mRNA_M-pyrifera_M_contig122930.4709.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A7V9PGH3_9ACTN (AMP-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9PGH3_9ACTN) HSP 1 Score: 238 bits (607), Expect = 1.730e-76 Identity = 115/175 (65.71%), Postives = 142/175 (81.14%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFA+P++ +L+A P+RWDLS + + SSGVMWS+P+KE LL H P ML+VDSLGSSEA+GMG S + TA F +GE+ VV+ DDG V+PGSGDIGR+G+KG +PVGYYKD K+ TFP I+GVRYS+PGD+AT+EADGT+TLLGRGSV INTGGEKVFPEEVEEA+
Sbjct: 3 GDAFAKPMLRALDAAPERWDLSRLFIIYSSGVMWSEPVKEGLLKHNPAMLLVDSLGSSEAIGMGTSLAGGGGSARTATFRIGESAVVLTDDGRQVEPGSGDIGRIGIKGRVPVGYYKDPEKSAQTFPVIDGVRYSMPGDYATVEADGTITLLGRGSVVINTGGEKVFPEEVEEAV 177
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A7Y2DQI6_9ACTN (AMP-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DQI6_9ACTN) HSP 1 Score: 239 bits (611), Expect = 9.780e-74 Identity = 117/175 (66.86%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFARP++ +L+AEP RWD+SS+ ++SSGVMWS K L+ H P ML VD+ GSSEA+G+G+S SSKD TA F L VVI DDG LV+PGSGDIGR+GV G +PVGYYKD KT +TFPTI+G RYS+PGD+AT+E DGT+ LLGRGSVCINTGGEKVFPEEVEEAL
Sbjct: 284 GDAFARPMLAALDAEPGRWDISSLRVLISSGVMWSAETKAGLMAHNPKMLCVDTYGSSEAIGIGSSVSSKDDAAKTASFSLSSRSVVISDDGRLVEPGSGDIGRVGVAGRVPVGYYKDPDKTASTFPTIDGTRYSVPGDYATVEPDGTIVLLGRGSVCINTGGEKVFPEEVEEAL 458
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A7W0LRC7_9ACTN (AMP-binding protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LRC7_9ACTN) HSP 1 Score: 235 bits (600), Expect = 1.090e-72 Identity = 114/175 (65.14%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G FA+P+V +LEA RWDLSS+ + SSGVMWS+P+KE LL H P M++VD+LGSSEA+GMG S S+ D TA F LG N VVI D LV+PGSG+IGR+G+KG +PVGYYKD KT ATFP ++GVRYS+PGD AT++A+GT+ LLGRGSV INTGGEKVFPEEVEE L
Sbjct: 290 GDVFAKPMVRALEANEGRWDLSSIVFIYSSGVMWSEPVKEALLRHNPKMMLVDALGSSEAIGMGTSVSAGDDAAGTASFSLGPNAVVIGDGNRLVEPGSGEIGRVGIKGRVPVGYYKDPEKTAATFPVVDGVRYSIPGDHATVDANGTIQLLGRGSVVINTGGEKVFPEEVEEVL 464
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A7Y2IKH5_9ACTN (AMP-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IKH5_9ACTN) HSP 1 Score: 236 bits (601), Expect = 3.230e-72 Identity = 112/175 (64.00%), Postives = 142/175 (81.14%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFA+P++++L+++PDRWD+SS+ ++SSGVMWS K L+ H P +L VD+ GSSEA+G+G+S SSKD TA F L + VI +DG +VQPGS +IGR+GV G +P+GY+KD KT TFPTI+GVRYS+PGDFAT+EADGT+TLLGRGSVCINTGGEKVFPEEVEEAL
Sbjct: 283 GDAFAKPMLEALDSQPDRWDISSLRVLISSGVMWSSSSKSGLMAHNPKLLCVDTYGSSEAIGIGSSVSSKDGSAKTASFSLSKKSAVITEDGRIVQPGSTEIGRVGVAGRVPLGYFKDPEKTAVTFPTIDGVRYSVPGDFATVEADGTITLLGRGSVCINTGGEKVFPEEVEEAL 457
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A5Q2RL53_9ACTN (AMP-binding protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RL53_9ACTN) HSP 1 Score: 231 bits (590), Expect = 1.190e-70 Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFA+P++ +L+A+PDRWD+SS+ M SSGVMWS+ KE LL H ML+VD+ SSEALGMG S S+ + TAKF LG+N VI DDG V+PGSG IGR+ V G +PVGYYKD KT ATF TI+G RYS+PGD+AT+EADG++TLLGRGSVCINTGGEKVFPEEVEEAL
Sbjct: 278 GDAFAKPMLAALDAQPDRWDISSLKMMSSSGVMWSEATKEGLLRHHAGMLLVDAFSSSEALGMGQSVSAAGAAAKTAKFSLGQNARVIDDDGHDVEPGSGTIGRVAVAGRVPVGYYKDPEKTAATFITIDGQRYSMPGDYATVEADGSLTLLGRGSVCINTGGEKVFPEEVEEAL 452
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A538BCH3_9ACTN (Acyl-CoA synthetase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538BCH3_9ACTN) HSP 1 Score: 226 bits (576), Expect = 1.470e-70 Identity = 112/175 (64.00%), Postives = 135/175 (77.14%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFARP++ L+A P+ WD+SS+ +VSSGVM S+P+K+ LL H P ML+VD+ SSEALGMG S SS TAKF LGEN V DDG VQPGSG++GR+ V+G PVGYYKD K+ TFP I+G RYS+PGD+AT+E DGT+ LLGRGSVCINTGGEKV+PEEVEEAL
Sbjct: 98 GDAFARPMLAELDANPEHWDISSLLMIVSSGVMLSEPVKQGLLRHHPGMLLVDAFSSSEALGMGQSISSAGGAAKTAKFVLGENARVFTDDGRDVQPGSGEMGRVAVRGRAPVGYYKDPEKSARTFPVIDGERYSMPGDYATVEPDGTLKLLGRGSVCINTGGEKVYPEEVEEAL 272
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A7V9JYQ5_9ACTN (Acyl-CoA synthetase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9JYQ5_9ACTN) HSP 1 Score: 231 bits (588), Expect = 2.710e-70 Identity = 114/175 (65.14%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFARP++ +L+AEPDRWDLSS+ + SSGVM+S+ K RLL H+P LIVD SSEALGMG S SS +TTA F GE+ +V+ DDG VQPGSG IGR+ V G+ P+GYYKDE KT +TF T++G RYS+PGD+AT+E DG++TLLGRGSVCINTGGEKVFPEEVEEA+
Sbjct: 282 GDAFARPVLRALDAEPDRWDLSSLFIIASSGVMFSEESKARLLRHLPGALIVDVFSSSEALGMGRSVSSAGGTETTAHFTTGEDTIVVGDDGTRVQPGSGVIGRVAVGGFQPLGYYKDEAKTASTFLTVDGRRYSVPGDYATVEGDGSLTLLGRGSVCINTGGEKVFPEEVEEAM 456
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: UPI000344C7AA (acyl-CoA synthetase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000344C7AA) HSP 1 Score: 230 bits (586), Expect = 4.390e-70 Identity = 113/175 (64.57%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFA+PI+ +L+AEPDRWDLSS+ ++VSSGVMWS+ K LL+H PNM+++D+ SSEALGMGAS S TA+F+L + +VI D V+PGSG+IGRL V G P+GY+KD KT+ATF I+G RYS PGDFAT+EADGT+TLLGRGSVCINTGGEKVFPEEVEEA+
Sbjct: 274 GDAFAKPILRALDAEPDRWDLSSLVAIVSSGVMWSKETKRGLLDHHPNMMLMDAFSSSEALGMGASVSGGGQTAETARFELNPDTIVIDDQNRRVEPGSGEIGRLAVGGRQPLGYFKDPDKTKATFLEIDGARYSCPGDFATVEADGTITLLGRGSVCINTGGEKVFPEEVEEAI 448
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: UPI001AA0156D (acyl-CoA synthetase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA0156D) HSP 1 Score: 228 bits (582), Expect = 1.930e-69 Identity = 110/175 (62.86%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFA+PI+ L+A P RWDLSS+ + SSGVMWS+P+K+ LL H P M+++D+ SSEA+G+G S S+ + TAKF LGEN VI DDG V+PGSG+IGR+ V+G+ P+GYYKD K+ ATF TI+G YS+PGD+A +EADGT+TLLGRGSVCINTGGEKVFPEEVEE L
Sbjct: 277 GDAFAKPILAELDANPGRWDLSSLFLITSSGVMWSEPVKQGLLKHNPTMMLIDAFSSSEAIGLGQSVSTAGNESKTAKFVLGENARVITDDGRDVEPGSGEIGRVAVRGYTPIGYYKDPEKSAATFVTIDGETYSMPGDYAQVEADGTLTLLGRGSVCINTGGEKVFPEEVEEIL 451
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Match: A0A4U3CEK6_9ACTN (Acyl-CoA synthetase n=1 Tax=Blastococcus sp. CCUG 61487 TaxID=1840703 RepID=A0A4U3CEK6_9ACTN) HSP 1 Score: 228 bits (580), Expect = 3.130e-69 Identity = 113/175 (64.57%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLIVDSLGSSEALGMGASSSSKDSVKTTAKFDLGENGVVIRDDGELVQPGSGDIGRLGVKGWMPVGYYKDEVKTQATFPTINGVRYSLPGDFATIEADGTVTLLGRGSVCINTGGEKVFPEEVEEAL 525
G AFA P++ +L+AEPDRW+LSS+ M SSGVMWS+ K+ LL H P M ++D+ SSEALGMG S S D TA+F LGEN VI D G VQPGSG IG +GV G +P+GYYKDE K+ TF I+G RYS PGDFAT+EADG++TLLGRGSVCINTGGEKVFPEEVEE L
Sbjct: 268 GDAFANPMLRALDAEPDRWNLSSLGIMASSGVMWSEETKQGLLRHHPGMFLMDAFSSSEALGMGLSVSGGDQTVPTARFQLGENAAVIDDYGRFVQPGSGGIGMVGVGGRVPLGYYKDEEKSARTFRVIDGKRYSFPGDFATVEADGSITLLGRGSVCINTGGEKVFPEEVEEVL 442 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122930.4709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122930.4709.1 >prot_M-pyrifera_M_contig122930.4709.1 ID=prot_M-pyrifera_M_contig122930.4709.1|Name=mRNA_M-pyrifera_M_contig122930.4709.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp GGAFARPIVDSLEAEPDRWDLSSVASMVSSGVMWSQPIKERLLNHIPNMLback to top mRNA from alignment at M-pyrifera_M_contig122930:2..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122930.4709.1 ID=mRNA_M-pyrifera_M_contig122930.4709.1|Name=mRNA_M-pyrifera_M_contig122930.4709.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122930:2..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122930:2..526+ >mRNA_M-pyrifera_M_contig122930.4709.1 ID=mRNA_M-pyrifera_M_contig122930.4709.1|Name=mRNA_M-pyrifera_M_contig122930.4709.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig122930:2..526+ (Macrocystis pyrifera P11B4 male)back to top |