mRNA_M-pyrifera_M_contig122726.4668.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A1R2CZ17_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CZ17_9CILI) HSP 1 Score: 72.4 bits (176), Expect = 2.510e-12 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 34 PKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHLIF 231
P + G+L+ RS ++R P+R+NLDRR L+ +PLLEGE RLRLLN Q NLIS I NL L +LIF
Sbjct: 94 PGLTGVLVVYRSPSERNTNPERLNLDRRDLTQMPLLEGEERLRLLNYQHNLISKIENLLSLPNLIF 159
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A1R2C674_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C674_9CILI) HSP 1 Score: 72.4 bits (176), Expect = 2.510e-12 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 34 PKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHLIF 231
P +PG+L+ R ++R P+R+NLDRR L+ +PLLEGE RLRLLN Q N IS I NL L +LIF
Sbjct: 99 PGLPGVLVVYRKPSERNSNPERLNLDRRELTQMPLLEGEERLRLLNYQHNFISKIENLLSLPNLIF 164
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A0M0K973_9EUKA (Leucine-rich repeat-containing protein 49 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K973_9EUKA) HSP 1 Score: 69.7 bits (169), Expect = 8.330e-12 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 55 IAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHLIF 231
+ RS+A+R P+R+NLDRRGL++ PLL+GE RLRLLN Q N I+ ISNL L +LIF
Sbjct: 6 VVSRSQAERLASPERLNLDRRGLTACPLLQGEERLRLLNYQNNAIAEISNLHTLPYLIF 64
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A3N0Y7R0_ANAGA (Leucine-rich repeat-containing protein 49 n=3 Tax=Xenocypridinae TaxID=2743747 RepID=A0A3N0Y7R0_ANAGA) HSP 1 Score: 67.4 bits (163), Expect = 1.440e-10 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 76 DRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHLIF 231
D CP+R++LDRRGL+S+P L+G +LRLLNMQ NLIS + +L HL HL+F
Sbjct: 154 DITSCPERLDLDRRGLTSIPDLDGSEKLRLLNMQHNLISHLQDLVHLRHLVF 205
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A7S3MZQ2_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3MZQ2_9SPIT) HSP 1 Score: 66.6 bits (161), Expect = 2.320e-10 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 34 PKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHLI 228
P++PG+L+ R ++R P R+NLD+R L+ +PLLEGE RLRLLN+Q N I I NL L LI
Sbjct: 100 PQIPGVLVVYRKPSERNANPDRLNLDKRELNHMPLLEGEERLRLLNLQHNHIQKIENLVSLPALI 164
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A3M6U5U5_POCDA (Uncharacterized protein n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6U5U5_POCDA) HSP 1 Score: 65.1 bits (157), Expect = 9.330e-10 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 7 PAQATVF-QSPKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHL 225
P +F +SP PG+ I R +R+ P R+NLDRR L++ P+LEGE LRLLN Q NLIS +S+L +L L
Sbjct: 158 PGDRVIFAESPSFPGVPIVYRLPEERQANPDRLNLDRRRLTTCPILEGEDYLRLLNFQHNLISRVSHLENLKRL 231
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A7S1XLY3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLY3_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 9.490e-10 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 7 PAQATVFQSPK-VPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHLIF 231
P+ VF + P +L+ R+E +R P+R+NLDRR L+S P+LE E RL+LLN Q N IS+++ L L++LIF
Sbjct: 223 PSDGIVFSHVRGQPSVLVVYRTEGERNANPERLNLDRRQLTSCPILENEDRLKLLNYQNNYISSVTALEPLTNLIF 298
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A1W0A1R4_9STRA (Outer Dynein Arm Light Chain 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1R4_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.270e-9 Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 13 QATVFQSPKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTISNLTHLSHL 225
+ T ++P +PG+ + RS+ R P+R+NLDRR L +PLLEGE LRLLN+Q N I I NL L +L
Sbjct: 243 EITFGETPDIPGVPVVFRSQKSRNSDPERLNLDRRALKIIPLLEGEHLLRLLNLQNNGIVGIDNLLGLPNL 313
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: Q7PYM5_ANOGA (AGAP002013-PA n=8 Tax=gambiae species complex TaxID=44542 RepID=Q7PYM5_ANOGA) HSP 1 Score: 63.5 bits (153), Expect = 3.370e-9 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 4 PPAQATVFQSPKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLIS 192
PP +T+ VP + +RSE DR P R+NLDR+GLSS+PL+E EP LRLL++Q NLI+
Sbjct: 161 PPLDSTLIVQNGVPSI---RRSEKDREKHPDRVNLDRKGLSSIPLIEDEPNLRLLSLQHNLIN 220
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Match: A0A6G0X9W4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9W4_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 4.430e-9 Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 28 QSPKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEPRLRLLNMQGNLISTI 198
++P +PG+ + RSE + P+R+NLDRR L +PLLEGE LRLLN+Q NLI+TI
Sbjct: 273 ETPDIPGVPVVYRSERAKSANPERLNLDRRSLKVMPLLEGEHMLRLLNLQNNLITTI 329 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122726.4668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122726.4668.1 >prot_M-pyrifera_M_contig122726.4668.1 ID=prot_M-pyrifera_M_contig122726.4668.1|Name=mRNA_M-pyrifera_M_contig122726.4668.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp LPPAQATVFQSPKVPGLLIAKRSEADRRDCPQRINLDRRGLSSVPLLEGEback to top mRNA from alignment at M-pyrifera_M_contig122726:37..480+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122726.4668.1 ID=mRNA_M-pyrifera_M_contig122726.4668.1|Name=mRNA_M-pyrifera_M_contig122726.4668.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig122726:37..480+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122726:37..480+ >mRNA_M-pyrifera_M_contig122726.4668.1 ID=mRNA_M-pyrifera_M_contig122726.4668.1|Name=mRNA_M-pyrifera_M_contig122726.4668.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig122726:37..480+ (Macrocystis pyrifera P11B4 male)back to top |