mRNA_M-pyrifera_M_contig12286.4699.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: A0A6H5K161_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K161_9PHAE) HSP 1 Score: 294 bits (753), Expect = 1.240e-89 Identity = 170/261 (65.13%), Postives = 186/261 (71.26%), Query Frame = 1
Query: 13 LLEAVHRVNVPRVAALLCRGADVNITDAQGVTPLIIACERG---------------------------ELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVDPTIEERATSQGDTALMVACLSAVETEASSETIAALLEPHSDKISSGGSTAXXXXXXXXXXXXXXXXSKLSRKFALGPDDPRLLSRNRHGHTALHCAAFAQSPTAVRLLLEAGADCTVGDKAGRTAVDVALNLEGKK-TALREGPRGG 711
LLEAVH+VNV R AALL RGADVN TDAQGVTPLIIACERG EL+M+DLLL+A+ASTKM TN+TQSSCLHIAAKNNA IV RLL VDPTIEE+ATSQGDTALMVACLSAVETEASS T+ ALL P + + A K + LGPDDPRL++RNRHGHTALHCAAF+QSPTAVRLLLEAGADCT+GDKAGRTAV+VALNL KK T LREG RGG
Sbjct: 4 LLEAVHQVNVQRAAALLARGADVNTTDAQGVTPLIIACERGALCLGTSSNHAVTVTAXXXXXXPAATGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAAEIVLRLLEVDPTIEEKATSQGDTALMVACLSAVETEASSATLNALLRPRPTSTTGPSNNATSAPPRKTGSYASAGDGK-APVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIGDKAGRTAVEVALNLNKKKATGLREGARGG 263
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: D8LLU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU4_ECTSI) HSP 1 Score: 290 bits (742), Expect = 2.110e-88 Identity = 161/225 (71.56%), Postives = 177/225 (78.67%), Query Frame = 1
Query: 13 LLEAVHRVNVPRVAALLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVDPTIEERATSQGDTALMVACLSAVETEASSETIAALLEPHSDKISSGGSTAXXXXXXXXXXXXXXXXSKLSRKFALGPDDPRLLSRNRHGHTALHCAAFAQSPTAVRLLLEAGADCTVGDKAGRTAVDVALNLEGKKTA 687
LLEAVHRVNV R A LL RGADVN TDAQGVTPLIIACERGEL+M+DLLL+A+ASTKM TN+TQSSCLHIAAKNNA IV RLL VDPTIEERATSQGDTALMVACLSAVETEASS T+ ALL+P + + A K + LGPDDPRL++RNRHGHTALHCAAF+QSPTAVRLLLEAGADCT+ D+AG TAV+VALNL K TA
Sbjct: 4 LLEAVHRVNVQRAATLLARGADVNTTDAQGVTPLIIACERGELKMLDLLLKARASTKMVTNDTQSSCLHIAAKNNAEDIVLRLLEVDPTIEERATSQGDTALMVACLSAVETEASSATLNALLQPRLATTTGPSNKASGPPPRKTGRYASAGDGK-APVAVLGPDDPRLVARNRHGHTALHCAAFSQSPTAVRLLLEAGADCTIRDEAGLTAVEVALNLIKKATA 227
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: UPI000B2F7876 (ankyrin repeat domain-containing protein n=1 Tax=Novosphingobium rosa TaxID=76978 RepID=UPI000B2F7876) HSP 1 Score: 60.1 bits (144), Expect = 6.860e-7 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 13 LLEAVHRVNVPRVAALLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVDPTIEERATSQGDTALMVACLS 336
L++AV R + P V LL GAD ++ D +G++PL +AC+ G ++D LL A A + LHI A+ +V RLL + S+G+T LM A S
Sbjct: 69 LMQAVDRQDAPLVGLLLAAGADADLADEEGLSPLTLACQLGSETVLDRLLSAPHINLRAALPDGAGALHICARYAPATVVARLLAAKLPADA-LDSRGETPLMWAAAS 175
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: A0A812TYL4_9DINO (Ankrd17 protein n=3 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812TYL4_9DINO) HSP 1 Score: 59.3 bits (142), Expect = 1.300e-6 Identity = 61/215 (28.37%), Postives = 86/215 (40.00%), Query Frame = 1
Query: 49 VAALLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVDPTIEERATSQGDTALMVACLSAVETEASSETIAALLEPHSDKISSGGSTAXXXXXXXXXXXXXXXXSKLSRKFALGPDDPRLLSRNRHGHT-------ALHCAAFAQSPTAVRLLLEAGADCTVGDKAGRTAVDVALNLE 672
V LL A VN D++ PL AC L +LL A A +M T AA + AV++ R LLR+DP + R G +S+E +A LLE +D LS + + P LL++ H H ++ C F S RLLL+AGAD + + G+TA D+A +E
Sbjct: 284 VKVLLAAKAKVNARDSRHSIPLHWACHSDNLEAARILLHAGADLRM-TQLLGFDAFACAAGSGAVKVTRELLRIDPEVSLRYRLHGALIFF---------SSSTEIVATLLEAKAD---------VDEQLQIANSIWRTMFMALSLRHRISPS---LLTKLAHHHQRATPLMLSILCGGFGAS----RLLLQAGADVNIRNSRGKTAADLAREVE 472
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: UPI00159CC0BF (CARD- and ANK-domain containing inflammasome adapter protein n=2 Tax=Hippoglossus TaxID=8266 RepID=UPI00159CC0BF) HSP 1 Score: 57.4 bits (137), Expect = 6.600e-6 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 1 MSLSLLEAVHRVNVPRVAALLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLR--VDPTI 282
+ L+L AV + V AL+ GADVN+ D QG TPL++A E G + +LL +A A + SS LH+A + +V IV+ LL +DP I
Sbjct: 404 LGLALFSAVRQNQHGTVTALIDSGADVNMCDTQGYTPLLLAAELGHPEVFRVLLAKQAKIDAALCDC-SSALHLAVHSGSVPIVQTLLEKGLDPNI 498
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: A0A2H9SJQ1_9GAMM (Uncharacterized protein n=1 Tax=Legionella sp. TaxID=459 RepID=A0A2H9SJQ1_9GAMM) HSP 1 Score: 57.0 bits (136), Expect = 8.480e-6 Identity = 32/93 (34.41%), Postives = 50/93 (53.76%), Query Frame = 1
Query: 4 SLSLLEAVHRVNVPRVAALLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVDPTI 282
S L+ A+ + V LL GA+ NI+++ GVTPL IA +G L +V+ L+EA A + ++ LH A N + +V RL++ I
Sbjct: 473 STPLMIAIQNDHADMVKLLLNMGANPNISNSFGVTPLAIAAHQGHLEIVNCLIEAHARLDQRKTDDGATALHFAVAGNHIAVVERLVQAGANI 565
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: A0A6L4YDN0_9RHOO (Ankyrin repeat-containing protein n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A6L4YDN0_9RHOO) HSP 1 Score: 55.8 bits (133), Expect = 8.840e-6 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 13 LLEAVHRVNVPRVAALLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVD 273
LL A+ R N+P V LL D++ITD QG++PL+ A +RGE +MV +L++ AS + ++S L A +NN + L +V+
Sbjct: 129 LLNAIQRSNLPYVKTLLTMDFDLDITDEQGMSPLMCAAQRGEFKMVQMLIKRGASPFLVGPSGKASDL--ALQNNFPAVNEFLKKVE 213
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: UPI002007F9E6 (uncharacterized protein n=1 Tax=Annulohypoxylon maeteangense TaxID=1927788 RepID=UPI002007F9E6) HSP 1 Score: 57.0 bits (136), Expect = 9.740e-6 Identity = 68/257 (26.46%), Postives = 102/257 (39.69%), Query Frame = 1
Query: 22 AVHRVNVPRVAA----LLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTK-MATNETQSSCLHIAAKNNAVRIVRRLLRVDPTIEERATS-QGDTALMVACLSAVETEASSETIAALLEPHSDKISSGGSTAXXXXXXXXXXXXXXXXSKLSRKFALGPD------------------------DPRLLSRNRHGHTALHCAAFAQSPTAVRLLLEAGADCTVGDKAGRTAVDVALNLEGKKTALREGP 702
A+H + +A LL GAD+ D Q TPL++AC ++R V +LL+ A+ +AT+ LHIAA+ +VR LL + R DT L +A + ++T+ LLE +D + G+ DPR + ++R G + L AA V+ LL+AG D T D GRTA DVA NL+ ++ + P
Sbjct: 989 ALHHATMENMAEAVEQLLDSGADIECQDGQDATPLLLACLGEQMRTVRVLLDRGANPDHIATDSANYRALHIAARQGNEPLVRVLLEAGSSENARLKKPMWDTPLHLAIYHSQNDTQYAQTVNTLLEFGADVDALNGNNMTPLHIVIKESKDENIAKSXXXXXXXXXXXXXXXXXXXXXXXXXNSPMASILWDPRGIMKDR-GVSVLFAAASQGKVLRVQQLLKAGYDKTEQDSWGRTAFDVASNLDVRELLAPDTP 1244
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: A0A7R8WMP3_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WMP3_9CRUS) HSP 1 Score: 55.5 bits (132), Expect = 2.810e-5 Identity = 59/211 (27.96%), Postives = 90/211 (42.65%), Query Frame = 1
Query: 67 RGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVDPTIEERATSQGDTALMVACLSAVETEASSETIAALLEPHSDKISSGGSTAXXXXXXXXXXXXXXXXSKLSRKFA-LGPDDPRLLS-RNRHGHTALHCAAFAQSPTAVRLLLEAGADCTVGDKAGRTAVDVALNLEGKKTALR 693
RG +N D G TPL A +G + V LLLEA A + NE + + +A + + + I E G T L +A ++ +++ LLE + L ++ L P+D +++ RN G+T L A Q VRLLL+AGAD T+ +KAG+T +D+A N + LR
Sbjct: 156 RGDMLNERDNDGDTPLSCAVRKGRVECVRLLLEAGADLTIG-NEEGKTPIDLAENGSEISLC--------LIREAKVKYGKTPLKLAAITR-----DIDSLKQLLEEDMTRFWKKTEDGQLPIHTAAQFGGRKVVGFLLCRYEKLHPEDGDMVNYRNGDGNTPLSLAVQKQDIETVRLLLQAGADVTIANKAGKTPIDLAENESEVLSELR 352
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Match: A0A7R9BDG4_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BDG4_9CRUS) HSP 1 Score: 55.1 bits (131), Expect = 3.230e-5 Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 49 VAALLCRGADVNITDAQGVTPLIIACERGELRMVDLLLEAKASTKMATNETQSSCLHIAAKNNAVRIVRRLLRVD 273
+ +LL GA N+ D +G +PL++A ER R+V LLL+ A+ + ATN + + LH+AA+ N V + LL+ D
Sbjct: 171 IESLLRVGAQPNVFDDEGASPLMLATERNCPRLVRLLLQNGANPE-ATNRYKETALHVAARRNLVTVAEELLKAD 244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12286.4699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12286.4699.1 >prot_M-pyrifera_M_contig12286.4699.1 ID=prot_M-pyrifera_M_contig12286.4699.1|Name=mRNA_M-pyrifera_M_contig12286.4699.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp MSLSLLEAVHRVNVPRVAALLCRGADVNITDAQGVTPLIIACERGELRMVback to top mRNA from alignment at M-pyrifera_M_contig12286:222..7521- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12286.4699.1 ID=mRNA_M-pyrifera_M_contig12286.4699.1|Name=mRNA_M-pyrifera_M_contig12286.4699.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7300bp|location=Sequence derived from alignment at M-pyrifera_M_contig12286:222..7521- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12286:222..7521- >mRNA_M-pyrifera_M_contig12286.4699.1 ID=mRNA_M-pyrifera_M_contig12286.4699.1|Name=mRNA_M-pyrifera_M_contig12286.4699.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1422bp|location=Sequence derived from alignment at M-pyrifera_M_contig12286:222..7521- (Macrocystis pyrifera P11B4 male)back to top |