mRNA_M-pyrifera_M_contig122783.4677.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A3B0SYV5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SYV5_9ZZZZ) HSP 1 Score: 207 bits (526), Expect = 2.690e-63 Identity = 99/174 (56.90%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLHGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
DP +VN VMT L+ +VL+YT GGMVSVVITDYLQFV+LS GM+ C + LGW ++V TV VH +PG DPLH GFG SY++WM+F+ G+ S AVWPTAV+R C+A T VRRLY +SS+GF+ RF++PQFLGICAL + W H F DG L +DP+ L+AMP
Sbjct: 129 DPNSVNVVMTVLISLVLVYTILGGMVSVVITDYLQFVVLSIGMIFMCLYGVYTLGWEKIVATVGQVHSDPGFDPLHESGFGPSYVLWMIFTFGLVSCAVWPTAVMRVCAAKDTDVVRRLYRWSSIGFMARFIIPQFLGICALAFLWQHAGPGSDFFAADGSLTNDPDATLRAMP 302
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A6G2JLN4_9BACT (Sodium:solute symporter family protein n=5 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6G2JLN4_9BACT) HSP 1 Score: 209 bits (533), Expect = 3.020e-62 Identity = 106/175 (60.57%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPL-HGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
DP +V VMT +L +V+ YT GGMVSVVITDY+QFV+LSFGM+LTCG+A+ LGW +VETV VHGE G +PL G GFG SYI+WM+F+AG+ S AVW T+V+RAC+A+S VRRLY +SS+GFLIRF++PQFLGICALT+F+N+P F G DP + LQAMP
Sbjct: 159 DPGSVAVVMTVMLALVIAYTIMGGMVSVVITDYIQFVVLSFGMILTCGMAVYALGWPTIVETVASVHGESGFNPLLEGRGFGPSYIMWMIFTAGLVSCAVWQTSVMRACAAESVEVVRRLYRWSSIGFLIRFMIPQFLGICALTFFFNNPEFRGFFFDETGSPTADPTMTLQAMP 333
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A3B0SN87_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SN87_9ZZZZ) HSP 1 Score: 202 bits (514), Expect = 2.910e-61 Identity = 97/171 (56.73%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 10 AVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLHGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
+VN VMT L+ +VL+YT GGMVSVVITDY+QFV+LS GM+ C + LGW ++V TV+ VH EPG DPLH GFG SY++WM+F+ G+ S AVWPTAV+R C+A T VRRLY +SS+GF+ RF++PQFLGICAL + W F DG L DDP+ L+AMP
Sbjct: 1 SVNIVMTVLISLVLVYTILGGMVSVVITDYIQFVVLSIGMIFMCIYGVYTLGWEKIVTTVQQVHSEPGFDPLHESGFGPSYVLWMIFTFGLVSCAVWPTAVMRVCAAKDTEVVRRLYRWSSIGFMARFIIPQFLGICALAFLWQQAGPGSDFFAADGSLTDDPDATLRAMP 171
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A2E3IZ06_9BACT (Uncharacterized protein n=3 Tax=FCB group TaxID=1783270 RepID=A0A2E3IZ06_9BACT) HSP 1 Score: 204 bits (518), Expect = 3.510e-60 Identity = 99/175 (56.57%), Postives = 130/175 (74.29%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLH-GEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
DP V +MT +L++VL YT GGMVSVVITDY+QF++LS G+ TC +++ LGWS +V+TV +HGE G DP H G GFG SY+VWM+F+AGI S AVW T+V+RAC+A+S VR+LY +SS+GFLIRF++PQFLGICAL Y + + TA FT G L+ D +L L A+P
Sbjct: 164 DPTYVAIIMTVMLILVLAYTILGGMVSVVITDYIQFIILSIGITATCAISVYILGWSNIVDTVTSIHGEAGFDPFHEGGGFGPSYVVWMIFTAGIVSCAVWQTSVMRACAAESAEVVRKLYTWSSIGFLIRFMIPQFLGICALVYLYQNETARGIFFTASGALVQDSDLTLHALP 338
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A382F6I3_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382F6I3_9ZZZZ) HSP 1 Score: 196 bits (497), Expect = 1.470e-58 Identity = 100/174 (57.47%), Postives = 129/174 (74.14%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLHGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
DP AV VMT ++++VL YTT GGM++VVITDY+QFV+LS G+L+ LA+ HLGWS +VETV VHG G DPL+ GFG SY+ WM F G+ + +VW TAV+RAC+A+S VRRLY +SS+GF+IRF++PQFLGICAL Y +NHP A F+ DG +I P +QAMP
Sbjct: 18 DPMAVKIVMTVMILLVLTYTTLGGMIAVVITDYIQFVVLSIGLLIAVILAVVHLGWSDIVETVGTVHGTAGFDPLNDAGFGPSYVTWMFF-IGVVACSVWQTAVMRACAAESVEVVRRLYIWSSIGFMIRFIIPQFLGICALVYLFNHPEAKAMFFS-DGAII--PEKSMQAMP 187
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A382MQ37_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382MQ37_9ZZZZ) HSP 1 Score: 189 bits (480), Expect = 9.650e-57 Identity = 95/145 (65.52%), Postives = 119/145 (82.07%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPL-HGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTY 432
DP +V VMT +L +VLIYT GGMVSVVITDY+QFV+LSFG++L G+A+ LGWS +VETV VHGE G +PL G GFG SY++WM+F+AG+ S AVW TAV+RAC+A+ST V++LY +SS+GFLIRF+VPQFLGICALTY
Sbjct: 159 DPTSVALVMTVMLALVLIYTILGGMVSVVITDYIQFVVLSFGIILASGIAIAKLGWSSIVETVVTVHGEAGFNPLVEGSGFGPSYVMWMIFTAGLVSCAVWQTAVMRACAAESTEVVKKLYMWSSIGFLIRFMVPQFLGICALTY 303
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A2E6AEE9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E6AEE9_9PLAN) HSP 1 Score: 194 bits (492), Expect = 2.210e-56 Identity = 94/174 (54.02%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLHGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
DP VN+VM L+ +VL YT GGMVSVVITDY+QFV+L+FGML+ C +A+ WS +V TVE VHG G +P+ G FG +YI WM+ GI S AVWPTAV+R C+A++ VRRLY++SS+GF+ RF++PQFLGICALT+FW F DG+++ D + L+AMP
Sbjct: 161 DPMIVNFVMVLLIALVLSYTILGGMVSVVITDYIQFVVLAFGMLVCCIIAITKTDWSSIVSTVERVHGAGGFNPMEGSVFGPTYITWMIIVFGIGSCAVWPTAVMRVCAAENPQVVRRLYSWSSIGFMTRFIIPQFLGICALTFFWERMGPDSLFFDADGKIVSDVDQTLKAMP 334
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A2E4ABU2_9BACT (Uncharacterized protein n=2 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2E4ABU2_9BACT) HSP 1 Score: 188 bits (478), Expect = 2.510e-54 Identity = 92/174 (52.87%), Postives = 132/174 (75.86%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLHGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
+ AV WVMTA++++VLIYT GGM+SV+ITDY+QFV+LS G+L+TC +A+ +GWS LV+ V+ ++ + G +PL EG G SY+VWM F G+ S AVW TAV+RAC+A+S V+++Y +SSLGF+IRFL+PQF+GICAL YF++ +A F GQ+ +D N+ ++AMP
Sbjct: 157 NEDAVKWVMTAMILLVLIYTCLGGMISVIITDYVQFVVLSIGLLVTCVIAVKKIGWSTLVKGVDAIYSDQGFNPLIAEGIGGSYVVWMFF-LGVISCAVWQTAVMRACAAESVEVVKKMYIWSSLGFMIRFLIPQFIGICALVYFFDLGSAQP-FFDEQGQVSNDSNVTMKAMP 328
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A2D8Z4I3_9BACT (Uncharacterized protein n=6 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2D8Z4I3_9BACT) HSP 1 Score: 187 bits (474), Expect = 9.750e-54 Identity = 92/174 (52.87%), Postives = 129/174 (74.14%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLHGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
D AV WVMTA++++VLIYT GGM+SV+ITDY+QFV+LS G+L+TC +A+ +GWS LV+ V+ ++ E G +P G G SY+ WM F G+ S AVW TAV+RAC+A+S V+++Y +SSLGF+IRFL PQF+GICAL YF++ +A F GQ+ +DPN+ ++AMP
Sbjct: 157 DGDAVKWVMTAMILLVLIYTXLGGMISVIITDYVQFVVLSIGLLVTCVIAVQKIGWSTLVKGVDTIYSEQGFNPFIAGGIGGSYVAWMFF-LGVISCAVWQTAVMRACAAESVEVVKKMYIWSSLGFMIRFLXPQFIGICALVYFFDMGSAQP-FFDGQGQVSNDPNVTMKAMP 328
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Match: A0A3E0NLR5_9BACT (Sodium:solute symporter family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3E0NLR5_9BACT) HSP 1 Score: 186 bits (471), Expect = 3.910e-53 Identity = 96/174 (55.17%), Postives = 117/174 (67.24%), Query Frame = 1
Query: 1 DPQAVNWVMTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQLVETVELVHGEPGVDPLHGEGFGASYIVWMLFSAGICSGAVWPTAVIRACSADSTATVRRLYAFSSLGFLIRFLVPQFLGICALTYFWNHPTAHDQLFTVDGQLIDDPNLQLQAMP 522
P AV WVMT LLV+VL Y + GGM++VV+TDY+QFVLLS G+L+ C +AL G LVE V+ VHG G DPLHG+GFG Y+VWM+F+AG+ S A+W TAV+RACSA+S VRR Y SS+GFL RFLVP FLG+CAL W A + G DP L MP
Sbjct: 177 SPLAVKWVMTVLLVLVLFYVSVGGMLAVVVTDYIQFVLLSIGLLVACVVALRRFGIDSLVEAVQQVHGPAGFDPLHGDGFGLGYVVWMVFTAGLVSCAIWQTAVVRACSAESVEVVRRTYQISSIGFLARFLVPNFLGVCALA--WVVADAGRSAVFLPGGRPADPETTLAVMP 348 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122783.4677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122783.4677.1 >prot_M-pyrifera_M_contig122783.4677.1 ID=prot_M-pyrifera_M_contig122783.4677.1|Name=mRNA_M-pyrifera_M_contig122783.4677.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp MTALLVMVLIYTTFGGMVSVVITDYLQFVLLSFGMLLTCGLALNHLGWSQback to top mRNA from alignment at M-pyrifera_M_contig122783:2..523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122783.4677.1 ID=mRNA_M-pyrifera_M_contig122783.4677.1|Name=mRNA_M-pyrifera_M_contig122783.4677.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig122783:2..523+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122783:2..523+ >mRNA_M-pyrifera_M_contig122783.4677.1 ID=mRNA_M-pyrifera_M_contig122783.4677.1|Name=mRNA_M-pyrifera_M_contig122783.4677.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig122783:2..523+ (Macrocystis pyrifera P11B4 male)back to top |