mRNA_M-pyrifera_M_contig122703.4664.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A165HHX9_EXIGL (DNA polymerase (Fragment) n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165HHX9_EXIGL) HSP 1 Score: 75.1 bits (183), Expect = 6.030e-13 Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 1
Query: 4 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQEYTSEALLTQLQYLQALFSLDRFREKHTDENSEERLHAEAYASTW-RGLEEEVLLYLKHNARNHIDCGSLFS 408
C L ++ Q+ + + IA+YY +VC+DS+C HRTR + + G RC P C G V EY+ AL TQL Y ++LF D+ K EE A T + L+ V +L N R+ +D G LFS
Sbjct: 1268 CKTQLQIPSVQTQLEVQIRDHIARYYQMWMVCQDSTCGHRTRMMGVYG--KRCLRPTCAGSVVMEYSDLALYTQLLYYRSLFDGDKAVNKAKGAKQEELRALVALNHTMLQALQASVDRFLDMNGRHWVDMGELFS 1401
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: UPI00142562F2 (DNA polymerase alpha catalytic subunit-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142562F2) HSP 1 Score: 72.4 bits (176), Expect = 5.280e-12 Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 1
Query: 31 ISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDEN 288
I NQ+R++V RC+ KYY+ LVCED+SC HRTR V + P C+ + + EYTS+AL TQL+Y + +F R + + D++
Sbjct: 1351 IKNQLRMMVRRCVTKYYDGWLVCEDTSCNHRTRCVPINPQRHGLPCPVCQRALLKPEYTSKALYTQLRYFKFIFDAHRAIQSNKDKS 1437
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A8H3HQI7_9AGAM (DNA polymerase n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3HQI7_9AGAM) HSP 1 Score: 67.4 bits (163), Expect = 2.930e-10 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 1
Query: 4 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGC--KGYVFQEYTSEALLTQLQYLQALFSLDRFREKH--TDENSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFS 408
C + S ++ Q+ + + I +YY+ +VC+DS+C HRTR + + G RC PGC KG V EY+ L QL Y +LF+ D+ EK T N+E + + + V YL +R ++ G+LFS
Sbjct: 1318 CSQEFSLASVQVQLETQLRQQINQYYSGWMVCQDSTCGHRTRGMSVYG--ERCLNPGCATKGPVSYEYSDMKLYNQLLYYMSLFNGDKAIEKAAGTSRNAEVMALVGLNSDFLTAMTKCVEKYLNQCSRRWVEMGTLFS 1454
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A7M7NKZ9_STRPU (DNA polymerase n=4 Tax=Echinacea TaxID=7674 RepID=A0A7M7NKZ9_STRPU) HSP 1 Score: 65.5 bits (158), Expect = 1.370e-9 Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 31 ISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDENSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLF 405
+ N++RLL + KYY L+CED+SC HRTR + L P C+ V + EY+ + L TQL + Q +F ++ ++ D+ + + ++ L++ + + L NA + +D LF
Sbjct: 1353 LGNKLRLLTRSYVQKYYAGWLICEDTSCAHRTRRLPLNPHRQGFVCPVCQRAVLRPEYSDKELYTQLCFFQTIFDYEKALTENNDKAKSRSQEPASVRAAYQTLKQIIDVRLAANAYSEVDLSKLF 1478
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: UPI0018D8091E (DNA polymerase alpha catalytic subunit-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8091E) HSP 1 Score: 64.7 bits (156), Expect = 2.550e-9 Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 37 NQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDE-----NSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFSVFAGLAL 429
N++ LL+ I KYY +VCED+SC H+TR L P C+ + + EYT + L Q+ +LQ++F +DR ++ T+ N R H ++Y+ ++++ L+ N + +D LFS + L L
Sbjct: 1377 NRLNLLIRGYIQKYYAGWMVCEDTSCAHKTRRTPLNPQRQGFMCPVCQRAILKPEYTDKDLYYQMSFLQSIFDVDRAMKRLTENEKTFANMALRDHLDSYSRLRNFMDKK----LRQNKYSEVDLSRLFSGMSTLVL 1509
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A1E3P9G2_WICAA (DNA polymerase n=1 Tax=Wickerhamomyces anomalus (strain ATCC 58044 / CBS 1984 / NCYC 433 / NRRL Y-366-8) TaxID=683960 RepID=A0A1E3P9G2_WICAA) HSP 1 Score: 63.5 bits (153), Expect = 6.400e-9 Identity = 41/148 (27.70%), Postives = 69/148 (46.62%), Query Frame = 1
Query: 4 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQEYTSEALLTQLQYLQALFSLDR-----FREKHTDENSEERLH---------AEAYASTWRGLEEEVLLYLKHNARNHIDCGSLF 405
C +S + +S+Q+ + IAKYY V+VC+DS+C T+ + + G RC GCKG + +Y+ + L QL Y +LF + + R + E+ + +E + + V YL R ++D GS+F
Sbjct: 1229 CESQISTLGVSSQLEHRIRSFIAKYYQGVVVCDDSTCGMTTKQISVYG--KRCLSHGCKGVMRYKYSDKELYNQLLYFDSLFDVSKNKTQSLRPLYDSEDKSQPTPMIKGQIDALSEQNRENFEVFKSVVQKYLSDCGRRYVDMGSMF 1374
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: UPI0014550DCC (DNA polymerase alpha catalytic subunit-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550DCC) HSP 1 Score: 63.2 bits (152), Expect = 8.760e-9 Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 1
Query: 31 ISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDENS-----EERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFSVFAGLAL 429
+SN++ LL+ I +YY +VCED+SC HRTR L P C+ V + EYT ++L QL + Q++F +DR +K ++ R H E YA L+++ LK + + +D LFS + L
Sbjct: 1371 MSNRLNLLIRGYIQRYYAGWMVCEDTSCAHRTRRTPLNPQRQGFICPVCQRAVLKPEYTDKSLYYQLSFFQSIFDVDRAIKKLSEGEKGFASVAVRDHLENYARLRNFLDKK----LKQSKYSEVDLTRLFSGLTTMVL 1505
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A7L3LGT0_9CHAR (DNA polymerase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7L3LGT0_9CHAR) HSP 1 Score: 62.8 bits (151), Expect = 1.190e-8 Identity = 41/140 (29.29%), Postives = 76/140 (54.29%), Query Frame = 1
Query: 25 VAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALF----SLDRFREKHTDENSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFSVFAGLAL 429
V ++N++ L + RCI KYYN L+CE+ +C +RTR + L + CK V + EY+ +AL TQL + + +F ++D+ + E S++ + E + ++ L+ V L + + ++ G LF++ G A+
Sbjct: 1343 VQMNNKLLLDIRRCIRKYYNGWLICEEPTCRNRTRQLPLNFSRSGPMCQACKKAVLRPEYSDKALYTQLCFYRYIFDVDYAVDKVAAEEGKEYSKKNMRPEI-SEAYKSLKSTVDKCLSTSGYSEVNLGKLFTISIGRAV 1481
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A8I2YDY3_9AGAM (DNA-directed DNA polymerase n=1 Tax=Boletus reticuloceps TaxID=495285 RepID=A0A8I2YDY3_9AGAM) HSP 1 Score: 61.2 bits (147), Expect = 3.720e-8 Identity = 42/141 (29.79%), Postives = 64/141 (45.39%), Query Frame = 1
Query: 4 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ----EYTSEALLTQLQYLQALFSLDRFREKHTDENS---EERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLF 405
C L ++ Q+ + + CIA+YY +VC D++C HRTR++ + G C PGC EY L QL+Y LF D+ + K T N+ E R+ E + + V Y+ R +D +LF
Sbjct: 446 CNHLFGRASLQTQLEVQIRACIARYYQAWIVCNDTTCGHRTRSMSVYG--RHCVRPGCPSASDSSARLEYPDVELYNQLRYFAMLFDADKAK-KATIGNARFDEVRVLTETNQTFLEAMSGTVDKYINQCGRRWVDFKALF 583
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A287CT85_ICTTR (DNA polymerase n=1 Tax=Ictidomys tridecemlineatus TaxID=43179 RepID=A0A287CT85_ICTTR) HSP 1 Score: 61.2 bits (147), Expect = 3.870e-8 Identity = 38/139 (27.34%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 7 GELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGC-KGYVFQEYTSEALLTQLQYLQALFSLDRFREKHTDENSEERLHAEAYA----STWRGLEEEVLLYLKHNARNHIDCGSLFS 408
L V +SN++ + + RCI KYY+ L+CE+++C +RTR + L+ P C K + EY+ ++L TQL + + +F +D EK ++ +E+L + + +R L+ +L + + ++ LF+
Sbjct: 623 SPLTFTVQMSNKLIMDIRRCIKKYYDGWLICEEAACRNRTRHLPLQFSRNGPLCPACMKAILKPEYSDKSLYTQLCFYRYIFDVDYALEKLITDHEKEKLKKQFFTPKVLQDYRKLKNTAEQFLSWSGYSEVNLSKLFA 761 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122703.4664.1 >prot_M-pyrifera_M_contig122703.4664.1 ID=prot_M-pyrifera_M_contig122703.4664.1|Name=mRNA_M-pyrifera_M_contig122703.4664.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp SCGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGback to top mRNA from alignment at M-pyrifera_M_contig122703:81..515- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122703.4664.1 ID=mRNA_M-pyrifera_M_contig122703.4664.1|Name=mRNA_M-pyrifera_M_contig122703.4664.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig122703:81..515- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122703:81..515- >mRNA_M-pyrifera_M_contig122703.4664.1 ID=mRNA_M-pyrifera_M_contig122703.4664.1|Name=mRNA_M-pyrifera_M_contig122703.4664.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig122703:81..515- (Macrocystis pyrifera P11B4 male)back to top |