mRNA_M-pyrifera_M_contig122833.4693.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: A0A5A8EKG6_CAFRO (AB hydrolase-1 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EKG6_CAFRO) HSP 1 Score: 60.5 bits (145), Expect = 9.470e-9 Identity = 28/78 (35.90%), Postives = 42/78 (53.85%), Query Frame = 1
Query: 49 LVVLHGHSGSSAHWECIADALV------------HEADLYLLDLPGWGRSPAPVELTSCRNPDRVVDLCLECLGGWMQ 246
+VV+HGHS SA ++C+ D ++ A ++LLD+PGWGRSPAP + R +V L GW++
Sbjct: 112 IVVVHGHSSGSALFQCVVDDVITGLGAPGVLHKGQRAVVHLLDMPGWGRSPAPPAFAALREQHAIVSASASMLRGWLR 189
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: A0A1H3Z628_9BURK (Pimeloyl-ACP methyl ester carboxylesterase n=2 Tax=Acidovorax TaxID=12916 RepID=A0A1H3Z628_9BURK) HSP 1 Score: 52.8 bits (125), Expect = 4.230e-6 Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 13 HIRGSKKTRSRPLVVLHGHSGSSAHWECIADALVHEA-DLYLLDLPGWGRSPAPV 174
H+ G + +RPLV+LHG SGS HW DALV L++ DLPG+G S AP+
Sbjct: 32 HVWGEARPNARPLVLLHGGSGSWTHWVRNIDALVAAGRQLWVPDLPGFGESAAPL 86
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: A0A495V4F0_9GAMM (Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax=Thiocapsa rosea TaxID=69360 RepID=A0A495V4F0_9GAMM) HSP 1 Score: 52.4 bits (124), Expect = 6.070e-6 Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 34 TRSRPLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVELTSCRNPDRVVDLCLE 225
T PL+++HG GSS HW+ A+ L DLY LDLPG G +PA T P+ + DL ++
Sbjct: 23 TGKPPLLLIHGWGGSSRHWQHTAEHLSDIRDLYALDLPGHGDTPARPGATG---PETLADLVID 83
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: UPI0019408AF3 (alpha/beta fold hydrolase n=1 Tax=Dactylosporangium siamense TaxID=685454 RepID=UPI0019408AF3) HSP 1 Score: 51.6 bits (122), Expect = 1.040e-5 Identity = 23/55 (41.82%), Postives = 31/55 (56.36%), Query Frame = 1
Query: 13 HIRGSKKTRSRPLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVE 177
H+ +K PLV++HG WE + D L D+ +DLPG+GRSPAP E
Sbjct: 11 HLHSVRKGSGAPLVLIHGIGHHWRAWEPVIDLLAEHHDVIAIDLPGFGRSPAPAE 65
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: A0A1H2UL45_THIRO (Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax=Thiocapsa roseopersicina TaxID=1058 RepID=A0A1H2UL45_THIRO) HSP 1 Score: 51.6 bits (122), Expect = 1.140e-5 Identity = 27/63 (42.86%), Postives = 34/63 (53.97%), Query Frame = 1
Query: 46 PLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVELTSCRNPDRVVDLCLECLG 234
PLV++HG GSS HW+ + L DLY LDLPG G +PA T R+V + LG
Sbjct: 27 PLVLIHGWGGSSGHWQHTPEHLSGVRDLYALDLPGHGETPARPGATGPETSARLVIAFADRLG 89
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: A0A3L6ZZ79_9HYPH (Alpha/beta fold hydrolase n=1 Tax=Xanthobacter tagetidis TaxID=60216 RepID=A0A3L6ZZ79_9HYPH) HSP 1 Score: 51.2 bits (121), Expect = 1.490e-5 Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 1
Query: 43 RPLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVELTSCRNPDRVVDLCLECLGGWM 243
RPLV+LHG SGS HW D L ++ LDLPG+G +P P R+P+ + E L M
Sbjct: 28 RPLVLLHGGSGSHTHWIANIDRLAQGFEVVALDLPGYGDAPRPAS----RDPETYIGSLAEDLAAAM 90
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: A7NIU9_ROSCS (Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) TaxID=383372 RepID=A7NIU9_ROSCS) HSP 1 Score: 50.8 bits (120), Expect = 1.990e-5 Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 1
Query: 37 RSRPLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVELTSCRNPDRVVDL 216
R PLV+LHG +GSSA W+ + + + +DLPG GR+PAPV T P D+
Sbjct: 18 RGDPLVLLHGFTGSSATWDEVVPHFMQRFRVIRIDLPGHGRTPAPVGPTRGALPSVAADI 77
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: A0A3S5JUG0_9GAMM (Malonyl-[acyl-carrier protein] O-methyltransferase n=2 Tax=Cellvibrionales TaxID=1706369 RepID=A0A3S5JUG0_9GAMM) HSP 1 Score: 50.8 bits (120), Expect = 2.330e-5 Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 22 GSKKTRSRPLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVELT 183
G K S P+V++HG +S W+ + + L AD+Y +DLPG+G SPA E T
Sbjct: 27 GPMKLHSDPIVLVHGWGANSEIWQSLPEKLSEYADVYTIDLPGFGESPAIEEYT 80
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: UPI0007C573C5 (alpha/beta fold hydrolase n=1 Tax=Dactylosporangium aurantiacum TaxID=35754 RepID=UPI0007C573C5) HSP 1 Score: 50.4 bits (119), Expect = 2.810e-5 Identity = 25/75 (33.33%), Postives = 37/75 (49.33%), Query Frame = 1
Query: 16 IRGSKKTRSRPLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVELTSCRNPDRVVDLCLECLGGW 240
I ++ PLV++HG WE + D L D+ +DLPG+GRSPAP + + + +E L GW
Sbjct: 8 IHSVRRGAGEPLVLIHGIGHHWRAWEPVIDLLAEHHDVIAIDLPGFGRSPAPAQ-------NHGMPSAVEALAGW 75
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Match: UPI001E2BADD3 (alpha/beta fold hydrolase n=1 Tax=Thiocapsa bogorovii TaxID=521689 RepID=UPI001E2BADD3) HSP 1 Score: 48.5 bits (114), Expect = 4.370e-5 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 1
Query: 46 PLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGWGRSPAPVELTSCRNPDRVVDLCLE 225
PL+++HG GSS HW+ A L DLY LDLPG G +PA + P+ + L ++
Sbjct: 27 PLLLIHGWGGSSRHWQQTAADLSDIRDLYALDLPGHGETPAR---SGAAGPEAMAGLVID 83 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122833.4693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122833.4693.1 >prot_M-pyrifera_M_contig122833.4693.1 ID=prot_M-pyrifera_M_contig122833.4693.1|Name=mRNA_M-pyrifera_M_contig122833.4693.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp VHSLHIRGSKKTRSRPLVVLHGHSGSSAHWECIADALVHEADLYLLDLPGback to top mRNA from alignment at M-pyrifera_M_contig122833:208..465- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122833.4693.1 ID=mRNA_M-pyrifera_M_contig122833.4693.1|Name=mRNA_M-pyrifera_M_contig122833.4693.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig122833:208..465- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122833:208..465- >mRNA_M-pyrifera_M_contig122833.4693.1 ID=mRNA_M-pyrifera_M_contig122833.4693.1|Name=mRNA_M-pyrifera_M_contig122833.4693.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig122833:208..465- (Macrocystis pyrifera P11B4 male)back to top |