mRNA_M-pyrifera_M_contig122328.4601.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A3C1KNB3_9GAMM (RND transporter (Fragment) n=1 Tax=Haliea salexigens TaxID=287487 RepID=A0A3C1KNB3_9GAMM) HSP 1 Score: 318 bits (814), Expect = 1.600e-105 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
Query: 19 QFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
QFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP
Sbjct: 253 QFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 421
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A355SRE9_9GAMM (RND family transporter n=8 Tax=Proteobacteria TaxID=1224 RepID=A0A355SRE9_9GAMM) HSP 1 Score: 318 bits (814), Expect = 9.140e-102 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
Query: 19 QFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
QFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP
Sbjct: 578 QFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 746
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A7W2YJ08_9GAMM (RND family transporter n=2 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2YJ08_9GAMM) HSP 1 Score: 298 bits (764), Expect = 3.830e-94 Identity = 156/175 (89.14%), Postives = 167/175 (95.43%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
HNS++LQF+LAAGNAGVEAATNIVIR AQ KML WVYGVVIALCLINFRSLRIT CII+PL+LTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYS+LQS+L GE L+ AYF+ALKSSGTAVAFTGLTLAVGVGTW+FSPIKFQADMG+MLTFMFFWNMIGALLFLP
Sbjct: 596 HNSDSLQFDLAAGNAGVEAATNIVIRNAQNKMLWWVYGVVIALCLINFRSLRITACIIIPLVLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSALQSHLAKGEGLQEAYFHALKSSGTAVAFTGLTLAVGVGTWIFSPIKFQADMGIMLTFMFFWNMIGALLFLP 770
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A2N5Y2E6_9GAMM (RND transporter n=2 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y2E6_9GAMM) HSP 1 Score: 290 bits (741), Expect = 6.360e-91 Identity = 151/175 (86.29%), Postives = 166/175 (94.86%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
+N++ +FE+AAGNAGVEAATNIVIR+AQTKMLLWVYGVVIALCL+NFRSL+IT CIIVPL+LTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYS+L + +R+ +LE AYFYALK SGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNM+GALLFLP
Sbjct: 572 YNTDAHRFEMAAGNAGVEAATNIVIRDAQTKMLLWVYGVVIALCLLNFRSLKITACIIVPLVLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSALLTQMRNENSLEKAYFYALKYSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMLGALLFLP 746
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A7V0ZJG1_9GAMM (RND family transporter n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A7V0ZJG1_9GAMM) HSP 1 Score: 283 bits (723), Expect = 8.590e-90 Identity = 145/175 (82.86%), Postives = 161/175 (92.00%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
HNS+ L+ +AAGNAGVEAATNIVI ++QT+MLLWVYGVVI LCLINFRS++IT CII PL+LTS+LGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYS+LQ YLR G L+ AYF AL++SGTAVAFTG TLAVGVGTW+FSPIKFQADMGLMLTFMFFWNM+GALLFLP
Sbjct: 421 HNSDELELRMAAGNAGVEAATNIVISQSQTRMLLWVYGVVILLCLINFRSVKITACIITPLVLTSILGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSALQDYLRRGAALQEAYFMALQNSGTAVAFTGFTLAVGVGTWIFSPIKFQADMGLMLTFMFFWNMLGALLFLP 595
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A095XX60_9GAMM (Transport protein n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A095XX60_9GAMM) HSP 1 Score: 286 bits (733), Expect = 1.460e-89 Identity = 153/175 (87.43%), Postives = 161/175 (92.00%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
+++ + FELAAGNAGVEAATNIVI EAQTKMLLWVYGVVI LCL+NFRSLRIT CIIVPL LTSVLGQALMA LGIGVKVATLPVIALGVGIGVDYGIYIYS+LQ YLR GE L+ AYF ALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNM+GALL LP
Sbjct: 596 YDTGAVTFELAAGNAGVEAATNIVIEEAQTKMLLWVYGVVILLCLLNFRSLRITVCIIVPLALTSVLGQALMAFLGIGVKVATLPVIALGVGIGVDYGIYIYSALQFYLRRGEPLKEAYFSALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMLGALLVLP 770
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A661H697_9GAMM (RND family transporter n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A661H697_9GAMM) HSP 1 Score: 283 bits (723), Expect = 3.930e-88 Identity = 145/175 (82.86%), Postives = 161/175 (92.00%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
HNS+ L+ +AAGNAGVEAATNIVI ++QT+MLLWVYGVVI LCLINFRS++IT CII PL+LTS+LGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYS+LQ YLR G L+ AYF AL++SGTAVAFTG TLAVGVGTW+FSPIKFQADMGLMLTFMFFWNM+GALLFLP
Sbjct: 596 HNSDELELRMAAGNAGVEAATNIVISQSQTRMLLWVYGVVILLCLINFRSVKITACIITPLVLTSILGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSALQDYLRRGAALQEAYFMALQNSGTAVAFTGFTLAVGVGTWIFSPIKFQADMGLMLTFMFFWNMLGALLFLP 770
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A2E0Z3Z6_9GAMM (RND transporter n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0Z3Z6_9GAMM) HSP 1 Score: 277 bits (708), Expect = 8.990e-86 Identity = 144/175 (82.29%), Postives = 160/175 (91.43%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
HNS+T++FELAAGNAGVEAATNIVI +AQ +ML+WVY VVI LCL+NFRSLR T CIIVPLMLTSVLGQALM ALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQ+ L +G L +YF AL+S+GTAVAFTG+TLA+GVGTW+FSPIKFQADMGLMLTFMFFWNMIGAL+ LP
Sbjct: 597 HNSDTVRFELAAGNAGVEAATNIVIEQAQLRMLVWVYSVVILLCLLNFRSLRATACIIVPLMLTSVLGQALMTALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQNNLDNGANLTQSYFRALRSTGTAVAFTGVTLAIGVGTWIFSPIKFQADMGLMLTFMFFWNMIGALVLLP 771
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A2D7WL94_9GAMM (RND transporter n=2 Tax=Spongiibacter TaxID=630749 RepID=A0A2D7WL94_9GAMM) HSP 1 Score: 277 bits (708), Expect = 9.660e-86 Identity = 143/175 (81.71%), Postives = 160/175 (91.43%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
+NSE + F LAAGNAGVEAATNIVIR AQ +ML+WVYGVVI LCL+NFRSL+IT CII+PLMLTS+LGQALMA LGIGVKVATLPVIALGVGIGVDYGIYIY++L +LR G+ L +AYF ALK+SGTAVAFTGLTLAVGVGTW++SPIKFQADMGLMLTFMFFWNM+GALL LP
Sbjct: 607 YNSEHISFRLAAGNAGVEAATNIVIRTAQNRMLIWVYGVVIVLCLLNFRSLKITACIILPLMLTSLLGQALMAMLGIGVKVATLPVIALGVGIGVDYGIYIYTALAHFLREGQDLRSAYFSALKTSGTAVAFTGLTLAVGVGTWIYSPIKFQADMGLMLTFMFFWNMVGALLVLP 781
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Match: A0A7Y1ZKC6_9GAMM (MMPL family transporter n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZKC6_9GAMM) HSP 1 Score: 270 bits (691), Expect = 1.950e-85 Identity = 141/175 (80.57%), Postives = 158/175 (90.29%), Query Frame = 1
Query: 1 HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSLRITTCIIVPLMLTSVLGQALMAALGIGVKVATLPVIALGVGIGVDYGIYIYSSLQSYLRSGETLENAYFYALKSSGTAVAFTGLTLAVGVGTWMFSPIKFQADMGLMLTFMFFWNMIGALLFLP 525
HN++ +Q+ LAAGNAGVEAATNIVI +AQ +ML WVYGVVI LCL FRSLRIT CII+PLMLTSVLG ALMA LGIGVKVATLPVIALGVGIGVDYGIYIY++LQ +LR G +L+ AYF ALK+SGTAVAFTGLTLA+GVGTW++SPIKFQADMGLMLTFMFFWNMIGAL+ LP
Sbjct: 370 HNTDDIQYLLAAGNAGVEAATNIVISQAQFQMLAWVYGVVILLCLAMFRSLRITICIILPLMLTSVLGSALMALLGIGVKVATLPVIALGVGIGVDYGIYIYNALQHFLRQGASLQQAYFEALKASGTAVAFTGLTLAIGVGTWIYSPIKFQADMGLMLTFMFFWNMIGALVLLP 544 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122328.4601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122328.4601.1 >prot_M-pyrifera_M_contig122328.4601.1 ID=prot_M-pyrifera_M_contig122328.4601.1|Name=mRNA_M-pyrifera_M_contig122328.4601.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp HNSETLQFELAAGNAGVEAATNIVIREAQTKMLLWVYGVVIALCLINFRSback to top mRNA from alignment at M-pyrifera_M_contig122328:3..527- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122328.4601.1 ID=mRNA_M-pyrifera_M_contig122328.4601.1|Name=mRNA_M-pyrifera_M_contig122328.4601.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122328:3..527- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122328:3..527- >mRNA_M-pyrifera_M_contig122328.4601.1 ID=mRNA_M-pyrifera_M_contig122328.4601.1|Name=mRNA_M-pyrifera_M_contig122328.4601.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig122328:3..527- (Macrocystis pyrifera P11B4 male)back to top |