mRNA_M-pyrifera_M_contig122053.4545.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A0V0XUB3_TRIPS (Thioredoxin-like protein n=2 Tax=Ecdysozoa TaxID=1206794 RepID=A0A0V0XUB3_TRIPS) HSP 1 Score: 199 bits (506), Expect = 3.030e-63 Identity = 87/135 (64.44%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
M+++LP +GW+VD+AI+SE++RVVVIRFG W+PTCM DE L KIAEKVK FAVIYLVD ++V DFN+MYEL DPC+ MFF RNK +M+DLGTG+NN++N+ + +P E ID++ET+YRG KG+GLVISPKD
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLFKIAEKVKNFAVIYLVDITQVPDFNKMYELYDPCTTMFFFRNKHIMIDLGTGNNNKINWALEDPQECIDIIETIYRGARKGRGLVISPKD 135
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A6A0HGR7_HYAAZ (Thioredoxin-like protein n=2 Tax=Pancrustacea TaxID=197562 RepID=A0A6A0HGR7_HYAAZ) HSP 1 Score: 198 bits (503), Expect = 8.660e-63 Identity = 86/135 (63.70%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
M+++L +GW+VD+AI+SE++R VVIRFG W+P CMV DE L IAEKVK FAVIYLVD +EV DFN+MYEL DPC++MFF RNK +M+DLGTG+NN++N+P+ +P E ID+LET+YRG KG+GLV+SPKD
Sbjct: 1 MSYMLQHLHNGWQVDQAILSEEDRCVVIRFGHDWDPQCMVMDEVLYNIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTIMFFFRNKHIMIDLGTGNNNKINWPLEDPQEMIDILETVYRGARKGRGLVVSPKD 135
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A7S4LMZ2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LMZ2_9EUGL) HSP 1 Score: 198 bits (503), Expect = 1.020e-62 Identity = 90/135 (66.67%), Postives = 111/135 (82.22%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
MA+LLP SGW VD+AI++E+E+VVVIRFG W+P CM DE LA IAEKVK FAV+YLVD SEV DFN+MYEL DP +VMFF RNK MM+DLGTG+NN++N+P++ E ID++ET+YRG KG+GLVISPKD
Sbjct: 6 MAYLLPHLHSGWAVDQAILAEEEKVVVIRFGHDWDPQCMEMDETLASIAEKVKNFAVVYLVDISEVPDFNKMYELYDPVTVMFFFRNKHMMIDLGTGNNNKINWPMNNKQEMIDIVETVYRGARKGRGLVISPKD 140
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: U6J310_ECHGR (Thioredoxin-like protein n=75 Tax=Bilateria TaxID=33213 RepID=U6J310_ECHGR) HSP 1 Score: 197 bits (502), Expect = 1.230e-62 Identity = 84/135 (62.22%), Postives = 115/135 (85.19%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
M+++L +GW+VD+AI+SE++RVV+IRFG W+P+CMV DE L ++AEK+K FAVIYLVD S+V DFN+MYEL DPC+VMFF RNK +M+DLGTG+NN++N+PI + E+ID++ET+YRG KG+GLV+SPKD
Sbjct: 1 MSYMLAHLTNGWQVDQAILSEEDRVVIIRFGHDWDPSCMVMDETLFQVAEKIKNFAVIYLVDISQVPDFNKMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWPIEDKQEFIDIVETVYRGARKGRGLVVSPKD 135
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A183J7V8_9BILA (Thioredoxin-like protein n=17 Tax=Dorylaimia TaxID=1457286 RepID=A0A183J7V8_9BILA) HSP 1 Score: 197 bits (501), Expect = 1.750e-62 Identity = 86/135 (63.70%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
M+++LP +GW+VD+AI+SE++RVVVIRFG W+PTCM DE L KIAEKVK FA +YLVD S+V DFN+MYEL DPC++MFF RNK +M+DLGTG+NN++N+ + +P E ID++ET+YRG KG+GLVISPKD
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDETLFKIAEKVKNFASVYLVDISQVQDFNKMYELYDPCTLMFFFRNKHIMIDLGTGNNNKINWALEDPQEAIDIIETVYRGARKGRGLVISPKD 135
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A6J0HQR1_9PASS (thioredoxin-like protein 4A isoform X2 n=1 Tax=Lepidothrix coronata TaxID=321398 RepID=A0A6J0HQR1_9PASS) HSP 1 Score: 198 bits (503), Expect = 2.790e-62 Identity = 87/136 (63.97%), Postives = 113/136 (83.09%), Query Frame = 1
Query: 49 RMAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
RM+++LP +GW+VD+AI+SE++RVVVIRFG W+PTCM DE L IAEKVK FAVIYLVD +EV DFN+MYEL DPC+VMFF RNK +M+DLGTG+NN++N+ + + E ID++ET+YRG KG+GLV+SPKD
Sbjct: 36 RMSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKD 171
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A6J0HRV9_9PASS (thioredoxin-like protein 4A isoform X1 n=6 Tax=Pipridae TaxID=114313 RepID=A0A6J0HRV9_9PASS) HSP 1 Score: 198 bits (503), Expect = 3.170e-62 Identity = 87/136 (63.97%), Postives = 113/136 (83.09%), Query Frame = 1
Query: 49 RMAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
RM+++LP +GW+VD+AI+SE++RVVVIRFG W+PTCM DE L IAEKVK FAVIYLVD +EV DFN+MYEL DPC+VMFF RNK +M+DLGTG+NN++N+ + + E ID++ET+YRG KG+GLV+SPKD
Sbjct: 40 RMSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKD 175
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: Q8SZ87_DROME (Thioredoxin-like protein n=95 Tax=Bilateria TaxID=33213 RepID=Q8SZ87_DROME) HSP 1 Score: 196 bits (499), Expect = 3.520e-62 Identity = 85/135 (62.96%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
M+++LP +GW+VD+AI+SE++RVVVIRFG W+P CM DE + IAEKVK FAVIYLVD +EV DFN+MYEL DPC+VMFF RNK +M+DLGTG+NN++N+P+ + E ID++ET+YRG KG+GLV+SPKD
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPACMKMDEVMYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIVETVYRGARKGRGLVVSPKD 135
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A182G8J6_AEDAL (Thioredoxin-like protein n=15 Tax=Endopterygota TaxID=33392 RepID=A0A182G8J6_AEDAL) HSP 1 Score: 196 bits (499), Expect = 3.520e-62 Identity = 86/135 (63.70%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
M+++L +GW+VD+AI+SE++RVVVIRFG W+PTCM DE L IAEKVK FAVIYLVD +EV DFN+MYEL DPC+VMFF RNK +M+DLGTG+NN++N+P+ + E ID++ET+YRG KG+GLV+SPKD
Sbjct: 1 MSYMLAHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWPLEDKQEMIDIIETVYRGARKGRGLVVSPKD 135
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Match: A0A0L8H9X6_OCTBM (Thioredoxin-like protein n=22 Tax=Protostomia TaxID=33317 RepID=A0A0L8H9X6_OCTBM) HSP 1 Score: 196 bits (499), Expect = 3.520e-62 Identity = 85/135 (62.96%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 52 MAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAWEPTCMVNDEALAKIAEKVKKFAVIYLVDNSEVTDFNEMYELTDPCSVMFFVRNKQMMVDLGTGDNNRVNFPISEPSEWIDLLETLYRGGNKGKGLVISPKD 456
M+++LP +GW+VD+AI+SE++RVVVIRFG W+PTCMV DE L K AEK+K F VIYLVD +EV DFN+MYEL DPC+VMFF RNK +M+DLGTG+NN++N+ + + E+ID++ET+YRG KG+GLV+SPKD
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMVMDEVLYKCAEKIKNFVVIYLVDITEVPDFNKMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWALEDCQEFIDIVETVYRGARKGRGLVVSPKD 135 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122053.4545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122053.4545.1 >prot_M-pyrifera_M_contig122053.4545.1 ID=prot_M-pyrifera_M_contig122053.4545.1|Name=mRNA_M-pyrifera_M_contig122053.4545.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp MQSQSKLALRCSLMQNRMAFLLPTCKSGWEVDKAIISEDERVVVIRFGRAback to top mRNA from alignment at M-pyrifera_M_contig122053:2..457- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122053.4545.1 ID=mRNA_M-pyrifera_M_contig122053.4545.1|Name=mRNA_M-pyrifera_M_contig122053.4545.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig122053:2..457- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122053:2..457- >mRNA_M-pyrifera_M_contig122053.4545.1 ID=mRNA_M-pyrifera_M_contig122053.4545.1|Name=mRNA_M-pyrifera_M_contig122053.4545.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig122053:2..457- (Macrocystis pyrifera P11B4 male)back to top |