mRNA_M-pyrifera_M_contig122553.4642.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: UPI001580C183 (SDR family oxidoreductase n=1 Tax=Martelella limonii TaxID=1647649 RepID=UPI001580C183) HSP 1 Score: 169 bits (428), Expect = 2.260e-50 Identity = 83/123 (67.48%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 1 ALRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
AL+AS+RAS+INVGSIA RNGGA GSG+YAA K KELAGD IRVNA+APGVIETPFH+ETP A +++ IPLGRLGT +DCAW+F FLASP MSGY+TGQ+ID+NGG +MP
Sbjct: 132 ALKASDRASVINVGSIAARNGGAMGSGIYAAAKSAAHSLTRSLAKELAGDGIRVNALAPGVIETPFHDETPHAAMNAALNTIPLGRLGTAQDCAWSFAFLASPTMSGYITGQVIDINGGQYMP 254
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: UPI000D07DD55 (SDR family oxidoreductase n=1 Tax=Martelella mediterranea TaxID=293089 RepID=UPI000D07DD55) HSP 1 Score: 169 bits (427), Expect = 3.200e-50 Identity = 82/123 (66.67%), Postives = 99/123 (80.49%), Query Frame = 1
Query: 1 ALRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
AL+AS+RAS+IN+GSIAGRNGGA GSG+YAA K +E+A D +RVNA+APGVIETPFH++TP+A L++ IPLGRLG PEDCAW+FVFLASP MSGY+TGQIID+NGG MP
Sbjct: 132 ALKASDRASVINLGSIAGRNGGAPGSGIYAAAKAAVHSLTRALAREMAPDGVRVNAIAPGVIETPFHDDTPDAVLEAALNAIPLGRLGVPEDCAWSFVFLASPTMSGYITGQIIDINGGQLMP 254
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A0D5LQX7_MAREN (Oxidoreductase n=1 Tax=Martelella endophytica TaxID=1486262 RepID=A0A0D5LQX7_MAREN) HSP 1 Score: 167 bits (423), Expect = 1.290e-49 Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 1 ALRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
AL+AS RAS+IN+GSIAGRNGGA GSG+YAA K KELA D IRVNA+APGVI TPFH++TP+A L+S +IPLGRLGT ++CAW+FVF ASP MSGY+TGQI+D+NGG FMP
Sbjct: 132 ALKASERASVINLGSIAGRNGGAPGSGIYAAAKAAVHSLTRSLAKELAADGIRVNALAPGVITTPFHDDTPKANLESALASIPLGRLGTADECAWSFVFFASPTMSGYITGQILDINGGQFMP 254
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A7W6KGN6_9HYPH (3-oxoacyl-[acyl-carrier protein] reductase n=5 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7W6KGN6_9HYPH) HSP 1 Score: 165 bits (417), Expect = 1.040e-48 Identity = 80/123 (65.04%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 1 ALRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
AL+AS+RAS+IN+GSIAGRNGGA GSG+YAA K +E+A D +RVNA+APGVIETPFH+ETPE+ L++ IPL RLGT EDCAW+FVFLASP M+GY+TGQI+D+NGG MP
Sbjct: 132 ALKASDRASVINLGSIAGRNGGAPGSGLYAAAKAAVHSLTRALAREMAADGVRVNAIAPGVIETPFHDETPESALNAALAAIPLARLGTAEDCAWSFVFLASPTMAGYITGQILDINGGQLMP 254
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A1U9YYC5_9HYPH (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=4 Tax=Martelella TaxID=293088 RepID=A0A1U9YYC5_9HYPH) HSP 1 Score: 162 bits (410), Expect = 1.190e-47 Identity = 82/122 (67.21%), Postives = 96/122 (78.69%), Query Frame = 1
Query: 4 LRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
LR S+RASIIN+GSIA R+GG GSGVYAA K KELAGD IRVNA+APGVIETPFH+ETP A +++ IPLGRLGT EDCAW+FVFLASP M+G++TGQIID+NGG +MP
Sbjct: 133 LRESDRASIINLGSIAARHGGNKGSGVYAAAKAAVHSLTRSLAKELAGDGIRVNALAPGVIETPFHDETPHAAMNAALNAIPLGRLGTAEDCAWSFVFLASPTMAGFITGQIIDINGGQYMP 254
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A259KEB1_9HYPH (Oxidoreductase (Fragment) n=2 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A259KEB1_9HYPH) HSP 1 Score: 152 bits (383), Expect = 4.460e-44 Identity = 79/122 (64.75%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 4 LRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
L S +IINVGSIAGRNGGA GSG+YAA K KE A D IRVNAVAPG I TPFH TP T +++R IP+GRLGT EDCAW F FLAS +MSGY+TGQIIDVNGG FMP
Sbjct: 92 LSRSAHGAIINVGSIAGRNGGAPGSGLYAAAKAAVHSLTRSMAKEFAKDAIRVNAVAPGFISTPFHATTPLDTQEAVRKTIPMGRLGTAEDCAWIFAFLASQEMSGYITGQIIDVNGGQFMP 213
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A516H3Q8_9PROT (SDR family oxidoreductase n=1 Tax=Ferrovibrio terrae TaxID=2594003 RepID=A0A516H3Q8_9PROT) HSP 1 Score: 146 bits (369), Expect = 1.670e-41 Identity = 79/122 (64.75%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 4 LRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
L S ASIIN GSIAGRNGGA GSGVYAA K KE A IRVNA+APGVIETPFH T LDS+ IP+GRLG EDC W VFLASP +SGY+TGQIIDVNGG FMP
Sbjct: 130 LAKSAMASIINTGSIAGRNGGAPGSGVYAATKAAVHSLTRSMAKEFAPAGIRVNAIAPGVIETPFHATTSAEFLDSVCRTIPMGRLGRAEDCCWPIVFLASPMLSGYVTGQIIDVNGGQFMP 251
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A1K2I2A7_9HYPH (3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Devosia enhydra TaxID=665118 RepID=A0A1K2I2A7_9HYPH) HSP 1 Score: 139 bits (349), Expect = 1.860e-38 Identity = 68/122 (55.74%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 4 LRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
L+AS + +I+N GSIA R+GG GSG+YAA K KE A D IR NAVAPGVI TP H+ TP+A +++M I +GR GTPEDC ++FLASP ++GY+TGQIIDVNGG +MP
Sbjct: 133 LKASGKGAIVNTGSIAARHGGGRGSGLYAAAKAGVHSLTRTMAKEFAVDGIRANAVAPGVITTPLHDTTPKAAMETMLAQIVMGRFGTPEDCVGAYLFLASPTLAGYITGQIIDVNGGQYMP 254
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A858X8V5_9HYPH (SDR family oxidoreductase n=2 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858X8V5_9HYPH) HSP 1 Score: 137 bits (345), Expect = 7.220e-38 Identity = 70/123 (56.91%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 1 ALRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
ALRAS R S+IN GS+AGRNGG AGS +YAA K E A D IRVNA+APG+I TPFH TP LDS++ ++PL RLG ED +++FL S +MSGY+TG IIDVNGG MP
Sbjct: 131 ALRASGRGSVINTGSVAGRNGGRAGSSIYAAAKAAVHALSKGMAMEFAADNIRVNAIAPGLILTPFHEGTPRERLDSVKASVPLNRLGLAEDLVGSYLFLGSTQMSGYITGAIIDVNGGRLMP 253
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Match: A0A5B9DKH4_9HYPH (SDR family oxidoreductase n=2 Tax=Devosiaceae TaxID=2831106 RepID=A0A5B9DKH4_9HYPH) HSP 1 Score: 136 bits (343), Expect = 1.440e-37 Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 4 LRASNRASIINVGSIAGRNGGAAGSGVYAAVKXXXXXXXXXXXKELAGDCIRVNAVAPGVIETPFHNETPEATLDSMRLNIPLGRLGTPEDCAWTFVFLASPKMSGYLTGQIIDVNGGLFMP 369
L+AS +AS+IN GSIAGR GG +GS VYAA K +E A D IRVN VAPG I TPFH+ TPE+ ++ R IP+ RLGT EDC +VFLAS MSGY+TGQIIDVNGG MP
Sbjct: 132 LKASGKASVINTGSIAGRFGGFSGSTVYAAAKAAVHSISRNAAREFAMDGIRVNTVAPGFIITPFHDRTPESVRETARAQIPMQRLGTAEDCVGAYVFLASEAMSGYITGQIIDVNGGQLMP 253 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122553.4642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122553.4642.1 >prot_M-pyrifera_M_contig122553.4642.1 ID=prot_M-pyrifera_M_contig122553.4642.1|Name=mRNA_M-pyrifera_M_contig122553.4642.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp ALRASNRASIINVGSIAGRNGGAAGSGVYAAVKATVHSLTRSLAKELAGDback to top mRNA from alignment at M-pyrifera_M_contig122553:13..384+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122553.4642.1 ID=mRNA_M-pyrifera_M_contig122553.4642.1|Name=mRNA_M-pyrifera_M_contig122553.4642.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig122553:13..384+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122553:13..384+ >mRNA_M-pyrifera_M_contig122553.4642.1 ID=mRNA_M-pyrifera_M_contig122553.4642.1|Name=mRNA_M-pyrifera_M_contig122553.4642.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig122553:13..384+ (Macrocystis pyrifera P11B4 male)back to top |