9BACT (IS110 family transposase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A846P6K1_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 9.520e-22 Identity = 47/79 (59.49%), Postives = 64/79 (81.01%), Query Frame = 1
Query: 4 IRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQS 240
+RDEL+ R+ H+ Q+ +I+++ EL+E + QV+AL DI GIGLY AL+IVAE G+ ERFR AKQVGA++GLT+KVNQS
Sbjct: 177 VRDELLDRITHYKLQMASIDEKRGELKESYPQVEALLDIRGIGLYLALLIVAETGDPERFRCAKQVGAYSGLTAKVNQS 255
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A517YAH7_9BACT (Transposase IS116/IS110/IS902 family protein n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YAH7_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 1.300e-18 Identity = 39/80 (48.75%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 4 IRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSG 243
+RDEL+ R H+ Q+ I+ +LE +R+ F + +AL ++HGIG +TALV++AE G++ RFR+AKQ A+ GLT++V QSG
Sbjct: 177 VRDELLERHAHYERQLKLIDARLETMRDEFPECQALLELHGIGTFTALVLIAEWGDVTRFRTAKQAAAYTGLTARVEQSG 256
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A1G3AA54_9BACT (DEDD_Tnp_IS110 domain-containing protein n=1 Tax=Planctomycetes bacterium RBG_16_64_12 TaxID=1801971 RepID=A0A1G3AA54_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 1.390e-15 Identity = 37/49 (75.51%), Postives = 45/49 (91.84%), Query Frame = 1
Query: 97 QVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSG 243
Q L++IHGIGLY+AL+IVAELGE+ERFR AKQVGA+AGLTS+V+QSG
Sbjct: 133 QADVLQEIHGIGLYSALLIVAELGEVERFRRAKQVGAYAGLTSRVHQSG 181
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Match: A0A523VDQ4_9CHLR (IS110 family transposase (Fragment) n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A523VDQ4_9CHLR) HSP 1 Score: 79.7 bits (195), Expect = 2.220e-15 Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 4 IRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVIVAELGEIERFRSAKQVGAFAGLTSKVNQSG 243
IRDEL+ RL HF I ++ L E+ + +V+AL D+ GIGLY+AL+IVAE+GE +RF + QV A GLT +V QSG
Sbjct: 172 IRDELVERLAHFNAAIKRTDKLLGEIAADYPEVEALLDMRGIGLYSALLIVAEIGEPDRFTNPGQVSASTGLTPRVRQSG 251 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123039.4735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123039.4735.1 >prot_M-pyrifera_M_contig123039.4735.1 ID=prot_M-pyrifera_M_contig123039.4735.1|Name=mRNA_M-pyrifera_M_contig123039.4735.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp LIRDELITRLNHFTEQINAINQQLEELREFFLQVKALRDIHGIGLYTALVback to top mRNA from alignment at M-pyrifera_M_contig123039:2..339+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123039.4735.1 ID=mRNA_M-pyrifera_M_contig123039.4735.1|Name=mRNA_M-pyrifera_M_contig123039.4735.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=338bp|location=Sequence derived from alignment at M-pyrifera_M_contig123039:2..339+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123039:2..339+ >mRNA_M-pyrifera_M_contig123039.4735.1 ID=mRNA_M-pyrifera_M_contig123039.4735.1|Name=mRNA_M-pyrifera_M_contig123039.4735.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig123039:2..339+ (Macrocystis pyrifera P11B4 male)back to top |