mRNA_M-pyrifera_M_contig122417.4622.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A5A8CPU7_CAFRO (Protein YIPF n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPU7_CAFRO) HSP 1 Score: 146 bits (369), Expect = 1.550e-40 Identity = 82/158 (51.90%), Postives = 109/158 (68.99%), Query Frame = 1
Query: 1 IGRRMLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
I ++++A+++P S E +++ D+ G IL+CL LG LLL G+V FG IYGFGLVGC+ + + NL+S T GI +V SVFGY LLPIT LAAL ++ L LG V+A VAW+ + AT F++AAL +R L+AYPT LLYAVFALLAVF
Sbjct: 131 IKQKLVAIVDPRSRVNMEAVQDGDLFGPILICLALGTTLLLRGQVHFGSIYGFGLVGCLGMYLVLNLMS--TGRGIDAASVFSVFGYGLLPITVLAALSVVLPLSGALGVVVAPVCVAWSAWCATRFYEAALAMPEQRALIAYPTVLLYAVFALLAVF 286
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A7S0DM30_9EUKA (Protein YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA) HSP 1 Score: 135 bits (341), Expect = 1.400e-37 Identity = 75/158 (47.47%), Postives = 100/158 (63.29%), Query Frame = 1
Query: 1 IGRRMLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
I ++ LAV+ P+ K+E++ ++DMAG + CL LGF LLLTGKV FGYIYGFGL+GC+ + I NL+S I I S+ GYCLLPI +LAA I+F L +G + W T AT F +A L + +R L+AYP LLY+ FAL+ VF
Sbjct: 25 IWQKTLAVLVPVKELKQEIMVDADMAGPLFFCLLLGFCLLLTGKVHFGYIYGFGLIGCLGMYIILNLMS---DRSIDIYRTASILGYCLLPIVSLAAASIVFNLKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A0C9S173_AMBAM (Putative golgi membrane protein (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9S173_AMBAM) HSP 1 Score: 134 bits (338), Expect = 3.340e-37 Identity = 74/158 (46.84%), Postives = 103/158 (65.19%), Query Frame = 1
Query: 1 IGRRMLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
I ++ LAV+NP+ +L+E+D+AG ++ CL G LLLTGKV FGYIYG G++GC+A+ ++ NL+S + GIS+ VSV GYCLLP+ L+ L ILF L LG +ALA V W +A+ F AL ++ L+ YP L+Y VFALL +F
Sbjct: 19 ILQKTLAVLNPMKDPDAAILQETDLAGPLVFCLAFGGFLLLTGKVHFGYIYGIGVLGCLAMYSLLNLMS---ASGISVGCTVSVLGYCLLPMVLLSGLSILFSLKGSLGTAVALAVVVWCALSASKLFVTALSMVHQQPLVLYPCALVYGVFALLTIF 173
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: B7QHK6_IXOSC (Golgi membrane protein sb140, putative n=4 Tax=Ixodes TaxID=6944 RepID=B7QHK6_IXOSC) HSP 1 Score: 137 bits (345), Expect = 3.350e-37 Identity = 77/155 (49.68%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 10 RMLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
+ +AV+NP+ +L+ESDMAG ++ CL G LLLTGKV FGYIYG GL+GC+A+ ++ NL+S + GIS VSV GYCLLP+ L+ L ILF L LG LALA V W +A+ F AL ++ LL YP L+Y VFALL +F
Sbjct: 111 KTVAVLNPIKDPDAAILKESDMAGPLVFCLAFGGFLLLTGKVHFGYIYGIGLLGCLAMYSLLNLMS---ANGISAGCTVSVLGYCLLPMVLLSGLSILFSLKGSLGTALALAVVLWCALSASKLFVTALSMDHQQPLLLYPCSLVYGVFALLTIF 262
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A812NM95_9DINO (Protein YIPF n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NM95_9DINO) HSP 1 Score: 137 bits (345), Expect = 3.610e-37 Identity = 80/173 (46.24%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 1 IGRRMLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLL-----------TGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPG----ISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
I + L V+NP+ E +++SD+AG ++ CL LGF LL TGKV FGYIY FGL+GC AL T+ NL+S I V+SVFGYCLLPI +A L + + LG++L L AV W+TY+A FF+A H + R LLAYP+FLL+A FAL+ VF
Sbjct: 93 IKEKTLEVLNPMRPINESFMQDSDLAGPLVFCLVLGFCLLFVRAAAAQRARPTGKVHFGYIYSFGLLGCGALWTVLNLMSSTAHDSDHIPIGFTRVLSVFGYCLLPIILIAVLTVFVTMTGILGSILTLGAVGWSTYSAVRFFEATTHMREHRWLLAYPSFLLFACFALITVF 265
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A226EG30_FOLCA (Protein YIPF5 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EG30_FOLCA) HSP 1 Score: 135 bits (339), Expect = 3.830e-36 Identity = 69/152 (45.39%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 19 AVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
+V+NPL +L+++D+AG ++ C+ GF+LLL+GKVQFGYIYG G++GC+++ + N++S + G+S+ VVSV GYCLLP+ LA + +LF L +G+VL A+ W + +A+ F AL+ ++ L+AYP L+Y VFALLAVF
Sbjct: 129 SVLNPLRKTDATILQDTDLAGPVVFCVLFGFILLLSGKVQFGYIYGIGVIGCLSMYFLLNMMS---TAGVSLGIVVSVLGYCLLPMVGLAGVNLLFSLQGIVGSVLTFCAILWCSMSASKLFVTALNMNQQQPLVAYPCALVYGVFALLAVF 277
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: UPI000BA80CDC (protein YIPF5-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA80CDC) HSP 1 Score: 135 bits (339), Expect = 4.120e-36 Identity = 72/158 (45.57%), Postives = 103/158 (65.19%), Query Frame = 1
Query: 1 IGRRMLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
I ++ LAV+NP+ + +L+E+D+AG ++ C+ G LLLTGKV FGYIYG G++GC+A+ + N++S GIS+ VSV GYCLLP+ L+ + I+F L LG V+A+ V W +A+ F AL ++ L+AYP LLY VFALL VF
Sbjct: 126 IMQKTLAVLNPIKEPEASILQETDLAGPLVFCMAFGVFLLLTGKVHFGYIYGIGVLGCLAMYALLNMMS---MSGISVGCTVSVLGYCLLPMVMLSGVSIIFSLKGTLGTVIAILVVLWCALSASKLFATALVMDHQQPLVAYPCALLYGVFALLTVF 280
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A7R9A4E5_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A4E5_9CRUS) HSP 1 Score: 132 bits (333), Expect = 5.410e-36 Identity = 71/153 (46.41%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 16 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
LAV+NP+ K E+L+++D+AG + CL LG LLL GKV FGYIYG G+VGC+ + + N++S G+SI VSV GYCLLP+ ++ L ++F L +G V L +V W +++A+ F AL ++ L+AYP LLY VFALL+VF
Sbjct: 61 LAVLNPMKQTKPEILQDTDLAGPLAFCLALGAFLLLNGKVHFGYIYGIGVVGCLGMYFLLNMMS---MDGVSIGVTVSVLGYCLLPMVGVSGLAVIFTLKGGIGLVATLLSVFWCSWSASKLFVTALAMDHQQPLVAYPCALLYGVFALLSVF 210
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A1D2NC38_ORCCI (Protein YIPF5 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NC38_ORCCI) HSP 1 Score: 134 bits (337), Expect = 6.130e-36 Identity = 71/152 (46.71%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 19 AVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
+V+NPL +L+++D+AG I+ C+ GF+LLL+GKVQFGYIYG GL+GC+ + + N++S G+S+ +VSV GYCLLP+ LA + +L L +G VL AV W + +A+ F AL + ++TL+AYP L+Y VFALLAVF
Sbjct: 120 SVLNPLRTTDAAILQDTDLAGPIVFCVMFGFILLLSGKVQFGYIYGIGLIGCVGMYFLLNMMSVS---GVSLGVIVSVLGYCLLPMVGLAGVNLLLSLQGIIGTVLTALAVLWCSLSASKLFVTALAMQHQQTLVAYPCALVYGVFALLAVF 268
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A023FUW6_AMBPA (Putative rab gtpase n=11 Tax=Ixodidae TaxID=6939 RepID=A0A023FUW6_AMBPA) HSP 1 Score: 133 bits (335), Expect = 1.030e-35 Identity = 73/158 (46.20%), Postives = 103/158 (65.19%), Query Frame = 1
Query: 1 IGRRMLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 474
I ++ +AV+NP+ +L+E+D+AG ++ CL G LLLTGKV FGYIYG G++GC+A+ ++ NL+S + GIS+ VSV GYCLLP+ L+ L ILF L LG +ALA V W +A+ F AL ++ L+ YP L+Y VFALL +F
Sbjct: 107 ILQKTVAVLNPMKDPDAAILQETDLAGPLVFCLAFGGFLLLTGKVHFGYIYGIGVLGCLAMYSLLNLMS---ASGISVGCTVSVLGYCLLPMVLLSGLSILFSLKGSLGTAVALAVVVWCALSASKLFVTALSMVHQQPLVLYPCALVYGVFALLTIF 261 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122417.4622.1 >prot_M-pyrifera_M_contig122417.4622.1 ID=prot_M-pyrifera_M_contig122417.4622.1|Name=mRNA_M-pyrifera_M_contig122417.4622.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp MLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGback to top mRNA from alignment at M-pyrifera_M_contig122417:12..488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122417.4622.1 ID=mRNA_M-pyrifera_M_contig122417.4622.1|Name=mRNA_M-pyrifera_M_contig122417.4622.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=477bp|location=Sequence derived from alignment at M-pyrifera_M_contig122417:12..488+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122417:12..488+ >mRNA_M-pyrifera_M_contig122417.4622.1 ID=mRNA_M-pyrifera_M_contig122417.4622.1|Name=mRNA_M-pyrifera_M_contig122417.4622.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig122417:12..488+ (Macrocystis pyrifera P11B4 male)back to top |