mRNA_M-pyrifera_M_contig122611.4656.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: A0A2G2D6Y2_9SPHN (EamA family transporter n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A2G2D6Y2_9SPHN) HSP 1 Score: 301 bits (770), Expect = 1.460e-100 Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALINV 525
KDQIS VPP WSVSYRF++AAAAMFVLAA KRL FRLDR GY LALI+G FQF+FN NFVYNAE FITSGLVAVLFALLMVPNAI GRIFLGH++ APFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGI+SAS+ANVMQAG+RLK+YPIITVLAWAMLFGALIN+
Sbjct: 35 KDQISEVPPSWSVSYRFLIAAAAMFVLAAFKRLSFRLDRIGYLLALILGFFQFTFNFNFVYNAELFITSGLVAVLFALLMVPNAILGRIFLGHKVNAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGIMSASVANVMQAGQRLKTYPIITVLAWAMLFGALINI 209
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: A0A127MCM1_9SPHN (Multidrug transporter n=6 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A127MCM1_9SPHN) HSP 1 Score: 292 bits (748), Expect = 3.200e-97 Identity = 152/175 (86.86%), Postives = 160/175 (91.43%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALINV 525
KDQIS VPP WSVSYRFI+AAAAMFVL A KRL FRLDRTGY ALI+GLFQFSFN NFVYNAE FITSGLVAVLFALLMVPNAI GRIFLGH+I+ FLGGSAIAA GIA+LFWHEYRASPASLEQVL+GA+L F GILSASIANVMQAG+RLKSYPIITVLAWAMLFGALINV
Sbjct: 35 KDQISEVPPSWSVSYRFIIAAAAMFVLVAYKRLSFRLDRTGYLFALILGLFQFSFNFNFVYNAELFITSGLVAVLFALLMVPNAILGRIFLGHKISGAFLGGSAIAATGIALLFWHEYRASPASLEQVLIGASLAFCGILSASIANVMQAGERLKSYPIITVLAWAMLFGALINV 209
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: A0A6H2DJ94_9SPHN (EamA family transporter n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DJ94_9SPHN) HSP 1 Score: 278 bits (711), Expect = 1.330e-91 Identity = 142/175 (81.14%), Postives = 159/175 (90.86%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALINV 525
KDQIS V P WSVSYRF++AAAAMFVL ++ PFRLDRTG LA+I+G FQF+FN NFVYNAE +ITSGLVAVLFALLMVPNA+ GRIFLGH+IT FLGGSAIAAVGIAMLF HEYRASPASLEQVLLGAALTFGGI+SASIANVMQAG+RLK+YPII++LAWAML+GALIN+
Sbjct: 35 KDQISDVAPSWSVSYRFLIAAAAMFVLVGIRKHPFRLDRTGQILAVILGFFQFTFNFNFVYNAELYITSGLVAVLFALLMVPNAVLGRIFLGHKITGAFLGGSAIAAVGIAMLFLHEYRASPASLEQVLLGAALTFGGIMSASIANVMQAGERLKAYPIISILAWAMLWGALINI 209
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: UPI000D68A9FF (EamA family transporter n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI000D68A9FF) HSP 1 Score: 255 bits (651), Expect = 1.480e-82 Identity = 132/175 (75.43%), Postives = 148/175 (84.57%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALINV 525
KDQIS VPP WSVSYRF++AAAAMFVL KRLPFRL G A++IG+ QFSFN NFVYNAE +ITSGLVAVLFALLMVPNAI GRIFLG RI A FL GSAIAAVGIA+LFWHEY++SPA+L V+LG ALT GGILSAS+ANVMQA RLKSYPI+T+LAWAM +GA IN+
Sbjct: 35 KDQISDVPPSWSVSYRFMIAAAAMFVLVGFKRLPFRLGMKGQFWAVLIGIAQFSFNFNFVYNAELYITSGLVAVLFALLMVPNAILGRIFLGQRINAAFLAGSAIAAVGIALLFWHEYKSSPATLADVILGVALTVGGILSASVANVMQALPRLKSYPILTLLAWAMFWGAAINI 209
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: A0A1B6Z4I1_9SPHN (Multidrug transporter n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z4I1_9SPHN) HSP 1 Score: 246 bits (627), Expect = 7.260e-79 Identity = 124/175 (70.86%), Postives = 148/175 (84.57%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALINV 525
KDQI VPP WSV+YRF++AAAAMFVL A ++ PFRL+R G A++IG+ QFSFN NFVYNAE +ITSGLVAV+FALLMVPNAI GRIFLG +I F+ GSAIAAVGIAMLFWHEY+ASPA+LE+V+LG T GILSAS+ANVMQA ++K YPI+T+LAWAML+GALIN+
Sbjct: 35 KDQIGTVPPSWSVAYRFMMAAAAMFVLVAIRKQPFRLNRQGQFWAILIGIAQFSFNFNFVYNAEIYITSGLVAVMFALLMVPNAILGRIFLGQKIGGAFMAGSAIAAVGIAMLFWHEYKASPATLEEVVLGVIFTAAGILSASVANVMQATPKVKVYPILTMLAWAMLWGALINI 209
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: UPI001E44F431 (DMT family transporter n=1 Tax=Parasphingorhabdus litoris TaxID=394733 RepID=UPI001E44F431) HSP 1 Score: 241 bits (614), Expect = 5.980e-77 Identity = 124/175 (70.86%), Postives = 142/175 (81.14%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALINV 525
KDQIS VPP WSVSYRF++A+ AMF L KRLPFRL G A++IG+ QFSFN NFVY AE +ITSGLVAVLFALLMVPNA+ GRIFLG +I F+ GSAIAAVGIA+LFWHEY +SPA+L VLLG ALT GILSASIANVMQA +LKSYPI+T+LAWAM +GA IN+
Sbjct: 35 KDQISEVPPSWSVSYRFVIASLAMFALVGFKRLPFRLGAKGQFWAILIGVAQFSFNFNFVYYAELYITSGLVAVLFALLMVPNALLGRIFLGQQINGAFMAGSAIAAVGIALLFWHEYESSPATLADVLLGVALTVAGILSASIANVMQALPKLKSYPILTLLAWAMFWGAAINI 209
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: A0A1N6DDS4_9SPHN (EamA-like transporter family protein n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6DDS4_9SPHN) HSP 1 Score: 239 bits (611), Expect = 2.530e-76 Identity = 123/174 (70.69%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALIN 522
+DQ+S VPP WSV+YRFI+AAAAMFVL +RLPF +DR G+ A+++GLFQFSFN NFVYNAE +ITSGLVAVLFALLMVPNAI GRIFLG RI A FL GS IAA+G+AMLF HEYR+SP QV+LG LT GGILSAS+AN+MQA + K YPIIT+LAWAML+GA N
Sbjct: 35 RDQVSEVPPIWSVTYRFIIAAAAMFVLVTIRRLPFGIDRRGHFWAILLGLFQFSFNFNFVYNAELYITSGLVAVLFALLMVPNAILGRIFLGQRIKASFLAGSGIAAMGVAMLFVHEYRSSPVPPAQVILGIILTIGGILSASVANIMQALPQPKRYPIITLLAWAMLWGAFFN 208
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: A0A3B0RU56_9ZZZZ (Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0RU56_9ZZZZ) HSP 1 Score: 231 bits (588), Expect = 5.170e-73 Identity = 120/175 (68.57%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALINV 525
KDQI VPP WSV+YRF++AAAAMFVL A ++ PFRL R G A++IG QFSFN FVYNAE +ITSGLVAV+FALLMVPNAI G+ FLG I F+ GSAIAA GIAMLFW EY+AS A+LE VLLG T GGILSAS ANVMQA R+K YPI+T+LAWAML+GA IN+
Sbjct: 35 KDQIGTVPPSWSVAYRFLIAAAAMFVLVAIRKQPFRLGRQGQLWAILIGTAQFSFNFIFVYNAELYITSGLVAVMFALLMVPNAIMGKYFLGQPIGGAFVAGSAIAAAGIAMLFWQEYKASTATLEHVLLGVVFTVGGILSASAANVMQATARVKIYPILTMLAWAMLWGAAINI 209
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: UPI001C63062D (EamA family transporter n=1 Tax=Qipengyuania flava TaxID=192812 RepID=UPI001C63062D) HSP 1 Score: 218 bits (556), Expect = 4.280e-68 Identity = 114/174 (65.52%), Postives = 136/174 (78.16%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALIN 522
+DQIS+VPP WS++YRFIVAA MF LAA +R P L G AL++GLFQF+ N FVYNAERFITSGLVAV+FALL+VPNAIFGR L IT PF+ GSAIAAVG+A+LF HEYR+SPA+LE+VLLGA+LT GGILSAS AN+ QA + K P + +LAW+M G LIN
Sbjct: 34 RDQISSVPPSWSITYRFIVAALGMFALAALRREPLTLVSGGVRWALLLGLFQFTLNFGFVYNAERFITSGLVAVMFALLVVPNAIFGRFLLKQPITGPFVLGSAIAAVGVALLFAHEYRSSPATLEEVLLGASLTVGGILSASAANITQAMEGAKKQPFLALLAWSMTVGVLIN 207
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Match: A0A844Y3L3_9SPHN (EamA family transporter n=4 Tax=Qipengyuania gaetbuli TaxID=266952 RepID=A0A844Y3L3_9SPHN) HSP 1 Score: 216 bits (549), Expect = 4.750e-67 Identity = 112/174 (64.37%), Postives = 135/174 (77.59%), Query Frame = 1
Query: 1 KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLFQFSFNXNFVYNAERFITSGLVAVLFALLMVPNAIFGRIFLGHRITAPFLGGSAIAAVGIAMLFWHEYRASPASLEQVLLGAALTFGGILSASIANVMQAGKRLKSYPIITVLAWAMLFGALIN 522
+DQIS+VPP WS++YRFIVAAA MF+LA + P L R G+ L +GLFQFS N +FVYNAE +ITSGLVAV+FALL+VPNA+ GR LG I F+ GS IAAVG+AMLF HEYRASPA+L +VLLGAALT GGILSAS+AN++QA + K P+ T+LAWAML G IN
Sbjct: 34 RDQISSVPPSWSIAYRFIVAAAGMFILARMRGEPLALPREGWVWVLALGLFQFSLNFSFVYNAEHYITSGLVAVMFALLVVPNAVLGRFVLGQPIRREFVIGSGIAAVGVAMLFAHEYRASPATLGEVLLGAALTLGGILSASVANIVQATEGAKRIPLRTLLAWAMLCGVAIN 207 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122611.4656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122611.4656.1 >prot_M-pyrifera_M_contig122611.4656.1 ID=prot_M-pyrifera_M_contig122611.4656.1|Name=mRNA_M-pyrifera_M_contig122611.4656.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp KDQISAVPPGWSVSYRFIVAAAAMFVLAASKRLPFRLDRTGYALALIIGLback to top mRNA from alignment at M-pyrifera_M_contig122611:2..526- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122611.4656.1 ID=mRNA_M-pyrifera_M_contig122611.4656.1|Name=mRNA_M-pyrifera_M_contig122611.4656.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122611:2..526- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122611:2..526- >mRNA_M-pyrifera_M_contig122611.4656.1 ID=mRNA_M-pyrifera_M_contig122611.4656.1|Name=mRNA_M-pyrifera_M_contig122611.4656.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig122611:2..526- (Macrocystis pyrifera P11B4 male)back to top |