mRNA_M-pyrifera_M_contig122121.4550.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A7Y2IHH0_9ACTN (DUF268 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IHH0_9ACTN) HSP 1 Score: 168 bits (425), Expect = 9.050e-49 Identity = 83/138 (60.14%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 1 YPFSHPNLTVFERPFEELERNSDFDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSIDRVNIAHRTDSCTWTLESTTLEPPRGPGRVVMLTARP 414
YPF HPNL V P E+L FDAV+LLSTIEHFGIG Y G P E ADL +K++ ++L P GLL LT PYGPA+ NELER YDL+RL LLEGW I I R D+ TW LES L P GPGRV MLTARP
Sbjct: 186 YPFEHPNLEVLLHPLEDLPPGRTFDAVVLLSTIEHFGIGHYSGGPEPDEDADLAAMKLVAKLLSPNGLLSLTVPYGPAEVNELERIYDLERLQRLLEGWDILDARIGRRADATTWVLESNELSSPSGPGRVAMLTARP 323
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A7Y2DML4_9ACTN (DUF268 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DML4_9ACTN) HSP 1 Score: 154 bits (390), Expect = 2.050e-43 Identity = 73/138 (52.90%), Postives = 91/138 (65.94%), Query Frame = 1
Query: 1 YPFSHPNLTVFERPFEELERNSDFDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSIDRVNIAHRTDSCTWTLESTTLEPPRGPGRVVMLTARP 414
YPF+HP L V + P EEL + DFDA +LLS IEHFGIG Y+G P AD + + ++LKP G+LVLT PYGPA+ NELER YD +RL LLEGW++ R + RT TW +E+ L PP GPG V M+ A P
Sbjct: 199 YPFAHPRLDVRQHPLEELTADGDFDAAVLLSAIEHFGIGHYKGGPEPDIDADRKAMSHVKKLLKPNGILVLTVPYGPAETNELERIYDRERLSNLLEGWTVLRARVGRRTTETTWEIEAEELIPPAGPGHVAMVVASP 336
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A349B7A5_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B7A5_9ACTN) HSP 1 Score: 141 bits (356), Expect = 2.590e-38 Identity = 74/146 (50.68%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 1 YPFSHPNLTVFERPFEELERNSDFDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSIDRVNIAHRTDSCTWTLESTT------LEPPRGPGRVVMLTARPVA 420
YP+ HPNLTV E EE E ++ DAVILLS IEHFGIGAY N ADL +K++ ++L P G++VLTTP+GP+ NELERTYD++RL L EG+ I+ V IA R D+ TWT+ +T + P PG V M+ AR A
Sbjct: 196 YPYEHPNLTVNEATLEEYEPDAPVDAVILLSAIEHFGIGAYANNGELDADADLAAMKVVRDLLAPDGIVVLTTPFGPSAVNELERTYDVERLGSLFEGYRIEEVVIASRQDATTWTVTTTAGSLDDGITTPGAPGHVAMVRARRTA 341
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A7W1ENT8_9BACT (Class I SAM-dependent methyltransferase (Fragment) n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A7W1ENT8_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 1.960e-21 Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 1 YPFSHPNLTVFERPFEELERNSD-FDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSI-DRVNIAHRTDSCTWT 348
YPF+HPNL V + P E+ D +DA +L+ST+EH G+G Y P A + D L + EV++PGG++V+T PYG A+ E++R YD L LLEG I DRV + R TWT
Sbjct: 231 YPFTHPNLDVVQEPLEDATLEPDTYDAALLISTVEHVGLGWYGERPGAYD--DRRALARIAEVVRPGGIVVVTVPYGTAEVTEVQRIYDAPGLDALLEGLEIVDRVIVEER--DATWT 344
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A7W0RWD4_9ACTN (DUF268 domain-containing protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W0RWD4_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 6.590e-15 Identity = 52/138 (37.68%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 1 YPFSHPNLTVFERPFEELERNSD-FDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSIDRVNIAHRTDSCTWTLESTTLEPPRGPGRVVMLTAR 411
+P +HP L +EL+ + FDA ++LS +EHFG+ Y G + E D+ L L E++ PGG LVLT P+G + +R YD L LL GW I+ RTD TW L + P R V ++TAR
Sbjct: 168 HPLAHPRLRHAACRLDELDTPAQLFDAAVVLSAVEHFGLEHY-GVGGSDERLDVAALVRLRELVAPGGQLVLTVPFGAPSVDAFQRVYDEAGLAELLTGWRIETSLRVGRTDRHTWELGA----PSREGHGVALVTAR 300
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A2W5XNJ4_9BACT (Methyltransf_11 domain-containing protein n=1 Tax=Candidatus Eremiobacter sp. RRmetagenome_bin22 TaxID=2599629 RepID=A0A2W5XNJ4_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 1.560e-12 Identity = 46/119 (38.66%), Postives = 59/119 (49.58%), Query Frame = 1
Query: 1 YPFSHPNLTVFERPFEE--LERNSDFDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSIDRVNIAHRTDSCTWTL 351
YP HPNL + LER S FD ILLSTIEH G+G Y + A + + L LKPGGLL++T P+G L R +D L LL + +D + + D TW L
Sbjct: 194 YPLRHPNLRFIQGDVMTVPLERES-FDGAILLSTIEHIGLGWYGDEVGDHQAAVMTRIHHL---LKPGGLLLVTVPFGRPAVTPLHRIFDSSTLSRLLSQFRLDNLEYGIKVDEKTWLL 308
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A1F9X9I3_9BACT (Methyltransf_11 domain-containing protein n=1 Tax=Elusimicrobia bacterium RIFOXYB2_FULL_48_7 TaxID=1797967 RepID=A0A1F9X9I3_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 4.590e-12 Identity = 39/114 (34.21%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 4 PFSHPNLTVFERPFEELERNSDFDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSIDRVNIAHRTDSCTW 345
PF+ +++ FE N+ FD V+ +STIEH G+GAY A+E +L + + +LKPGG L++T P+G + R YD + L LL+ + +++V ++ D TW
Sbjct: 108 PFTFTKQDIYKTDFE----NNYFDCVVSVSTIEHIGLGAY--GDIASEGKELPVIDEIYRILKPGGKLIVTLPFGIRSTGKTLRIYDQESLDTLLKKFQVEKVKYYYK-DKNTW 214
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A0F9SVA8_9ZZZZ (Methyltransf_11 domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9SVA8_9ZZZZ) HSP 1 Score: 68.9 bits (167), Expect = 2.390e-11 Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 7 FSHPNLTVFERPFEELERNSD-FDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSIDRVNIAHRT 330
F H NL + F ++ S+ FD I +S +EH G+ AY P E D ++ + +LK GG L+LT P+G A N+ ER YD L+ L++ + ID I R+
Sbjct: 113 FKHKNLEFIQGNFFNIDLPSESFDCAICISVVEHIGLPAYNIKPF--ENGDKKAIEKIYTLLKKGGKLILTVPFGKAIINQFERNYDQKSLNQLIKKFKIDEFKIFERS 219
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A662TVB6_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A662TVB6_9EURY) HSP 1 Score: 67.8 bits (164), Expect = 6.120e-11 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 1
Query: 1 YPFSHPNLTVFERPF--EELERNSDFDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQ--NELERTYDLDRLHLLLEGWSI 303
YP SHPNLT+ + F LE ++ FD VIL+STIEH G+G Y G P + AD +K + +L G +++T P+ ++ + ER Y +R+ L EGW +
Sbjct: 85 YPESHPNLTIIQGDFLNNHLE-SASFDLVILISTIEHIGLGGY-GAPEYPD-ADFRVMKEVYRILTDEGKVIVTFPFNKRERVIPQFERWYTPERVRRLFEGWYV 186
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Match: A0A534M021_9EURY (Class I SAM-dependent methyltransferase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534M021_9EURY) HSP 1 Score: 66.2 bits (160), Expect = 2.830e-10 Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 58 RNSDFDAVILLSTIEHFGIGAYRGNPAAAETADLDTLKILPEVLKPGGLLVLTTPYGPADQNELERTYDLDRLHLLLEGWSID 306
R FDA +++ST+EH GIG Y A+ D + L +++PGG L+LT P+G ++R YD +RL + EGW+I+
Sbjct: 128 RTDSFDAAVMVSTLEHVGIGWYDDRTDPAD--DQRIMGNLRTLVRPGGSLLLTVPFGRGGVGRIQRAYDDERLRTITEGWTIE 208 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122121.4550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122121.4550.1 >prot_M-pyrifera_M_contig122121.4550.1 ID=prot_M-pyrifera_M_contig122121.4550.1|Name=mRNA_M-pyrifera_M_contig122121.4550.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp YPFSHPNLTVFERPFEELERNSDFDAVILLSTIEHFGIGAYRGNPAAAETback to top mRNA from alignment at M-pyrifera_M_contig122121:104..529- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122121.4550.1 ID=mRNA_M-pyrifera_M_contig122121.4550.1|Name=mRNA_M-pyrifera_M_contig122121.4550.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig122121:104..529- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122121:104..529- >mRNA_M-pyrifera_M_contig122121.4550.1 ID=mRNA_M-pyrifera_M_contig122121.4550.1|Name=mRNA_M-pyrifera_M_contig122121.4550.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig122121:104..529- (Macrocystis pyrifera P11B4 male)back to top |