mRNA_M-pyrifera_M_contig122587.4650.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A3M2H8N0_ACTSX (Amidase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H8N0_ACTSX) HSP 1 Score: 221 bits (562), Expect = 5.170e-67 Identity = 114/175 (65.14%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVDLELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMFGEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
A++ DLGCAVVA ET EIV AAA EL+AA G +R+++E R+P M G WGLTG++G+R+ LG+RWP CA +LTG+MR + AE L LDA+V AE RR E N AMAE+FG+VDV+ AATNP TAF AE LPSVFGG+E+ GNNGALT P+NI+GN A+SVPAG ASDGLPVGL
Sbjct: 277 AVIVDLGCAVVADETAEIVEAAAAELIAATGMRRLEVESRVPSMAGPWGLTGTVGVRRSLGERWPACAGELTGMMRRGLEVAEKRLGLDALVAAENRRIECNEAMAELFGQVDVIFAATNPDTAFDAEGRLPSVFGGKESTPGNNGALTIPANIYGNPAISVPAGTASDGLPVGL 451
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A7X6AUF0_9ACTN (Amidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AUF0_9ACTN) HSP 1 Score: 215 bits (548), Expect = 5.550e-66 Identity = 118/188 (62.77%), Postives = 138/188 (73.40%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVDLELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMFGEVDVVLAATNPSTAFGAED-------------PLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
A+VPDLG AVVAPET G +RVDL+LRLP +MG W LTGS+G R+ELGDRWP+CA+ LTG+MRA VR AE LDLDA+V+AE+RR ELN AMA++F +VDVV+AATNPSTAF AE LPS FGG EA GNNGALTAPSNI+GN A+S+PAG+ASDGLPVGL
Sbjct: 171 AVVPDLGSAVVAPETXXXXXXXXXXXXXXAGLRRVDLDLRLPNIMGAWSLTGSVGTRRELGDRWPDCADQLTGMMRAGVRQAEERLDLDALVRAESRRVELNEAMADLFEQVDVVMAATNPSTAFDAEGRXXXXXXXXXXXXXLPSHFGGLEATPGNNGALTAPSNIYGNPAISLPAGLASDGLPVGL 358
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A2D8GH13_9ACTN (Amidase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GH13_9ACTN) HSP 1 Score: 214 bits (545), Expect = 9.780e-65 Identity = 111/175 (63.43%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVDLELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMFGEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
A+VPDL CAVV PETE ++VAAAE L A G RV+++LRLP++MG WG TG +G+R LGDRWPECA L GL RA R+A + AM +AE+RR E N AMA MF +VD+VLAATNPSTAFGA LP F RE+N GNNGALTAPSNI+GN A+++PAG+ASDGLPV L
Sbjct: 257 AVVPDLSCAVVGPETEXLIVAAAEXLXARCGMXRVEIDLRLPKIMGVWGATGGVGIRISLGDRWPECAPGLGGLERAGQRAAXXGFTIXAMARAESRRAEFNXAMAAMFDQVDIVLAATNPSTAFGAXGHLPGTFESRESNPGNNGALTAPSNIYGNPAIALPAGLASDGLPVSL 431
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A7C1UJP2_9ACTN (Amidase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UJP2_9ACTN) HSP 1 Score: 175 bits (443), Expect = 7.740e-51 Identity = 93/172 (54.07%), Postives = 122/172 (70.93%), Query Frame = 1
Query: 10 PDLGCAVVAPETEEIVVAAAEELLAAMGAQRVDLELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMFGEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
P LG AVV+ ET E+V AAE L++ G RVD E+R+P + G W ++G +GLR LGDRWP+ A DLT + + AE H DLDA V+ E RR EL AMA++F VD+++AATNP +AF A+ LP+VFGG+EA GNNGALT P+NI+G+ A+S+P G S GLPVG+
Sbjct: 129 PTLGGAVVSDETIELVTEAAERLISVAGLARVDEEVRIPEVTGAWSISGVVGLRLALGDRWPDRAGDLTPGLSRGLAYAEEHFDLDAQVRFERRRTELFEAMADLFDRVDLIVAATNPHSAFAADGRLPTVFGGKEAKVGNNGALTIPANIYGSPAVSIPIGTDSRGLPVGM 300
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A7Y2D8L4_9ACTN (Amidase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D8L4_9ACTN) HSP 1 Score: 169 bits (427), Expect = 3.340e-47 Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVDLELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMFGEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
A++P+ AVVA ET E+V+ AAE L+AA G RVD++ ++P+ WG +G +GL + DRWP+CA+DLTGLMR+ V +A D A V++E R E+N MA +F D V+ ATNP AF A+ LPS FGG+ A+ NNGALT PSNI+GN A+SVP G + DGLPVGL
Sbjct: 257 AVIPEFAGAVVADETIELVLEAAEWLIAAAGLSRVDVDFKVPKGGAMWGASGGVGLFNTVMDRWPDCADDLTGLMRSGVENAINGYDATAAVRSERARVEVNEGMANLFAATDFVMTATNPDVAFEADGRLPSEFGGKPASPINNGALTIPSNIYGNPAISVPIGFSHDGLPVGL 431
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A4R7I0P7_9ACTN (Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I0P7_9ACTN) HSP 1 Score: 158 bits (399), Expect = 5.560e-43 Identity = 92/180 (51.11%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVD-LELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMF----GEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
A+V D G AVV+P E++ AA+ L+A G RVD ++ LPRM W + S+GL +LG+RWPECA+ LT +R S+ + DA +K E RR ELN AMA +F G VD V+ A+NP AF A+ PLP VFGG EA +GNNG LT P+N+HGN A+SVPAG DGLP+GL
Sbjct: 264 AVVADWGSAVVSPVMWELLEEAADRLIADCGMVRVDDVDTALPRMGAAWSVANSVGLIDKLGERWPECADQLTPEIRFSMEHGAPNYGADARIKLERRRSELNEAMARIFDTASGGVDFVMTASNPDIAFAADGPLPGVFGGVEAGAGNNGKLTFPANLHGNPAISVPAGQV-DGLPIGL 442
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A7K0Y8R5_9ACTN (Amidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0Y8R5_9ACTN) HSP 1 Score: 151 bits (381), Expect = 1.830e-41 Identity = 86/176 (48.86%), Postives = 115/176 (65.34%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVD-LELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMFGEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
AIV + G AVV+P E+++ +A+ L+ G +RVD ++ LPRM W ++G + + + L D WP+CA+ LT MRA + +A K E RR +N MAE+F +VD+V+AATNP AF AE PLPSVFGG +A +GNNG LT P N+HGN +SVPAG DGLPVGL
Sbjct: 137 AIVDNWGGAVVSPTMWEVLLESADFLIQKAGLRRVDGVDTSLPRMGAAWSISGMLEIAEALKDHWPQCADVLTPEMRAGLEYTAGLYSAEARAKIEDRRAAVNTRMAEIFNDVDIVIAATNPDVAFDAEGPLPSVFGGIKAGAGNNGQLTFPCNLHGNPGVSVPAGFV-DGLPVGL 311
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A6I3GEH8_9ACTN (Amidase n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I3GEH8_9ACTN) HSP 1 Score: 152 bits (385), Expect = 4.860e-41 Identity = 85/176 (48.30%), Postives = 114/176 (64.77%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVD-LELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMFGEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
AIVPD G AVV+P +++ AA+ L+A+ +R+D + LPRM W ++G I + LGD WP CA+DLT MR ++ E + K E RR +N+ MAE+F +VD+V+ A+NP AF AE PLP+ FGG +A +GNNG LT P N+HGN +SVPAG DGLPVGL
Sbjct: 256 AIVPDWGGAVVSPAMWNVLLEAADHLVASAKLRRIDGVNTALPRMGAAWSISGMIEIASALGDMWPACADDLTPEMRMGLQLTEGRYNATERAKIEARRTAVNMRMAEIFQQVDLVITASNPDVAFIAEGPLPNTFGGVKAGAGNNGLLTFPCNLHGNPGISVPAGTV-DGLPVGL 430
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A6N2DS22_9ACTN (Amidase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DS22_9ACTN) HSP 1 Score: 150 bits (379), Expect = 3.820e-40 Identity = 85/180 (47.22%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVD-LELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMF----GEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
A+VPD G A V+P E++ AA L+ G RVD ++ LPRM G W ++G I + +LGD WP+CA+DLT +R+ ++ + +A + E RR ELN +MA +F G +D+V+ A+NP AF A+ PLP VFGG EA +GNNG LT P+N+HGN A+S+PAG DGLP+GL
Sbjct: 258 AVVPDWGGATVSPVMWELLEEAAIALIDDAGLVRVDGVDTNLPRMGGAWSISGMIEIAADLGDLWPDCADDLTPEIRSGLQRTQGLYSAEARSRIERRRSELNESMARIFDPAAGGIDLVITASNPDVAFDADGPLPGVFGGIEAGAGNNGLLTFPANLHGNPAVSIPAGTL-DGLPIGL 436
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Match: A0A2E0RRZ8_9ACTN (Amidase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RRZ8_9ACTN) HSP 1 Score: 149 bits (376), Expect = 1.360e-39 Identity = 88/180 (48.89%), Postives = 117/180 (65.00%), Query Frame = 1
Query: 1 AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVD-LELRLPRMMGTWGLTGSIGLRKELGDRWPECAEDLTGLMRASVRSAEAHLDLDAMVKAETRREELNIAMAEMF----GEVDVVLAATNPSTAFGAEDPLPSVFGGREANSGNNGALTAPSNIHGNAALSVPAGVASDGLPVGL 525
A+V D G AVV+P E++ AAA++L+A G RVD ++ LPRM W + S+GL + L WP+CA+ LT +R S++ +A +K E RR ELN AMA +F G VD V+ A+NP AF A+ PLPSVFGG E +GNNG LT P+N+HGN A+S+PAG DGLP+GL
Sbjct: 270 AVVADWGDAVVSPVMWELLEAAADQLIADCGMVRVDDVDTHLPRMGAAWSVANSVGLIERLEAFWPDCADQLTPEIRYSMQHGAPAYGAEARIKLERRRSELNEAMARIFDVDSGGVDFVMTASNPDVAFDADGPLPSVFGGVEGGAGNNGRLTFPANLHGNPAISIPAGQV-DGLPIGL 448 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122587.4650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122587.4650.1 >prot_M-pyrifera_M_contig122587.4650.1 ID=prot_M-pyrifera_M_contig122587.4650.1|Name=mRNA_M-pyrifera_M_contig122587.4650.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp AIVPDLGCAVVAPETEEIVVAAAEELLAAMGAQRVDLELRLPRMMGTWGLback to top mRNA from alignment at M-pyrifera_M_contig122587:2..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122587.4650.1 ID=mRNA_M-pyrifera_M_contig122587.4650.1|Name=mRNA_M-pyrifera_M_contig122587.4650.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122587:2..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122587:2..526+ >mRNA_M-pyrifera_M_contig122587.4650.1 ID=mRNA_M-pyrifera_M_contig122587.4650.1|Name=mRNA_M-pyrifera_M_contig122587.4650.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig122587:2..526+ (Macrocystis pyrifera P11B4 male)back to top |