mRNA_M-pyrifera_M_contig122218.4582.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A2D6D033_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A2D6D033_9BACT) HSP 1 Score: 211 bits (537), Expect = 1.570e-63 Identity = 97/175 (55.43%), Postives = 130/175 (74.29%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIGNNSGPFPGI 525
A+S MV+LLLD GAD+ ++SE+W GF L+++P V+E L+ GAV +VH + LGLV LR +L+++P L+ GGDG TPLHFAR + A +L+E A + RDEDHRSTPAQWRIK APEV R L+ GAEAD+F+AAGLGD++L + ++ +P C TYRIG N+GP+PGI
Sbjct: 82 ARSPAMVDLLLDAGADIGKISEFWARGFGLEEVPPRVAEHLLENGAVPSVHAASALGLVRVLRDLLDAEPGLLEAPGGDGGTPLHFARTVEIATLLIERGATLGPRDEDHRSTPAQWRIKTAPEVARLLLDNGAEADVFLAAGLGDLELARGALEANPACVTYRIGVNTGPYPGI 256
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A7Z9G1U3_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7Z9G1U3_9BACT) HSP 1 Score: 203 bits (517), Expect = 9.150e-61 Identity = 94/175 (53.71%), Postives = 130/175 (74.29%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIGNNSGPFPGI 525
A S EMV+LLL+ GA+++ V+++W GF L++IPV VS+ LI +GA +HT A LGL + + +L D +LV GGDG T LHFAR + A VLL+++A+++A D+DHRSTPAQWRIK +P+V + L+ +GA D+F+AA LGD+ L R+I+ DP+ TYRIGNNSGPFPGI
Sbjct: 50 ATSPEMVDLLLEGGANIETVTQFWANGFWLENIPVAVSQHLIGKGAEPTIHTAAALGLADIVSGLLSKDTSLVSAPGGDGATALHFARTVEVANVLLDYDANLDAWDDDHRSTPAQWRIKFSPQVAKLLLGRGAAPDLFLAAALGDLALANRVIEMDPKSVTYRIGNNSGPFPGI 224
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A2E8HMV0_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E8HMV0_9BACT) HSP 1 Score: 190 bits (482), Expect = 4.600e-56 Identity = 87/175 (49.71%), Postives = 119/175 (68.00%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIGNNSGPFPGI 525
A+S MV++LL GADV RVSEWW++G L D+ +EV+ L+ GA V AGLGL L +LE DP V +G DG P+HFAR++ TAQ+L+ H AD++ RD+DH STP QW++++ P+V L+ GAE DIF+A GLGD+ L Q+ + + PECT +RIG G +PGI
Sbjct: 47 AQSTAMVDILLQYGADVARVSEWWRSGRELGDVSLEVAAYLLRRGATVTACAAAGLGLTAELVTLLEQDPECVHSKGCDGARPIHFARNVETAQLLMAHGADVDVRDDDHHSTPTQWQVRDCPDVVATLLEAGAELDIFVAVGLGDILLVQQAVADTPECTGFRIGGMLGDYPGI 221
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A2U3LX22_9BACT (Putative Ankyrin n=1 Tax=Candidatus Sulfopaludibacter sp. SbA4 TaxID=2043165 RepID=A0A2U3LX22_9BACT) HSP 1 Score: 189 bits (481), Expect = 1.370e-55 Identity = 92/166 (55.42%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIG 498
A+S E LL +GADVD VS+WW +G D + EV+ L+ G + H AGLGLV+RLR +L +DP+L+ +GGDGCTPLHFARD+ATA +LLEH A + ARDEDH STP QWRI APEV+RFL+ +GA DIF+AA L D L + LI D C +RIG
Sbjct: 45 ARSAATAEWLLARGADVDAVSKWWASGLGADCVAPEVARLLVERGTGLTPHAAAGLGLVDRLREMLTADPSLIDAKGGDGCTPLHFARDVATAALLLEHGARVEARDEDHDSTPVQWRIGAAPEVSRFLLERGATPDIFLAAALDDRALAEILIHRDRACLAHRIG 210
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A2V8U5N8_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8U5N8_9BACT) HSP 1 Score: 190 bits (483), Expect = 1.760e-54 Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIG 498
A+S+ E LL GADV+ VS WW G + + EV L+ GA + HT AGLGL + L +L +DP+L+ +GGDGCTPLHF+RD+ TA++L+E A ++ARDEDH STPAQW I EAPEV RFL+ GA +DIF+AA LGD L ++LID +P C +RIG
Sbjct: 44 ARSIATAERLLSMGADVEAVSNWWAPGMYTRRVVAEVGRFLVEHGAKLTPHTAAGLGLTDHLAEMLNADPSLIDAKGGDGCTPLHFSRDVVTARLLIERGARVDARDEDHESTPAQWLIGEAPEVARFLLEHGAASDIFLAAALGDRGLAEKLIDANPGCLAHRIG 209
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A2E7JNM1_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E7JNM1_9BACT) HSP 1 Score: 181 bits (460), Expect = 2.090e-52 Identity = 90/175 (51.43%), Postives = 116/175 (66.29%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIGNNSGPFPGI 525
A+S +V++L++ GAD V EWW GF L + V+ L+A GA + H AGLGL L +L + ALV GGDG PLHFAR A++LLE AD++ARD+DHRSTPAQW I +AP+V L+A GAE DIF+AA +G + +RLIDE+ CT +RIG N GPFPGI
Sbjct: 49 ARSTAVVDVLIELGADPALVGEWWGPGFGLRGVDPAVAAALVARGAKLTPHAAAGLGLEAHLGEMLGRESALVGAAGGDGGHPLHFARTPEIARLLLEKGADVDARDDDHRSTPAQWLIGDAPDVVATLLAAGAEDDIFLAAAMGSCERVERLIDENASCTAHRIGYNDGPFPGI 223
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A7S7NX55_9BACT (Ankyrin repeat domain-containing protein n=1 Tax=Paludibaculum fermentans TaxID=1473598 RepID=A0A7S7NX55_9BACT) HSP 1 Score: 181 bits (458), Expect = 6.880e-51 Identity = 88/166 (53.01%), Postives = 114/166 (68.67%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIG 498
A+S+ LL GA++D VS+WW G I V L+ +GA + VH AGLGLV+ L +L++D +LV +G D CTPLHFARD+ TAQ+LL H A I+ARD+DH STPAQW I +APEV+RFL+ QGA DIF+AA LGD +L + LI DP+C +RIG
Sbjct: 44 ARSLNTAHRLLRLGAELDAVSKWWAGGMGTVQIDPAVGRFLVDQGAQLTVHVAAGLGLVDPLARMLDADASLVDAKGMDNCTPLHFARDVETAQLLLTHGARIDARDQDHSSTPAQWLIGDAPEVSRFLLTQGATPDIFLAAALGDRNLAESLIRSDPDCVAHRIG 209
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A2T6CWR8_9BACT (Uncharacterized protein n=1 Tax=Opitutus sp. ER46 TaxID=2161864 RepID=A0A2T6CWR8_9BACT) HSP 1 Score: 166 bits (419), Expect = 1.110e-45 Identity = 80/165 (48.48%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 4 KSVEMVELLLDQGADVDRVSEWWKAGFHL-DDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRI 495
+S EM+++LLD GA +D S+WW GF L E++ +A GA ++VH A LGL + LR L +DPALV GGDG TPLHFAR +A A++LL H ADI+A D DH STPAQ+ +++ P+V R+L+ +G DI +AA LGD +L +R +D DP C R+
Sbjct: 136 RSREMLDVLLDAGAQLDVRSQWWAGGFGLLHTAEPELAHYALARGATLDVHAAARLGLTDSLRTFLAADPALVHARGGDGQTPLHFARTVAFAELLLNHGADIDAADLDHASTPAQYMVRDRPDVARYLVQRGCRTDILLAAALGDANLVRRHLDADPNCIRTRV 300
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A7C3JQW4_9DELT (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JQW4_9DELT) HSP 1 Score: 163 bits (413), Expect = 2.470e-45 Identity = 79/175 (45.14%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 1 AKSVEMVELLLDQGADVDRVSEWWKAGFHL-DDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIGNNSGPFPG 522
A+S EM+++L++ GAD++ S WW GF L ++++ IA GA V+VH A LGL++ LRA++ + P LV GGDG TPLHFA I A+ LL+H A+I+ RD DH STPAQ+ + E+ RFL+ +G DI MAA LGD +L + +D DPEC R+ + P G
Sbjct: 136 ARSREMIDVLVEAGADINAKSNWWAGGFGLLHSAKPDLAQHAIARGARVDVHAAARLGLIDELRALISARPELVNERGGDGQTPLHFASTIEVARFLLDHGAEIDPRDVDHESTPAQYMTGDRKEIARFLVQRGCTTDILMAAALGDAELARHHLDRDPECVRVRVSDEYFPMVG 310
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Match: A0A7V9I1B9_9BACT (Ankyrin repeat domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9I1B9_9BACT) HSP 1 Score: 161 bits (407), Expect = 9.190e-45 Identity = 81/173 (46.82%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 4 KSVEMVELLLDQGADVDRVSEWWKAGFHL-DDIPVEVSERLIAEGAVVNVHTLAGLGLVERLRAVLESDPALVCVEGGDGCTPLHFARDIATAQVLLEHEADINARDEDHRSTPAQWRIKEAPEVTRFLIAQGAEADIFMAAGLGDVDLTQRLIDEDPECTTYRIGNNSGPFP 519
+S EM++ LL+ GAD++ S WW GF L D E++ I GAVV+ H A LG+++RLR ++ DP++V GGDG TPLHFAR A+ LLE ADI+ARD DH STPAQ +KE +V R+L+++G D+ MA+ LGD+DL +R ++ DP C R+ N+ FP
Sbjct: 48 RSREMLDALLEAGADINARSRWWAGGFGLLDSADPELAAYAIERGAVVDAHAAARLGMLDRLRELVSRDPSMVHAGGGDGQTPLHFARTTEVARHLLECGADIDARDVDHESTPAQHMVKERQDVARYLVSRGCRTDLLMASALGDLDLARRHLEADPRCIRMRV--NAEWFP 218 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122218.4582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122218.4582.1 >prot_M-pyrifera_M_contig122218.4582.1 ID=prot_M-pyrifera_M_contig122218.4582.1|Name=mRNA_M-pyrifera_M_contig122218.4582.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp MVELLLDQGADVDRVSEWWKAGFHLDDIPVEVSERLIAEGAVVNVHTLAGback to top mRNA from alignment at M-pyrifera_M_contig122218:5..529+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122218.4582.1 ID=mRNA_M-pyrifera_M_contig122218.4582.1|Name=mRNA_M-pyrifera_M_contig122218.4582.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122218:5..529+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122218:5..529+ >mRNA_M-pyrifera_M_contig122218.4582.1 ID=mRNA_M-pyrifera_M_contig122218.4582.1|Name=mRNA_M-pyrifera_M_contig122218.4582.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig122218:5..529+ (Macrocystis pyrifera P11B4 male)back to top |