mRNA_M-pyrifera_M_contig122581.4648.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A2E3NNZ1_9GAMM (Cytochrome_C554 domain-containing protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E3NNZ1_9GAMM) HSP 1 Score: 280 bits (717), Expect = 2.570e-88 Identity = 131/175 (74.86%), Postives = 146/175 (83.43%), Query Frame = 1
Query: 1 AAGTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
A GTSCQDCHMGT QGKVS Y GPAA IGSK TPDRKLTNHFFAGPDYS++HPGIFPHNIEA K+AT DWLKFD EAGWGTD FED+ +DYEFP+RW+AIDDRYDARAIID+Q +RL WA KR EVLRNG+GLS++ VT LKFE+DV N +GHSVPTGFDAERV+
Sbjct: 305 AEGTSCQDCHMGTVQGKVSDYAYGPAAMIGSKPTPDRKLTNHFFAGPDYSIVHPGIFPHNIEATKLATPRDWLKFDHEAGWGTDAFEDSAPDDYEFPERWRAIDDRYDARAIIDEQFERLEWARTKRLEVLRNGFGLSEVSVTRQTDRQLKFELDVKNIMNGHSVPTGFDAERVI 479
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A2E9ZXP9_9GAMM (Cytochrome_C554 domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E9ZXP9_9GAMM) HSP 1 Score: 280 bits (715), Expect = 4.350e-88 Identity = 130/173 (75.14%), Postives = 146/173 (84.39%), Query Frame = 1
Query: 7 GTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
G SCQDCHMG QGK +GYE GPAA+IGS++TP RKLTNHFFAGPDYS++HPGIFPHNIEA K+AT DWL FD EAGWGTD FED VS+DYEFP+RW+AIDDRYDARAI+DDQ +RLAWA EKR EVLRNG+GL +I VT E L+F VDV N DGHSVPTGFDAERV+
Sbjct: 300 GVSCQDCHMGKVQGKDAGYEVGPAAQIGSETTPPRKLTNHFFAGPDYSIVHPGIFPHNIEATKLATPRDWLLFDHEAGWGTDAFEDTVSDDYEFPERWRAIDDRYDARAILDDQFERLAWAREKRLEVLRNGFGLGEIEVTRQTAEQLRFAVDVKNIMDGHSVPTGFDAERVI 472
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A3D0ZVC8_9GAMM (Cytochrome_C554 domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0ZVC8_9GAMM) HSP 1 Score: 256 bits (653), Expect = 1.220e-79 Identity = 113/175 (64.57%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 1 AAGTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
AAG SCQDCHMG QG GYE GPAA++G T R+LTNHFFAGPDYS++HPG+FPH++EA +AT +WLKFD EAGWGTDEFED+V++D+EFP+ WQ +D RYDARAI+D+Q +RL WA EKR EVL++G+ LSDIRV D + FE+DV+N DGH VPTGFDAER++
Sbjct: 390 AAGISCQDCHMGVTQGLAEGYEMGPAAEVGGVPTASRRLTNHFFAGPDYSIIHPGLFPHSVEATALATQREWLKFDYEAGWGTDEFEDSVADDHEFPEPWQWVDARYDARAILDEQFERLEWAREKRLEVLKHGFELSDIRVRSADASGISFEIDVINPMDGHGVPTGFDAERLI 564
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: UPI00187B1955 (cytochrome C n=1 Tax=Sneathiella sp. P13V-1 TaxID=2697366 RepID=UPI00187B1955) HSP 1 Score: 258 bits (658), Expect = 2.010e-79 Identity = 121/175 (69.14%), Postives = 141/175 (80.57%), Query Frame = 1
Query: 1 AAGTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
+AGT+CQDCHMG QG SGY+QGPAA +G + T RKLTNH+FAGPDYS++HPGIFPHN EA KMATL DWLKFDV+AGWGTDEFED+VSED FP+RW ++DDRYDARAII+DQL L WAEEKR EVLRNGY + D+ V + F+V V N TDGH+VPTGF AER+V
Sbjct: 325 SAGTTCQDCHMGKIQGVKSGYDQGPAALVGGEPTKTRKLTNHYFAGPDYSIVHPGIFPHNAEAQKMATLRDWLKFDVDAGWGTDEFEDSVSEDAVFPERWTSVDDRYDARAIINDQLDLLGWAEEKRLEVLRNGYQIHDVAVEKASTTGVNFKVKVANGTDGHNVPTGFIAERLV 499
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A3B9QYD4_9GAMM (Cytochrome_C554 domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3B9QYD4_9GAMM) HSP 1 Score: 256 bits (653), Expect = 4.790e-78 Identity = 113/175 (64.57%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 1 AAGTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
AAG SCQDCHMG QG GYE GPAA++G T R+LTNHFFAGPDYS++HPG+FPH++EA +AT +WLKFD EAGWGTDEFED+V++D+EFP+ WQ +D RYDARAI+D+Q +RL WA EKR EVL++G+ LSDIRV D + FE+DV+N DGH VPTGFDAER++
Sbjct: 391 AAGISCQDCHMGVTQGLAEGYEMGPAAEVGGVPTASRRLTNHFFAGPDYSIIHPGLFPHSVEATALATQREWLKFDYEAGWGTDEFEDSVADDHEFPEPWQWVDARYDARAILDEQFERLEWAREKRLEVLKHGFELSDIRVRSADASGISFEIDVINPMDGHGVPTGFDAERLI 565
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A2E8VJ74_9GAMM (Cytochrome_C554 domain-containing protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8VJ74_9GAMM) HSP 1 Score: 250 bits (639), Expect = 4.310e-77 Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 1 AAGTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
A G SCQDCHMG QG+VSGYE GPAA +G T RKLTNHFFAGPDYS++HPG+FPHN EA +MAT+ +WL F + GWGTD FE+++ + YEFP+RW+A+DDRYDAR I+D Q K L WAEEKR+EVLR GY L IR+T + + LKFEVDV N TDGH VPTGFDAER+V
Sbjct: 256 AKGISCQDCHMGKVQGEVSGYEHGPAAVVGGVETAARKLTNHFFAGPDYSVIHPGLFPHNAEAAEMATMREWLTFRYKEGWGTDAFENDLPDVYEFPERWRAVDDRYDAREILDRQFKLLNWAEEKRYEVLRAGYKLGAIRITKNSQKGLKFEVDVTNGTDGHPVPTGFDAERLV 430
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A369TA90_9PROT (Cytochrome_C554 domain-containing protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TA90_9PROT) HSP 1 Score: 250 bits (638), Expect = 3.240e-76 Identity = 111/173 (64.16%), Postives = 138/173 (79.77%), Query Frame = 1
Query: 7 GTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
G +CQDCHMG EQG SGY++GPAA +G + T +RKLTNH+FAGPDY ++HPGIFPHN+EA K TL +WLKFD +AGWGTD FED++S D+EFP W +IDDRYDAR I+D+Q +RL WA ++R EVLRNG+ +SDIRV L FEVDV N T+GH+VPTGFDAER++
Sbjct: 348 GVTCQDCHMGKEQGVASGYDRGPAAVVGGEPTRERKLTNHYFAGPDYPIIHPGIFPHNVEAAKFKTLREWLKFDYKAGWGTDAFEDSISLDHEFPDAWFSIDDRYDAREILDEQFERLEWARQQRLEVLRNGFEMSDIRVVEAGVNGLSFEVDVRNPTNGHAVPTGFDAERLI 520
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A836UKP1_9BACT (Cytochrome_C554 domain-containing protein n=1 Tax=Candidatus Handelsmanbacteria bacterium TaxID=2099671 RepID=A0A836UKP1_9BACT) HSP 1 Score: 246 bits (627), Expect = 9.070e-76 Identity = 114/175 (65.14%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 AAGTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
A G +CQDCHMG EQG SGYEQGP A +G T RKLTNHFFAGPDYS++HPGIFPHN EA ++A+LA+WL+FDVEAGWGTDEFEDNV E +P+RWQAIDDRYDAR I++ Q KRL WA + R E+LRNGY + DI D + F V V N TDGH+VPTGF ER+V
Sbjct: 225 ARGVTCQDCHMGKEQGVASGYEQGPGAVVGGVPTKPRKLTNHFFAGPDYSIIHPGIFPHNAEAQQLASLAEWLRFDVEAGWGTDEFEDNVPEGKVYPERWQAIDDRYDAREILNAQFKRLEWATQMRLELLRNGYVMGDIITDRADSGGIAFRVQVRNGTDGHNVPTGFTGERLV 399
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: A0A2S6RWT3_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha9_Bin6 TaxID=2013101 RepID=A0A2S6RWT3_9PROT) HSP 1 Score: 241 bits (614), Expect = 3.440e-75 Identity = 113/175 (64.57%), Postives = 135/175 (77.14%), Query Frame = 1
Query: 1 AAGTSCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGESLKFEVDVMNKTDGHSVPTGFDAERVV 525
A G +CQDCHMG QG SGY+ GPAA +G T RKLTNHFFAGPDYSL+HPGIFPHN A +AT+ +WL+FDV+AGWGTDEFED V++D +FP+ WQ+IDDRYDAR IID QL+RLAWA E+R EVLRNGY L DI D ++F+V V + TDGH+VPTGF ER+V
Sbjct: 81 ARGETCQDCHMGKVQGVASGYDYGPAAVVGGVETMPRKLTNHFFAGPDYSLIHPGIFPHNSVAQALATMEEWLQFDVDAGWGTDEFEDTVTDDGQFPEAWQSIDDRYDARDIIDYQLERLAWATEQRLEVLRNGYILGDIVTKRADAGGIEFDVQVRSGTDGHNVPTGFTGERLV 255
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Match: UPI001585F418 (hypothetical protein n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI001585F418) HSP 1 Score: 247 bits (631), Expect = 3.720e-75 Identity = 113/172 (65.70%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 13 SCQDCHMGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNIEAVKMATLADWLKFDVEAGWGTDEFEDNVSEDYEFPKRWQAIDDRYDARAIIDDQLKRLAWAEEKRFEVLRNGYGLSDIRVTHDDGES-LKFEVDVMNKTDGHSVPTGFDAERVV 525
SCQDCHMG EQG SGYE+GPAA +G + T RKLTNH+FAGPDY ++HPG+FPHN+EA K ++ WLKFD EAGWGTDEFE+++S D EFP W AIDDRYDAR I+D+Q +RL WA ++R EVLRNG+ LSDI+VT E L FE+DV N T+GH+VPTGFDAERV+
Sbjct: 339 SCQDCHMGKEQGVPSGYERGPAAVVGGEPTKPRKLTNHYFAGPDYPIIHPGLFPHNVEAAKFKSMRQWLKFDHEAGWGTDEFEESISLDREFPDAWFAIDDRYDAREILDEQFERLEWARQERLEVLRNGFELSDIQVTESSSEDGLDFEIDVRNPTNGHAVPTGFDAERVI 510 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122581.4648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122581.4648.1 >prot_M-pyrifera_M_contig122581.4648.1 ID=prot_M-pyrifera_M_contig122581.4648.1|Name=mRNA_M-pyrifera_M_contig122581.4648.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp MGTEQGKVSGYEQGPAAKIGSKSTPDRKLTNHFFAGPDYSLLHPGIFPHNback to top mRNA from alignment at M-pyrifera_M_contig122581:2..526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122581.4648.1 ID=mRNA_M-pyrifera_M_contig122581.4648.1|Name=mRNA_M-pyrifera_M_contig122581.4648.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122581:2..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122581:2..526+ >mRNA_M-pyrifera_M_contig122581.4648.1 ID=mRNA_M-pyrifera_M_contig122581.4648.1|Name=mRNA_M-pyrifera_M_contig122581.4648.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig122581:2..526+ (Macrocystis pyrifera P11B4 male)back to top |